RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 SPTY2D1Q68D10 685 aaPredicted RBP16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 ERICH6Q7L0X2 663 aa16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 SKAP1Q86WV1 359 aa16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 OGFOD1Q8N543 542 aa16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 FAM163AQ96GL9 167 aaPredicted RBP16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 GPATCH3Q96I76 525 aa16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 PRMT6Q96LA8 375 aaPredicted RBP16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 DNAJC2Q99543 621 aaKnown RBP16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 GLIS2Q9BZE0 524 aaPredicted RBP16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 PAG1Q9NWQ8 432 aa16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 HDAC9Q9UKV0 1011 aa16.22■□□□□ 0.19
CHAF1A-202ENST00000585371 GAKO14976 1311 aa16.21■□□□□ 0.19
CHAF1A-202ENST00000585371 MAST3O60307 1309 aa16.21■□□□□ 0.19
CHAF1A-202ENST00000585371 SPDYE2BA6NHP3 402 aa16.21■□□□□ 0.19
CHAF1A-202ENST00000585371 SPDYE6P0CI01 402 aa16.21■□□□□ 0.19
CHAF1A-202ENST00000585371 APOBEC3HQ6NTF7 200 aaKnown RBP16.21■□□□□ 0.19
CHAF1A-202ENST00000585371 HHIPL2Q6UWX4 724 aa16.21■□□□□ 0.19
CHAF1A-202ENST00000585371 ZDHHC15Q96MV8 337 aa16.21■□□□□ 0.19
CHAF1A-202ENST00000585371 DAGLAQ9Y4D2 1042 aa16.21■□□□□ 0.19
CHAF1A-202ENST00000585371 FOCADQ5VW36 1801 aa16.21■□□□□ 0.19
CHAF1A-202ENST00000585371 ERC2O15083 957 aa16.2■□□□□ 0.18
CHAF1A-202ENST00000585371 CA12O43570 354 aa16.2■□□□□ 0.18
CHAF1A-202ENST00000585371 IGSF3O75054 1194 aa16.2■□□□□ 0.18
CHAF1A-202ENST00000585371 LRP2BPQ9P2M1 347 aa16.2■□□□□ 0.18
CHAF1A-202ENST00000585371 MAP4K4O95819 1239 aaPredicted RBP16.19■□□□□ 0.18
CHAF1A-202ENST00000585371 CHGBP05060 677 aa16.19■□□□□ 0.18
CHAF1A-202ENST00000585371 TTF1Q15361 905 aaPredicted RBP16.19■□□□□ 0.18
CHAF1A-202ENST00000585371 DLGAP5Q15398 846 aa16.19■□□□□ 0.18
CHAF1A-202ENST00000585371 ADGRA1Q86SQ6 560 aa16.19■□□□□ 0.18
CHAF1A-202ENST00000585371 DZIP1Q86YF9 867 aaKnown RBP16.19■□□□□ 0.18
CHAF1A-202ENST00000585371 TEKT1Q969V4 418 aa16.19■□□□□ 0.18
CHAF1A-202ENST00000585371 ZNF408Q9H9D4 720 aa16.19■□□□□ 0.18
CHAF1A-202ENST00000585371 RAI14Q9P0K7 980 aa16.19■□□□□ 0.18
CHAF1A-202ENST00000585371 MROH7-TTC4A0A0A0MT08 1334 aa16.19■□□□□ 0.18
CHAF1A-202ENST00000585371 TCRBV5S4A2TA0A5A2 114 aa16.18■□□□□ 0.18
CHAF1A-202ENST00000585371 AOC2O75106 756 aa16.18■□□□□ 0.18
CHAF1A-202ENST00000585371 IDH1O75874 414 aaKnown RBP16.18■□□□□ 0.18
CHAF1A-202ENST00000585371 SLFNL1Q499Z3 407 aa16.18■□□□□ 0.18
CHAF1A-202ENST00000585371 KBTBD3Q8NAB2 608 aa16.18■□□□□ 0.18
CHAF1A-202ENST00000585371 ABHD8Q96I13 439 aa16.18■□□□□ 0.18
CHAF1A-202ENST00000585371 GPR75-ASB3A0A0A6YYF3 556 aa16.17■□□□□ 0.18
CHAF1A-202ENST00000585371 PDE6AP16499 860 aa16.17■□□□□ 0.18
CHAF1A-202ENST00000585371 ADD2P35612 726 aa16.17■□□□□ 0.18
CHAF1A-202ENST00000585371 NAA16Q6N069 864 aaPredicted RBP16.17■□□□□ 0.18
CHAF1A-202ENST00000585371 TDRD3Q9H7E2 651 aaKnown RBP16.17■□□□□ 0.18
CHAF1A-202ENST00000585371 GGA3Q9NZ52 723 aa16.17■□□□□ 0.18
CHAF1A-202ENST00000585371 PITPNM2Q9BZ72 1349 aa16.17■□□□□ 0.18
CHAF1A-202ENST00000585371 RFX7Q2KHR2 1363 aa16.16■□□□□ 0.18
CHAF1A-202ENST00000585371 GSPT1P15170 499 aaKnown RBP16.16■□□□□ 0.18
CHAF1A-202ENST00000585371 RBM5P52756 815 aaKnown RBP eCLIP16.16■□□□□ 0.184e-6■■□□□ 12.4
CHAF1A-202ENST00000585371 RHBDL3P58872 404 aa16.16■□□□□ 0.18
CHAF1A-202ENST00000585371 MAP3K12Q12852 859 aa16.16■□□□□ 0.18
CHAF1A-202ENST00000585371 SPDYE2Q495Y8 402 aa16.16■□□□□ 0.18
CHAF1A-202ENST00000585371 ANGEL2Q5VTE6 544 aaKnown RBP16.16■□□□□ 0.18
CHAF1A-202ENST00000585371 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
CHAF1A-202ENST00000585371 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
CHAF1A-202ENST00000585371 ZNF70Q9UC06 446 aaPredicted RBP16.16■□□□□ 0.18
CHAF1A-202ENST00000585371 CLRN2A0PK11 232 aa16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 LDHCP07864 332 aa16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 CYP7A1P22680 504 aa16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 GSTO1P78417 241 aa16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 NOGQ13253 232 aa16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 TTC22Q5TAA0 569 aa16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 CDC42EP5Q6NZY7 148 aa16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 TMED8Q6PL24 325 aaPredicted RBP16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 KRT26Q7Z3Y9 468 aa16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 SLF2Q8IX21 1173 aa16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 DCPSQ96C86 337 aaKnown RBP16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 ZNF532Q9HCE3 1301 aa16.15■□□□□ 0.18
CHAF1A-202ENST00000585371 BTDP43251 543 aa16.14■□□□□ 0.17
CHAF1A-202ENST00000585371 HUNKP57058 714 aa16.14■□□□□ 0.17
CHAF1A-202ENST00000585371 PPP4CP60510 307 aa16.14■□□□□ 0.17
CHAF1A-202ENST00000585371 SLC9C2Q5TAH2 1124 aa16.14■□□□□ 0.17
CHAF1A-202ENST00000585371 DLK2Q6UY11 383 aa16.14■□□□□ 0.17
CHAF1A-202ENST00000585371 EVI5LQ96CN4 794 aa16.14■□□□□ 0.17
CHAF1A-202ENST00000585371 SCAF8Q9UPN6 1271 aaKnown RBP16.14■□□□□ 0.17
CHAF1A-202ENST00000585371 DDX60LQ5H9U9 1706 aaKnown RBP16.14■□□□□ 0.17
CHAF1A-202ENST00000585371 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
CHAF1A-202ENST00000585371 C2orf69Q8N8R5 385 aa16.13■□□□□ 0.17
CHAF1A-202ENST00000585371 RIOK1Q9BRS2 568 aaKnown RBP16.13■□□□□ 0.17
CHAF1A-202ENST00000585371 MYH1P12882 1939 aa16.13■□□□□ 0.17
CHAF1A-202ENST00000585371 SIPA1L1O43166 1804 aa16.12■□□□□ 0.17
CHAF1A-202ENST00000585371 ADM5C9JUS6 153 aa16.12■□□□□ 0.17
CHAF1A-202ENST00000585371 WDHD1O75717 1129 aaPredicted RBP16.12■□□□□ 0.17
CHAF1A-202ENST00000585371 CACNB3P54284 484 aa16.12■□□□□ 0.17
CHAF1A-202ENST00000585371 DYNLL1P63167 89 aaKnown RBP16.12■□□□□ 0.17
CHAF1A-202ENST00000585371 GBA2Q9HCG7 927 aaPredicted RBP16.12■□□□□ 0.17
CHAF1A-202ENST00000585371 USP40Q9NVE5 1235 aa16.12■□□□□ 0.17
CHAF1A-202ENST00000585371 AATFQ9NY61 560 aaKnown RBP eCLIP16.12■□□□□ 0.17
CHAF1A-202ENST00000585371 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
CHAF1A-202ENST00000585371 RNF113AO15541 343 aaKnown RBP16.11■□□□□ 0.17
CHAF1A-202ENST00000585371 MYO1BO43795 1136 aa16.11■□□□□ 0.17
CHAF1A-202ENST00000585371 SDSP20132 328 aa16.11■□□□□ 0.17
CHAF1A-202ENST00000585371 NFIAQ12857 509 aa16.11■□□□□ 0.17
CHAF1A-202ENST00000585371 FKBP1CQ5VVH2 108 aa16.11■□□□□ 0.17
CHAF1A-202ENST00000585371 RGMBQ6NW40 437 aa16.11■□□□□ 0.17
CHAF1A-202ENST00000585371 SULF1Q8IWU6 871 aa16.11■□□□□ 0.17
CHAF1A-202ENST00000585371 MIGA1Q8NAN2 632 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms