RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 RNF113AO15541 343 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-209ENST00000585335 ANGEL2Q5VTE6 544 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-209ENST00000585335 APOBEC3HQ6NTF7 200 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-209ENST00000585335 PRMT6Q96LA8 375 aaPredicted RBP17.6■□□□□ 0.41
SCAMP4-209ENST00000585335 TDRD3Q9H7E2 651 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-209ENST00000585335 VEZTQ9HBM0 779 aa17.6■□□□□ 0.41
SCAMP4-209ENST00000585335 USP40Q9NVE5 1235 aa17.6■□□□□ 0.41
SCAMP4-209ENST00000585335 MYO5AQ9Y4I1 1855 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-209ENST00000585335 MYH7P12883 1935 aa17.6■□□□□ 0.41
SCAMP4-209ENST00000585335 ADAMTSL1Q8N6G6 1762 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 CLRN2A0PK11 232 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 TOMM70O94826 608 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 TNNI2P48788 182 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 SPDYE2Q495Y8 402 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 CHADLQ6NUI6 762 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 SULF1Q8IWU6 871 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 SMC1BQ8NDV3 1235 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 ZNF384Q8TF68 577 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 ZNF70Q9UC06 446 aaPredicted RBP17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 PGAP2Q9UHJ9 254 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 PCDHAC2Q9Y5I4 1007 aa17.59■□□□□ 0.41
SCAMP4-209ENST00000585335 ECM29Q5VYK3 1845 aa17.58■□□□□ 0.41
SCAMP4-209ENST00000585335 MAGEB6P1A0A0J9YX57 407 aa17.58■□□□□ 0.4
SCAMP4-209ENST00000585335 TCRBV5S4A2TA0A5A2 114 aa17.58■□□□□ 0.4
SCAMP4-209ENST00000585335 GSPT1P15170 499 aaKnown RBP17.58■□□□□ 0.4
SCAMP4-209ENST00000585335 PPP4CP60510 307 aa17.58■□□□□ 0.4
SCAMP4-209ENST00000585335 CDC42EP5Q6NZY7 148 aa17.58■□□□□ 0.4
SCAMP4-209ENST00000585335 MIGA1Q8NAN2 632 aa17.58■□□□□ 0.4
SCAMP4-209ENST00000585335 RBM46Q8TBY0 533 aaKnown RBP17.58■□□□□ 0.4
SCAMP4-209ENST00000585335 APPBP2Q92624 585 aa17.58■□□□□ 0.4
SCAMP4-209ENST00000585335 DIAPH3Q9NSV4 1193 aa17.58■□□□□ 0.4
SCAMP4-209ENST00000585335 AATFQ9NY61 560 aaKnown RBP eCLIP17.58■□□□□ 0.4
SCAMP4-209ENST00000585335 AK9Q5TCS8 1911 aa17.57■□□□□ 0.4
SCAMP4-209ENST00000585335 SDSP20132 328 aa17.57■□□□□ 0.4
SCAMP4-209ENST00000585335 BMP2KLQ5H9B9 411 aa17.57■□□□□ 0.4
SCAMP4-209ENST00000585335 FKBP1CQ5VVH2 108 aa17.57■□□□□ 0.4
SCAMP4-209ENST00000585335 CDC37L1Q7L3B6 337 aa17.57■□□□□ 0.4
SCAMP4-209ENST00000585335 KRT26Q7Z3Y9 468 aa17.57■□□□□ 0.4
SCAMP4-209ENST00000585335 TEX11Q8IYF3 940 aa17.57■□□□□ 0.4
SCAMP4-209ENST00000585335 AIDAQ96BJ3 306 aa17.57■□□□□ 0.4
SCAMP4-209ENST00000585335 ASTN2O75129 1339 aaPredicted RBP17.56■□□□□ 0.4
SCAMP4-209ENST00000585335 POTEIP0CG38 1075 aa17.56■□□□□ 0.4
SCAMP4-209ENST00000585335 POTEJP0CG39 1038 aa17.56■□□□□ 0.4
SCAMP4-209ENST00000585335 ADGRA1Q86SQ6 560 aa17.56■□□□□ 0.4
SCAMP4-209ENST00000585335 SKAP1Q86WV1 359 aa17.56■□□□□ 0.4
SCAMP4-209ENST00000585335 CRNKL1Q9BZJ0 848 aaKnown RBP17.56■□□□□ 0.4
SCAMP4-209ENST00000585335 PPP2R3BQ9Y5P8 575 aa17.56■□□□□ 0.4
SCAMP4-209ENST00000585335 FSTL1Q12841 308 aa17.55■□□□□ 0.4
SCAMP4-209ENST00000585335 MAP1SQ66K74 1059 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-209ENST00000585335 TCP10L2B9ZVM9 353 aa17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 MBD4O95243 580 aa17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 USP5P45974 858 aa17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 RHBDL3P58872 404 aa17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 DYNLL1P63167 89 aaKnown RBP17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 ZMYM1Q5SVZ6 1142 aa17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 FAM83AQ86UY5 434 aa17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 SH3RF3Q8TEJ3 882 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 DDRGK1Q96HY6 314 aa17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 IDI2Q9BXS1 227 aa17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 HELLSQ9NRZ9 838 aa17.54■□□□□ 0.4
SCAMP4-209ENST00000585335 ENTPD3O75355 529 aa17.53■□□□□ 0.4
SCAMP4-209ENST00000585335 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
SCAMP4-209ENST00000585335 GNAT2P19087 354 aa17.53■□□□□ 0.4
SCAMP4-209ENST00000585335 CACNB3P54284 484 aa17.53■□□□□ 0.4
SCAMP4-209ENST00000585335 CASC1Q6TDU7 716 aa17.53■□□□□ 0.4
SCAMP4-209ENST00000585335 USP48Q86UV5 1035 aa17.53■□□□□ 0.4
SCAMP4-209ENST00000585335 RUFY2Q8WXA3 655 aa17.53■□□□□ 0.4
SCAMP4-209ENST00000585335 RIOK1Q9BRS2 568 aaKnown RBP17.53■□□□□ 0.4
SCAMP4-209ENST00000585335 DEFB129Q9H1M3 183 aa17.53■□□□□ 0.4
SCAMP4-209ENST00000585335 NF2P35240 595 aa17.52■□□□□ 0.4
SCAMP4-209ENST00000585335 PICALMQ13492 652 aa17.52■□□□□ 0.4
SCAMP4-209ENST00000585335 RASA3Q14644 834 aa17.52■□□□□ 0.4
SCAMP4-209ENST00000585335 HOOK2Q96ED9 719 aa17.52■□□□□ 0.4
SCAMP4-209ENST00000585335 GLIS2Q9BZE0 524 aaPredicted RBP17.52■□□□□ 0.4
SCAMP4-209ENST00000585335 PUS7LQ9H0K6 701 aaKnown RBP17.52■□□□□ 0.4
SCAMP4-209ENST00000585335 ARMT1Q9H993 441 aa17.52■□□□□ 0.4
SCAMP4-209ENST00000585335 ADM5C9JUS6 153 aa17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 GPAA1O43292 621 aa17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 WDHD1O75717 1129 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 TCP10Q12799 353 aa17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 NMIQ13287 307 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 SLFNL1Q499Z3 407 aa17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 MCMDC2Q4G0Z9 681 aa17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 LCORLQ8N3X6 602 aa17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 TGFBRAP1Q8WUH2 860 aa17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 FAM151AQ8WW52 585 aa17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 OSBP2Q969R2 916 aa17.51■□□□□ 0.39
SCAMP4-209ENST00000585335 M0R2C6 588 aa17.5■□□□□ 0.39
SCAMP4-209ENST00000585335 CHGBP05060 677 aa17.5■□□□□ 0.39
SCAMP4-209ENST00000585335 NFIAQ12857 509 aa17.5■□□□□ 0.39
SCAMP4-209ENST00000585335 SUPT20HL1Q3ZLR7 823 aa17.5■□□□□ 0.39
SCAMP4-209ENST00000585335 CWC27Q6UX04 472 aaKnown RBP17.5■□□□□ 0.39
SCAMP4-209ENST00000585335 ZSCAN29Q8IWY8 852 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-209ENST00000585335 AMOTL1Q8IY63 956 aa17.5■□□□□ 0.39
SCAMP4-209ENST00000585335 SLC4A4Q9Y6R1 1079 aa17.5■□□□□ 0.39
SCAMP4-209ENST00000585335 RPAP1Q9BWH6 1393 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-209ENST00000585335 RAD50Q92878 1312 aa17.49■□□□□ 0.39
SCAMP4-209ENST00000585335 CDC45O75419 566 aa17.49■□□□□ 0.39
SCAMP4-209ENST00000585335 MAPKAPK5Q8IW41 473 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms