RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 GDPD2Q9HCC8 539 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 PDE8BO95263 885 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 SKILP12757 684 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 PTH1RQ03431 593 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 FBXL16Q8N461 479 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 SPATA5Q8NB90 893 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 MYRIPQ8NFW9 859 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 RPGRQ92834 1020 aaKnown RBP6.68□□□□□ -1.34
RTTN-209ENST00000583043 BPIFA3Q9BQP9 254 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 TSPYL1Q9H0U9 437 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 C6orf50Q9HD87 102 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 TPCN1Q9ULQ1 816 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 NIP7Q9Y221 180 aaKnown RBP eCLIP6.68□□□□□ -1.34
RTTN-209ENST00000583043 POLR3DP05423 398 aaPredicted RBP6.68□□□□□ -1.34
RTTN-209ENST00000583043 HLA-DOAP06340 250 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 EPS15P42566 896 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 ORC2Q13416 577 aaPredicted RBP6.68□□□□□ -1.34
RTTN-209ENST00000583043 FBXO18Q8NFZ0 1043 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 KCNQ3O43525 872 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 FOSBP53539 338 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 MICU3Q86XE3 530 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 TMOD2Q9NZR1 351 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 CTDP1Q9Y5B0 961 aaPredicted RBP6.68□□□□□ -1.34
RTTN-209ENST00000583043 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.68□□□□□ -1.34
RTTN-209ENST00000583043 LAD1O00515 517 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 RANBP6O60518 1105 aaKnown RBP6.68□□□□□ -1.34
RTTN-209ENST00000583043 UBASH3AP57075 661 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 MAP3K9P80192 1104 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 CKAP4Q07065 602 aaKnown RBP6.68□□□□□ -1.34
RTTN-209ENST00000583043 CCDC186Q7Z3E2 898 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 NBPF5PQ86XG9 351 aaPredicted RBP6.68□□□□□ -1.34
RTTN-209ENST00000583043 GPT2Q8TD30 523 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 RUFY1Q96T51 708 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 FOXP1Q9H334 677 aaPredicted RBP6.68□□□□□ -1.34
RTTN-209ENST00000583043 PSMA7O14818 248 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 GPTP24298 496 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 RDXP35241 583 aaKnown RBP6.67□□□□□ -1.34
RTTN-209ENST00000583043 UBA7P41226 1012 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 CEP112Q8N8E3 955 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 ERO1AQ96HE7 468 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 CUEDC2Q9H467 287 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 PSDA5PKW4 1024 aaPredicted RBP6.67□□□□□ -1.34
RTTN-209ENST00000583043 TSPY2A6NKD2 308 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 MINDY4BA8MYZ0 360 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 SLU7O95391 586 aaKnown RBP6.67□□□□□ -1.34
RTTN-209ENST00000583043 IGKV5-2P06315 115 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 CASQ1P31415 396 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 VPS36Q86VN1 386 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 RASEFQ8IZ41 740 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 SMARCC2Q8TAQ2 1214 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.67□□□□□ -1.34
RTTN-209ENST00000583043 KRT83P78385 493 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 SPA17Q15506 151 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 TTC6Q86TZ1 520 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 ERMNQ8TAM6 284 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 RNF26Q9BY78 433 aaPredicted RBP6.67□□□□□ -1.34
RTTN-209ENST00000583043 SLIT3O75094 1523 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 ERCC5P28715 1186 aaPredicted RBP6.67□□□□□ -1.34
RTTN-209ENST00000583043 KCNJ6P48051 423 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 NUP58Q9BVL2 599 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 DNAJC25Q9H1X3 360 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 PNMA2Q9UL42 364 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 AKAP12Q02952 1782 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 ARHGAP6O43182 974 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 CCDC172P0C7W6 258 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 PDIA3P30101 505 aaKnown RBP6.67□□□□□ -1.34
RTTN-209ENST00000583043 SLC39A14Q15043 492 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 IFI16Q16666 785 aaKnown RBP6.67□□□□□ -1.34
RTTN-209ENST00000583043 TMC6Q7Z403 805 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 DNAJC10Q8IXB1 793 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 EYA3Q99504 573 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 ATP8A2Q9NTI2 1148 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 FER1L4A9Z1Z3 1794 aa6.67□□□□□ -1.34
RTTN-209ENST00000583043 CYLC1P35663 651 aaPredicted RBP6.66□□□□□ -1.34
RTTN-209ENST00000583043 NSUN7Q8NE18 718 aaKnown RBP6.66□□□□□ -1.34
RTTN-209ENST00000583043 KRT40Q6A162 431 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 KRT25Q7Z3Z0 450 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 FAM107BQ9H098 131 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 CBX8Q9HC52 389 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 BTG4Q9NY30 223 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 KIAA1468Q9P260 1216 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 KCNH3Q9ULD8 1083 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 RTCBQ9Y3I0 505 aaKnown RBP6.66□□□□□ -1.34
RTTN-209ENST00000583043 MAP2P11137 1827 aaKnown RBP6.66□□□□□ -1.34
RTTN-209ENST00000583043 SETD1BQ9UPS6 1966 aaKnown RBP6.66□□□□□ -1.34
RTTN-209ENST00000583043 A6NNZ2 444 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 MBD4O95243 580 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 CCDC175P0C221 793 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 PDE6AP16499 860 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 IFNAR1P17181 557 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 ADD2P35612 726 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 TIMM10P62072 90 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 PIP4K2BP78356 416 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 TNIP1Q15025 636 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 TUBB8Q3ZCM7 444 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 CDC37L1Q7L3B6 337 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 ZNF771Q7L3S4 317 aaPredicted RBP6.66□□□□□ -1.34
RTTN-209ENST00000583043 UNC5CLQ8IV45 518 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 CCDC43Q96MW1 224 aaKnown RBP6.66□□□□□ -1.34
RTTN-209ENST00000583043 TTF2Q9UNY4 1162 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms