RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
ITGB4-209ENST00000583327 LCORLQ8N3X6 602 aa16.41■□□□□ 0.22
ITGB4-209ENST00000583327 OGFOD1Q8N543 542 aa16.41■□□□□ 0.22
ITGB4-209ENST00000583327 MIGA1Q8NAN2 632 aa16.41■□□□□ 0.22
ITGB4-209ENST00000583327 MAP4K1Q92918 833 aa16.41■□□□□ 0.22
ITGB4-209ENST00000583327 PRMT6Q96LA8 375 aaPredicted RBP16.41■□□□□ 0.22
ITGB4-209ENST00000583327 PCDHAC2Q9Y5I4 1007 aa16.41■□□□□ 0.22
ITGB4-209ENST00000583327 RPAP1Q9BWH6 1393 aaPredicted RBP16.4■□□□□ 0.22
ITGB4-209ENST00000583327 SHTN1A0MZ66 631 aa16.4■□□□□ 0.22
ITGB4-209ENST00000583327 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
ITGB4-209ENST00000583327 PATL2C9JE40 543 aaKnown RBP16.4■□□□□ 0.22
ITGB4-209ENST00000583327 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
ITGB4-209ENST00000583327 HSPD1P10809 573 aaKnown RBP16.4■□□□□ 0.22
ITGB4-209ENST00000583327 BTDP43251 543 aa16.4■□□□□ 0.22
ITGB4-209ENST00000583327 ALX1Q15699 326 aa16.4■□□□□ 0.22
ITGB4-209ENST00000583327 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
ITGB4-209ENST00000583327 DSCC1Q9BVC3 393 aa16.4■□□□□ 0.22
ITGB4-209ENST00000583327 USP26Q9BXU7 913 aa16.4■□□□□ 0.22
ITGB4-209ENST00000583327 ARMT1Q9H993 441 aa16.4■□□□□ 0.22
ITGB4-209ENST00000583327 AATFQ9NY61 560 aaKnown RBP eCLIP16.4■□□□□ 0.22
ITGB4-209ENST00000583327 MKRN1Q9UHC7 482 aaKnown RBP16.4■□□□□ 0.22
ITGB4-209ENST00000583327 MYH2Q9UKX2 1941 aa16.39■□□□□ 0.21
ITGB4-209ENST00000583327 GSG1L2A8MUP6 293 aa16.39■□□□□ 0.21
ITGB4-209ENST00000583327 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
ITGB4-209ENST00000583327 PLCG2P16885 1265 aa16.39■□□□□ 0.21
ITGB4-209ENST00000583327 GNAT2P19087 354 aa16.39■□□□□ 0.21
ITGB4-209ENST00000583327 PTH1RQ03431 593 aa16.39■□□□□ 0.21
ITGB4-209ENST00000583327 VPS53Q5VIR6 699 aa16.39■□□□□ 0.21
ITGB4-209ENST00000583327 CDC42EP5Q6NZY7 148 aa16.39■□□□□ 0.21
ITGB4-209ENST00000583327 MICALL2Q8IY33 904 aa16.39■□□□□ 0.21
ITGB4-209ENST00000583327 MYOZ2Q9NPC6 264 aa16.39■□□□□ 0.21
ITGB4-209ENST00000583327 POTECB2RU33 542 aa16.38■□□□□ 0.21
ITGB4-209ENST00000583327 REC8O95072 547 aa16.38■□□□□ 0.21
ITGB4-209ENST00000583327 EGFRP00533 1210 aa16.38■□□□□ 0.21
ITGB4-209ENST00000583327 DLGAP5Q15398 846 aa16.38■□□□□ 0.21
ITGB4-209ENST00000583327 GIMAP6Q6P9H5 292 aa16.38■□□□□ 0.21
ITGB4-209ENST00000583327 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
ITGB4-209ENST00000583327 ADAMTSL1Q8N6G6 1762 aa16.37■□□□□ 0.21
ITGB4-209ENST00000583327 H7C1D1 291 aa16.37■□□□□ 0.21
ITGB4-209ENST00000583327 WNT10BO00744 389 aa16.37■□□□□ 0.21
ITGB4-209ENST00000583327 PRKAB2O43741 272 aa16.37■□□□□ 0.21
ITGB4-209ENST00000583327 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
ITGB4-209ENST00000583327 EPS15P42566 896 aa16.37■□□□□ 0.21
ITGB4-209ENST00000583327 NECTIN1Q15223 517 aa16.37■□□□□ 0.21
ITGB4-209ENST00000583327 IDI2Q9BXS1 227 aa16.37■□□□□ 0.21
ITGB4-209ENST00000583327 ATP8A2Q9NTI2 1148 aa16.37■□□□□ 0.21
ITGB4-209ENST00000583327 USP40Q9NVE5 1235 aa16.37■□□□□ 0.21
ITGB4-209ENST00000583327 FGAP02671 866 aa16.36■□□□□ 0.21
ITGB4-209ENST00000583327 FKBP1CQ5VVH2 108 aa16.36■□□□□ 0.21
ITGB4-209ENST00000583327 KIAA1211Q6ZU35 1233 aa16.36■□□□□ 0.21
ITGB4-209ENST00000583327 SAMD7Q7Z3H4 446 aa16.36■□□□□ 0.21
ITGB4-209ENST00000583327 KCNB2Q92953 911 aa16.36■□□□□ 0.21
ITGB4-209ENST00000583327 NOL10Q9BSC4 688 aaKnown RBP16.36■□□□□ 0.21
ITGB4-209ENST00000583327 CRNKL1Q9BZJ0 848 aaKnown RBP16.36■□□□□ 0.21
ITGB4-209ENST00000583327 EPB41L4AQ9HCS5 686 aaPredicted RBP16.36■□□□□ 0.21
ITGB4-209ENST00000583327 SLC4A4Q9Y6R1 1079 aa16.36■□□□□ 0.21
ITGB4-209ENST00000583327 ZMYM6O95789 1325 aa16.36■□□□□ 0.21
ITGB4-209ENST00000583327 RBM5P52756 815 aaKnown RBP eCLIP16.35■□□□□ 0.21
ITGB4-209ENST00000583327 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
ITGB4-209ENST00000583327 NBPF9Q3BBW0 867 aa16.35■□□□□ 0.21
ITGB4-209ENST00000583327 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
ITGB4-209ENST00000583327 IFNL3Q8IZI9 196 aa16.35■□□□□ 0.21
ITGB4-209ENST00000583327 IL17RAQ96F46 866 aa16.35■□□□□ 0.21
ITGB4-209ENST00000583327 TDRD3Q9H7E2 651 aaKnown RBP16.35■□□□□ 0.21
ITGB4-209ENST00000583327 DCP1AQ9NPI6 582 aaPredicted RBP16.35■□□□□ 0.21
ITGB4-209ENST00000583327 ANO2Q9NQ90 1003 aa16.35■□□□□ 0.21
ITGB4-209ENST00000583327 ADARB2Q9NS39 739 aaKnown RBP16.35■□□□□ 0.21
ITGB4-209ENST00000583327 ZNF70Q9UC06 446 aaPredicted RBP16.35■□□□□ 0.21
ITGB4-209ENST00000583327 WDR90Q96KV7 1748 aa16.35■□□□□ 0.21
ITGB4-209ENST00000583327 SBK1Q52WX2 424 aa16.34■□□□□ 0.21
ITGB4-209ENST00000583327 TEX11Q8IYF3 940 aa16.34■□□□□ 0.21
ITGB4-209ENST00000583327 SDR42E1Q8WUS8 393 aa16.34■□□□□ 0.21
ITGB4-209ENST00000583327 FAM198AQ9UFP1 575 aa16.34■□□□□ 0.21
ITGB4-209ENST00000583327 PGAP2Q9UHJ9 254 aa16.34■□□□□ 0.21
ITGB4-209ENST00000583327 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
ITGB4-209ENST00000583327 ENTPD3O75355 529 aa16.33■□□□□ 0.2
ITGB4-209ENST00000583327 HSPA4P34932 840 aa16.33■□□□□ 0.2
ITGB4-209ENST00000583327 NFIAQ12857 509 aa16.33■□□□□ 0.2
ITGB4-209ENST00000583327 KIF4BQ2VIQ3 1234 aa16.33■□□□□ 0.2
ITGB4-209ENST00000583327 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
ITGB4-209ENST00000583327 TRPM4Q8TD43 1214 aa16.33■□□□□ 0.2
ITGB4-209ENST00000583327 TGFBRAP1Q8WUH2 860 aa16.33■□□□□ 0.2
ITGB4-209ENST00000583327 DDX4Q9NQI0 724 aaKnown RBP16.33■□□□□ 0.2
ITGB4-209ENST00000583327 RBM8AQ9Y5S9 174 aaKnown RBP16.33■□□□□ 0.2
ITGB4-209ENST00000583327 FLT1P17948 1338 aa16.32■□□□□ 0.2
ITGB4-209ENST00000583327 LMOD1P29536 600 aaPredicted RBP16.32■□□□□ 0.2
ITGB4-209ENST00000583327 RBM25P49756 843 aaKnown RBP16.32■□□□□ 0.2
ITGB4-209ENST00000583327 TSGA10IPQ3SY00 556 aa16.32■□□□□ 0.2
ITGB4-209ENST00000583327 CTR9Q6PD62 1173 aa16.32■□□□□ 0.2
ITGB4-209ENST00000583327 USP50Q70EL3 339 aaPredicted RBP16.32■□□□□ 0.2
ITGB4-209ENST00000583327 FAM83AQ86UY5 434 aa16.32■□□□□ 0.2
ITGB4-209ENST00000583327 CTNNA3Q9UI47 895 aa16.32■□□□□ 0.2
ITGB4-209ENST00000583327 HACL1Q9UJ83 578 aa16.32■□□□□ 0.2
ITGB4-209ENST00000583327 ANAPC4Q9UJX5 808 aa16.32■□□□□ 0.2
ITGB4-209ENST00000583327 IQCA1LA6NCM1 817 aa16.31■□□□□ 0.2
ITGB4-209ENST00000583327 RBM26Q5T8P6 1007 aaKnown RBP16.31■□□□□ 0.2
ITGB4-209ENST00000583327 NACAP1Q9BZK3 213 aa16.31■□□□□ 0.2
ITGB4-209ENST00000583327 TAF1DQ9H5J8 278 aaPredicted RBP16.31■□□□□ 0.2
ITGB4-209ENST00000583327 SCN4AP35499 1836 aa16.31■□□□□ 0.2
ITGB4-209ENST00000583327 FOCADQ5VW36 1801 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms