RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 HDAC9Q9UKV0 1011 aa14.38□□□□□ -0.11
CCDC57-216ENST00000582885 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
CCDC57-216ENST00000582885 ZMYM6O95789 1325 aa14.38□□□□□ -0.11
CCDC57-216ENST00000582885 SCN4AP35499 1836 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 PATL2C9JE40 543 aaKnown RBP14.37□□□□□ -0.11
CCDC57-216ENST00000582885 CRKP46108 304 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 GIMAP6Q6P9H5 292 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 GPC2Q8N158 579 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 LCORLQ8N3X6 602 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 MIGA1Q8NAN2 632 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 TBC1D32Q96NH3 1257 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 ARMT1Q9H993 441 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 RNF181Q9P0P0 153 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 DAGLAQ9Y4D2 1042 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 MYH8P13535 1937 aa14.37□□□□□ -0.11
CCDC57-216ENST00000582885 F8W031 263 aaPredicted RBP14.36□□□□□ -0.11
CCDC57-216ENST00000582885 FOXP2O15409 715 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 USP17L8P0C7I0 530 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 MCCP23508 829 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 HSPA4P34932 840 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 BTDP43251 543 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 NECTIN1Q15223 517 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 C9orf131Q5VYM1 1079 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 OGFOD1Q8N543 542 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 MTMR14Q8NCE2 650 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 KCNB2Q92953 911 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 IL17RAQ96F46 866 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 CRNKL1Q9BZJ0 848 aaKnown RBP14.36□□□□□ -0.11
CCDC57-216ENST00000582885 AATFQ9NY61 560 aaKnown RBP eCLIP14.36□□□□□ -0.11
CCDC57-216ENST00000582885 CTNNA3Q9UI47 895 aa14.36□□□□□ -0.11
CCDC57-216ENST00000582885 GSG1L2A8MUP6 293 aa14.35□□□□□ -0.11
CCDC57-216ENST00000582885 SCNN1DP51172 638 aa14.35□□□□□ -0.11
CCDC57-216ENST00000582885 ZNF280AP59817 542 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-216ENST00000582885 ANAPC15P60006 121 aa14.35□□□□□ -0.11
CCDC57-216ENST00000582885 DYNLL1P63167 89 aaKnown RBP14.35□□□□□ -0.11
CCDC57-216ENST00000582885 VPS53Q5VIR6 699 aa14.35□□□□□ -0.11
CCDC57-216ENST00000582885 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
CCDC57-216ENST00000582885 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
CCDC57-216ENST00000582885 ZBTB12Q9Y330 459 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-216ENST00000582885 RBM8AQ9Y5S9 174 aaKnown RBP14.35□□□□□ -0.11
CCDC57-216ENST00000582885 SLC4A4Q9Y6R1 1079 aa14.35□□□□□ -0.11
CCDC57-216ENST00000582885 ZNF541Q9H0D2 1346 aa14.35□□□□□ -0.11
CCDC57-216ENST00000582885 SRCAPQ6ZRS2 3230 aa14.35□□□□□ -0.11
CCDC57-216ENST00000582885 POLR2AP24928 1970 aaKnown RBP14.34□□□□□ -0.11
CCDC57-216ENST00000582885 RHBDL3P58872 404 aa14.34□□□□□ -0.11
CCDC57-216ENST00000582885 RNF20Q5VTR2 975 aa14.34□□□□□ -0.11
CCDC57-216ENST00000582885 APOBEC3HQ6NTF7 200 aaKnown RBP14.34□□□□□ -0.11
CCDC57-216ENST00000582885 IFNL3Q8IZI9 196 aa14.34□□□□□ -0.11
CCDC57-216ENST00000582885 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
CCDC57-216ENST00000582885 FGAP02671 866 aa14.33□□□□□ -0.12
CCDC57-216ENST00000582885 APPP05067 770 aa14.33□□□□□ -0.12
CCDC57-216ENST00000582885 GMPSP49915 693 aaPredicted RBP14.33□□□□□ -0.12
CCDC57-216ENST00000582885 TSGA10IPQ3SY00 556 aa14.33□□□□□ -0.12
CCDC57-216ENST00000582885 CFAP100Q494V2 611 aa14.33□□□□□ -0.12
CCDC57-216ENST00000582885 IL27Q8NEV9 243 aa14.33□□□□□ -0.12
CCDC57-216ENST00000582885 SH3RF3Q8TEJ3 882 aaPredicted RBP14.33□□□□□ -0.12
CCDC57-216ENST00000582885 ZBED3Q96IU2 234 aaPredicted RBP14.33□□□□□ -0.12
CCDC57-216ENST00000582885 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
CCDC57-216ENST00000582885 GJA3Q9Y6H8 435 aa14.33□□□□□ -0.12
CCDC57-216ENST00000582885 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
CCDC57-216ENST00000582885 PRKAB2O43741 272 aa14.32□□□□□ -0.12
CCDC57-216ENST00000582885 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
CCDC57-216ENST00000582885 DLGAP5Q15398 846 aa14.32□□□□□ -0.12
CCDC57-216ENST00000582885 CREB3L3Q68CJ9 461 aa14.32□□□□□ -0.12
CCDC57-216ENST00000582885 CDC42EP5Q6NZY7 148 aa14.32□□□□□ -0.12
CCDC57-216ENST00000582885 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
CCDC57-216ENST00000582885 NAPBQ9H115 298 aa14.32□□□□□ -0.12
CCDC57-216ENST00000582885 EPB41L4AQ9HCS5 686 aaPredicted RBP14.32□□□□□ -0.12
CCDC57-216ENST00000582885 MKRN1Q9UHC7 482 aaKnown RBP14.32□□□□□ -0.12
CCDC57-216ENST00000582885 WDR90Q96KV7 1748 aa14.32□□□□□ -0.12
CCDC57-216ENST00000582885 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
CCDC57-216ENST00000582885 SLC27A2O14975 620 aa14.31□□□□□ -0.12
CCDC57-216ENST00000582885 ZKSCAN1P17029 563 aaPredicted RBP14.31□□□□□ -0.12
CCDC57-216ENST00000582885 RBM5P52756 815 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCDC57-216ENST00000582885 IMMTQ16891 758 aaKnown RBP14.31□□□□□ -0.12
CCDC57-216ENST00000582885 SBK1Q52WX2 424 aa14.31□□□□□ -0.12
CCDC57-216ENST00000582885 DPY19L2Q6NUT2 758 aa14.31□□□□□ -0.12
CCDC57-216ENST00000582885 TEX11Q8IYF3 940 aa14.31□□□□□ -0.12
CCDC57-216ENST00000582885 SDR42E1Q8WUS8 393 aa14.31□□□□□ -0.12
CCDC57-216ENST00000582885 PRMT6Q96LA8 375 aaPredicted RBP14.31□□□□□ -0.12
CCDC57-216ENST00000582885 IDI2Q9BXS1 227 aa14.31□□□□□ -0.12
CCDC57-216ENST00000582885 MYOZ2Q9NPC6 264 aa14.31□□□□□ -0.12
CCDC57-216ENST00000582885 DCP1AQ9NPI6 582 aaPredicted RBP14.31□□□□□ -0.12
CCDC57-216ENST00000582885 USP40Q9NVE5 1235 aa14.31□□□□□ -0.12
CCDC57-216ENST00000582885 GPRC5DQ9NZD1 345 aa14.31□□□□□ -0.12
CCDC57-216ENST00000582885 CNOT7Q9UIV1 285 aaKnown RBP14.31□□□□□ -0.12
CCDC57-216ENST00000582885 COL2A1P02458 1487 aaPredicted RBP14.31□□□□□ -0.12
CCDC57-216ENST00000582885 SIPA1L1O43166 1804 aa14.3□□□□□ -0.12
CCDC57-216ENST00000582885 CYP21A2P08686 494 aa14.3□□□□□ -0.12
CCDC57-216ENST00000582885 USP5P45974 858 aa14.3□□□□□ -0.12
CCDC57-216ENST00000582885 TDO2P48775 406 aa14.3□□□□□ -0.12
CCDC57-216ENST00000582885 KRT32Q14532 448 aa14.3□□□□□ -0.12
CCDC57-216ENST00000582885 FKBP1CQ5VVH2 108 aa14.3□□□□□ -0.12
CCDC57-216ENST00000582885 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
CCDC57-216ENST00000582885 KIF2CQ99661 725 aa14.3□□□□□ -0.12
CCDC57-216ENST00000582885 ARPP21Q9UBL0 812 aaPredicted RBP14.3□□□□□ -0.12
CCDC57-216ENST00000582885 ANAPC4Q9UJX5 808 aa14.3□□□□□ -0.12
CCDC57-216ENST00000582885 SNX14Q9Y5W7 946 aa14.3□□□□□ -0.12
CCDC57-216ENST00000582885 H7C1D1 291 aa14.29□□□□□ -0.12
CCDC57-216ENST00000582885 ZNF213O14771 459 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms