RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 BTBD19C9JJ37 291 aa14.12□□□□□ -0.15
CCDC47-206ENST00000584112 ADCY3O60266 1144 aa14.12□□□□□ -0.15
CCDC47-206ENST00000584112 ATP2B4P23634 1241 aa14.12□□□□□ -0.15
CCDC47-206ENST00000584112 GTF2A2P52657 109 aa14.12□□□□□ -0.15
CCDC47-206ENST00000584112 TMEM31Q5JXX7 168 aa14.12□□□□□ -0.15
CCDC47-206ENST00000584112 NBPF3Q9H094 633 aa14.12□□□□□ -0.15
CCDC47-206ENST00000584112 GREM2Q9H772 168 aa14.12□□□□□ -0.15
CCDC47-206ENST00000584112 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
CCDC47-206ENST00000584112 ADGRA2Q96PE1 1338 aa14.12□□□□□ -0.15
CCDC47-206ENST00000584112 UNCXA6NJT0 531 aa14.11□□□□□ -0.15
CCDC47-206ENST00000584112 IGHMBP2P38935 993 aaKnown RBP14.11□□□□□ -0.15
CCDC47-206ENST00000584112 OGFOD1Q8N543 542 aa14.11□□□□□ -0.15
CCDC47-206ENST00000584112 C11orf49Q9H6J7 331 aa14.11□□□□□ -0.15
CCDC47-206ENST00000584112 THEGQ9P2T0 379 aa14.11□□□□□ -0.15
CCDC47-206ENST00000584112 REV3LO60673 3130 aa14.1□□□□□ -0.15
CCDC47-206ENST00000584112 MED23Q9ULK4 1368 aa14.1□□□□□ -0.15
CCDC47-206ENST00000584112 FBXW7Q969H0 707 aa14.1□□□□□ -0.15
CCDC47-206ENST00000584112 ZBED3Q96IU2 234 aaPredicted RBP14.1□□□□□ -0.15
CCDC47-206ENST00000584112 MINPP1Q9UNW1 487 aa14.1□□□□□ -0.15
CCDC47-206ENST00000584112 COL1A1P02452 1464 aaPredicted RBP14.1□□□□□ -0.15
CCDC47-206ENST00000584112 ECM29Q5VYK3 1845 aa14.1□□□□□ -0.15
CCDC47-206ENST00000584112 WDHD1O75717 1129 aaPredicted RBP14.09□□□□□ -0.15
CCDC47-206ENST00000584112 ITGA6P23229 1130 aa14.09□□□□□ -0.15
CCDC47-206ENST00000584112 CASP7P55210 303 aa14.09□□□□□ -0.15
CCDC47-206ENST00000584112 MRPS5P82675 430 aaKnown RBP14.09□□□□□ -0.15
CCDC47-206ENST00000584112 GRIN2CQ14957 1233 aa14.09□□□□□ -0.15
CCDC47-206ENST00000584112 DACT2Q5SW24 774 aa14.09□□□□□ -0.15
CCDC47-206ENST00000584112 MPHOSPH8Q99549 860 aa14.09□□□□□ -0.15
CCDC47-206ENST00000584112 C11orf16Q9NQ32 467 aa14.09□□□□□ -0.15
CCDC47-206ENST00000584112 PFASO15067 1338 aa14.09□□□□□ -0.15
CCDC47-206ENST00000584112 ZNF521Q96K83 1311 aa14.09□□□□□ -0.15
CCDC47-206ENST00000584112 XIRP2A4UGR9 3374 aa14.08□□□□□ -0.15
CCDC47-206ENST00000584112 CACNA1BQ00975 2339 aa14.08□□□□□ -0.16
CCDC47-206ENST00000584112 F6X3S4 739 aa14.08□□□□□ -0.16
CCDC47-206ENST00000584112 CSF1RP07333 972 aa14.08□□□□□ -0.16
CCDC47-206ENST00000584112 CCT4P50991 539 aaKnown RBP14.08□□□□□ -0.16
CCDC47-206ENST00000584112 SHHQ15465 462 aa14.08□□□□□ -0.16
CCDC47-206ENST00000584112 C9orf50Q5SZB4 431 aa14.08□□□□□ -0.16
CCDC47-206ENST00000584112 BEND3Q5T5X7 828 aa14.08□□□□□ -0.16
CCDC47-206ENST00000584112 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.08□□□□□ -0.16
CCDC47-206ENST00000584112 ANKRD2Q9GZV1 360 aa14.08□□□□□ -0.16
CCDC47-206ENST00000584112 LEMD3Q9Y2U8 911 aa14.08□□□□□ -0.16
CCDC47-206ENST00000584112 PCDHAC2Q9Y5I4 1007 aa14.08□□□□□ -0.16
CCDC47-206ENST00000584112 DOCK3Q8IZD9 2030 aa14.07□□□□□ -0.16
CCDC47-206ENST00000584112 ANKRD18BA2A2Z9 1011 aa14.07□□□□□ -0.16
CCDC47-206ENST00000584112 SUPT20HL1Q3ZLR7 823 aa14.07□□□□□ -0.16
CCDC47-206ENST00000584112 ANKLE1Q8NAG6 615 aa14.07□□□□□ -0.16
CCDC47-206ENST00000584112 IL27Q8NEV9 243 aa14.07□□□□□ -0.16
CCDC47-206ENST00000584112 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC47-206ENST00000584112 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
CCDC47-206ENST00000584112 SPTBN4Q9H254 2564 aa14.07□□□□□ -0.16
CCDC47-206ENST00000584112 E9PSI1 815 aa14.06□□□□□ -0.16
CCDC47-206ENST00000584112 ALDH1L1O75891 902 aa14.06□□□□□ -0.16
CCDC47-206ENST00000584112 CAPN2P17655 700 aa14.06□□□□□ -0.16
CCDC47-206ENST00000584112 LRRC26Q2I0M4 334 aa14.06□□□□□ -0.16
CCDC47-206ENST00000584112 POTEEQ6S8J3 1075 aa14.06□□□□□ -0.16
CCDC47-206ENST00000584112 HELBQ8NG08 1087 aaPredicted RBP14.06□□□□□ -0.16
CCDC47-206ENST00000584112 CLRN2A0PK11 232 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 GRM8O00222 908 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 FLT3LGP49771 235 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 NHLH1Q02575 133 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 IFIT5Q13325 482 aaKnown RBP14.05□□□□□ -0.16
CCDC47-206ENST00000584112 VGLL4Q14135 290 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 KIAA0825Q8IV33 1275 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 LBHD1Q9BQE6 289 aaPredicted RBP14.05□□□□□ -0.16
CCDC47-206ENST00000584112 SRCIN1Q9C0H9 1055 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 COA1Q9GZY4 146 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 C9orf78Q9NZ63 289 aaPredicted RBP14.05□□□□□ -0.16
CCDC47-206ENST00000584112 CHMP3Q9Y3E7 222 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 ZNF804BA4D1E1 1349 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 AOX1Q06278 1338 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 MYH13Q9UKX3 1938 aa14.05□□□□□ -0.16
CCDC47-206ENST00000584112 USP34Q70CQ2 3546 aa14.04□□□□□ -0.16
CCDC47-206ENST00000584112 CETPP11597 493 aa14.04□□□□□ -0.16
CCDC47-206ENST00000584112 KCNJ4P48050 445 aa14.04□□□□□ -0.16
CCDC47-206ENST00000584112 FCGRTP55899 365 aa14.04□□□□□ -0.16
CCDC47-206ENST00000584112 SMAD3P84022 425 aaKnown RBP14.04□□□□□ -0.16
CCDC47-206ENST00000584112 FOXO4P98177 505 aa14.04□□□□□ -0.16
CCDC47-206ENST00000584112 SLC4A10Q6U841 1118 aa14.04□□□□□ -0.16
CCDC47-206ENST00000584112 TAOK2Q9UL54 1235 aa14.04□□□□□ -0.16
CCDC47-206ENST00000584112 MYO3BQ8WXR4 1341 aa14.04□□□□□ -0.16
CCDC47-206ENST00000584112 CHRNDQ07001 517 aa14.03□□□□□ -0.16
CCDC47-206ENST00000584112 CCDC57Q2TAC2 916 aa14.03□□□□□ -0.16
CCDC47-206ENST00000584112 CDAN1Q8IWY9 1227 aa14.03□□□□□ -0.16
CCDC47-206ENST00000584112 KHSRPQ92945 711 aaKnown RBP eCLIP14.03□□□□□ -0.16
CCDC47-206ENST00000584112 PPP2R3BQ9Y5P8 575 aa14.03□□□□□ -0.16
CCDC47-206ENST00000584112 ARAP2Q8WZ64 1704 aa14.03□□□□□ -0.16
CCDC47-206ENST00000584112 BAHCC1Q9P281 2608 aa14.02□□□□□ -0.16
CCDC47-206ENST00000584112 PTPRCP08575 1304 aa14.02□□□□□ -0.17
CCDC47-206ENST00000584112 MMP14P50281 582 aa14.02□□□□□ -0.17
CCDC47-206ENST00000584112 CCDC85BQ15834 202 aaPredicted RBP14.02□□□□□ -0.17
CCDC47-206ENST00000584112 TAF7LQ5H9L4 462 aa14.02□□□□□ -0.17
CCDC47-206ENST00000584112 STRIP1Q5VSL9 837 aa14.02□□□□□ -0.17
CCDC47-206ENST00000584112 LMBR1LQ6UX01 489 aa14.02□□□□□ -0.17
CCDC47-206ENST00000584112 VEZTQ9HBM0 779 aa14.02□□□□□ -0.17
CCDC47-206ENST00000584112 ZCCHC17Q9NP64 241 aaKnown RBP14.02□□□□□ -0.17
CCDC47-206ENST00000584112 PKD1L2Q7Z442 2459 aa14.02□□□□□ -0.17
CCDC47-206ENST00000584112 LTBP2Q14767 1821 aa14.01□□□□□ -0.17
CCDC47-206ENST00000584112 CCER2I3L3R5 266 aa14.01□□□□□ -0.17
CCDC47-206ENST00000584112 GPR37L1O60883 481 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms