RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 LSG1Q9H089 658 aaKnown RBP11.01□□□□□ -0.65
CASC3-209ENST00000583902 DBNDD1Q9H9R9 158 aa11.01□□□□□ -0.65
CASC3-209ENST00000583902 ZNF277Q9NRM2 450 aaPredicted RBP11.01□□□□□ -0.65
CASC3-209ENST00000583902 WWC3Q9ULE0 1092 aa11.01□□□□□ -0.65
CASC3-209ENST00000583902 IQSEC3Q9UPP2 1182 aaPredicted RBP11.01□□□□□ -0.65
CASC3-209ENST00000583902 NDUFB9Q9Y6M9 179 aa11.01□□□□□ -0.65
CASC3-209ENST00000583902 SBF1O95248 1867 aa11.01□□□□□ -0.65
CASC3-209ENST00000583902 MROH7-TTC4A0A0A0MT08 1334 aa11.01□□□□□ -0.65
CASC3-209ENST00000583902 GAKO14976 1311 aa11.01□□□□□ -0.65
CASC3-209ENST00000583902 SCN9AQ15858 1988 aa11□□□□□ -0.65
CASC3-209ENST00000583902 FZD9O00144 591 aa11□□□□□ -0.65
CASC3-209ENST00000583902 HSPD1P10809 573 aaKnown RBP11□□□□□ -0.65
CASC3-209ENST00000583902 PSMA5P28066 241 aa11□□□□□ -0.65
CASC3-209ENST00000583902 PRDX5P30044 214 aa11□□□□□ -0.65
CASC3-209ENST00000583902 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
CASC3-209ENST00000583902 DOK7Q18PE1 504 aa11□□□□□ -0.65
CASC3-209ENST00000583902 CIAPIN1Q6FI81 312 aa11□□□□□ -0.65
CASC3-209ENST00000583902 RSBN1LQ6PCB5 846 aaPredicted RBP11□□□□□ -0.65
CASC3-209ENST00000583902 AMOTL1Q8IY63 956 aa11□□□□□ -0.65
CASC3-209ENST00000583902 OGFOD1Q8N543 542 aa11□□□□□ -0.65
CASC3-209ENST00000583902 DPF2Q92785 391 aa11□□□□□ -0.65
CASC3-209ENST00000583902 TEKT1Q969V4 418 aa11□□□□□ -0.65
CASC3-209ENST00000583902 STRBPQ96SI9 672 aaKnown RBP11□□□□□ -0.65
CASC3-209ENST00000583902 GABBR2O75899 941 aa10.99□□□□□ -0.65
CASC3-209ENST00000583902 HMGB1P09429 215 aaKnown RBP10.99□□□□□ -0.65
CASC3-209ENST00000583902 ANP32AP39687 249 aaKnown RBP10.99□□□□□ -0.65
CASC3-209ENST00000583902 NECTIN1Q15223 517 aa10.99□□□□□ -0.65
CASC3-209ENST00000583902 RABEP1Q15276 862 aa10.99□□□□□ -0.65
CASC3-209ENST00000583902 MTMR14Q8NCE2 650 aa10.99□□□□□ -0.65
CASC3-209ENST00000583902 ZDHHC15Q96MV8 337 aa10.99□□□□□ -0.65
CASC3-209ENST00000583902 RIOK1Q9BRS2 568 aaKnown RBP10.99□□□□□ -0.65
CASC3-209ENST00000583902 TM6SF1Q9BZW5 370 aa10.99□□□□□ -0.65
CASC3-209ENST00000583902 PUS7LQ9H0K6 701 aaKnown RBP10.99□□□□□ -0.65
CASC3-209ENST00000583902 TTF2Q9UNY4 1162 aaKnown RBP10.99□□□□□ -0.65
CASC3-209ENST00000583902 ZNF646O15015 1829 aaPredicted RBP10.99□□□□□ -0.65
CASC3-209ENST00000583902 MBD4O95243 580 aa10.98□□□□□ -0.65
CASC3-209ENST00000583902 SEC24BO95487 1268 aa10.98□□□□□ -0.65
CASC3-209ENST00000583902 SLC3A2P08195 630 aaKnown RBP10.98□□□□□ -0.65
CASC3-209ENST00000583902 MCM2P49736 904 aa10.98□□□□□ -0.65
CASC3-209ENST00000583902 IMMTQ16891 758 aaKnown RBP10.98□□□□□ -0.65
CASC3-209ENST00000583902 ARHGAP27Q6ZUM4 889 aa10.98□□□□□ -0.65
CASC3-209ENST00000583902 GPR101Q96P66 508 aaPredicted RBP10.98□□□□□ -0.65
CASC3-209ENST00000583902 TSHZ2Q9NRE2 1034 aa10.98□□□□□ -0.65
CASC3-209ENST00000583902 YDJCA8MPS7 323 aa10.97□□□□□ -0.65
CASC3-209ENST00000583902 M0R2C6 588 aa10.97□□□□□ -0.65
CASC3-209ENST00000583902 FKBP1CQ5VVH2 108 aa10.97□□□□□ -0.65
CASC3-209ENST00000583902 ZNF589Q86UQ0 364 aaPredicted RBP10.97□□□□□ -0.65
CASC3-209ENST00000583902 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
CASC3-209ENST00000583902 ZNF579Q8NAF0 562 aaKnown RBP10.97□□□□□ -0.65
CASC3-209ENST00000583902 FBXW7Q969H0 707 aa10.97□□□□□ -0.65
CASC3-209ENST00000583902 GMLQ99445 158 aa10.97□□□□□ -0.65
CASC3-209ENST00000583902 MTA3Q9BTC8 594 aa10.97□□□□□ -0.65
CASC3-209ENST00000583902 NAPBQ9H115 298 aa10.97□□□□□ -0.65
CASC3-209ENST00000583902 RNF41Q9H4P4 317 aaPredicted RBP10.97□□□□□ -0.65
CASC3-209ENST00000583902 ZNF287Q9HBT7 754 aa10.97□□□□□ -0.65
CASC3-209ENST00000583902 ARPP21Q9UBL0 812 aaPredicted RBP10.97□□□□□ -0.65
CASC3-209ENST00000583902 RBM8AQ9Y5S9 174 aaKnown RBP10.97□□□□□ -0.65
CASC3-209ENST00000583902 FOCADQ5VW36 1801 aa10.97□□□□□ -0.65
CASC3-209ENST00000583902 LAMA4Q16363 1823 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 PSMD14O00487 310 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 MYO1BO43795 1136 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 APPP05067 770 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 USP17L8P0C7I0 530 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 CXCL9Q07325 125 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 SBK1Q52WX2 424 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 IFNL3Q8IZI9 196 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 GPC2Q8N158 579 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 CHMP4CQ96CF2 233 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 CNNM2Q9H8M5 875 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 SLC4A4Q9Y6R1 1079 aa10.96□□□□□ -0.65
CASC3-209ENST00000583902 ECM29Q5VYK3 1845 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 WDR19Q8NEZ3 1342 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 GSG1L2A8MUP6 293 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 ZNF213O14771 459 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 ST18O60284 1047 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 FGAP02671 866 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 CRKP46108 304 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 PTH1RQ03431 593 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 TRDNQ13061 729 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 BECN1Q14457 450 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 GPR162Q16538 588 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 CREB3L3Q68CJ9 461 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 DPY19L2Q6NUT2 758 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 SLC51AQ86UW1 340 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 CERS5Q8N5B7 392 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 ZNF384Q8TF68 577 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 SEC62Q99442 399 aaKnown RBP10.95□□□□□ -0.66
CASC3-209ENST00000583902 IDI2Q9BXS1 227 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 ALDH8A1Q9H2A2 487 aaPredicted RBP10.95□□□□□ -0.66
CASC3-209ENST00000583902 DHX36Q9H2U1 1008 aaKnown RBP10.95□□□□□ -0.66
CASC3-209ENST00000583902 AATFQ9NY61 560 aaKnown RBP eCLIP10.95□□□□□ -0.66
CASC3-209ENST00000583902 TMOD2Q9NZR1 351 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 ANAPC4Q9UJX5 808 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 RBM19Q9Y4C8 960 aaKnown RBP10.95□□□□□ -0.66
CASC3-209ENST00000583902 DAGLAQ9Y4D2 1042 aa10.95□□□□□ -0.66
CASC3-209ENST00000583902 COL2A1P02458 1487 aaPredicted RBP10.94□□□□□ -0.66
CASC3-209ENST00000583902 CDK5RAP2Q96SN8 1893 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 SLC27A2O14975 620 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 BTDP43251 543 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 USP5P45974 858 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms