RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 WTIPA6NIX2 430 aaPredicted RBP15.93■□□□□ 0.14
SRSF1-205ENST00000582730 ILDR1Q86SU0 546 aaPredicted RBP15.93■□□□□ 0.14
SRSF1-205ENST00000582730 RAI14Q9P0K7 980 aa15.93■□□□□ 0.14
SRSF1-205ENST00000582730 SH2B2O14492 632 aaPredicted RBP15.93■□□□□ 0.14
SRSF1-205ENST00000582730 STK38Q15208 465 aa15.93■□□□□ 0.14
SRSF1-205ENST00000582730 ZNF710Q8N1W2 664 aa15.93■□□□□ 0.14
SRSF1-205ENST00000582730 FSIP1Q8NA03 581 aa15.93■□□□□ 0.14
SRSF1-205ENST00000582730 PHKBQ93100 1093 aa15.93■□□□□ 0.14
SRSF1-205ENST00000582730 AIFM3Q96NN9 605 aa15.93■□□□□ 0.14
SRSF1-205ENST00000582730 RCOR1Q9UKL0 485 aa15.93■□□□□ 0.14
SRSF1-205ENST00000582730 GNL2Q13823 731 aaKnown RBP15.92■□□□□ 0.14
SRSF1-205ENST00000582730 PIBF1Q8WXW3 757 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 ZKSCAN3Q9BRR0 538 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 IFIT3O14879 490 aaKnown RBP15.92■□□□□ 0.14
SRSF1-205ENST00000582730 NPHP1O15259 732 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 KINO60870 393 aaKnown RBP15.92■□□□□ 0.14
SRSF1-205ENST00000582730 CYP7A1P22680 504 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 NOLC1Q14978 699 aaKnown RBP eCLIP15.92■□□□□ 0.144e-11■□□□□ 10.2
SRSF1-205ENST00000582730 CPLX2Q6PUV4 134 aaKnown RBP15.92■□□□□ 0.14
SRSF1-205ENST00000582730 FBXW7Q969H0 707 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 NACAP1Q9BZK3 213 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 DNAJC25Q9H1X3 360 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 GOLPH3LQ9H4A5 285 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 TTC12Q9H892 705 aaPredicted RBP15.92■□□□□ 0.14
SRSF1-205ENST00000582730 ZBTB43O43298 467 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 APOA5Q6Q788 366 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 C17orf53Q8N3J3 647 aaPredicted RBP15.92■□□□□ 0.14
SRSF1-205ENST00000582730 FBXO18Q8NFZ0 1043 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 PRIMPOLQ96LW4 560 aa15.92■□□□□ 0.14
SRSF1-205ENST00000582730 LRP5O75197 1615 aa15.91■□□□□ 0.14
SRSF1-205ENST00000582730 GOLGA8AA7E2F4 631 aa15.91■□□□□ 0.14
SRSF1-205ENST00000582730 AP5Z1O43299 807 aa15.91■□□□□ 0.14
SRSF1-205ENST00000582730 MFSD6Q6ZSS7 791 aa15.91■□□□□ 0.14
SRSF1-205ENST00000582730 ALG1Q9BT22 464 aa15.91■□□□□ 0.14
SRSF1-205ENST00000582730 ZMYM6O95789 1325 aa15.91■□□□□ 0.14
SRSF1-205ENST00000582730 ZSCAN20P17040 1043 aaPredicted RBP15.91■□□□□ 0.14
SRSF1-205ENST00000582730 SYNE3Q6ZMZ3 975 aa15.91■□□□□ 0.14
SRSF1-205ENST00000582730 CBX8Q9HC52 389 aa15.91■□□□□ 0.14
SRSF1-205ENST00000582730 SRP68Q9UHB9 627 aaKnown RBP15.91■□□□□ 0.14
SRSF1-205ENST00000582730 CLIC4Q9Y696 253 aa15.91■□□□□ 0.14
SRSF1-205ENST00000582730 WDR19Q8NEZ3 1342 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 CCDC69A6NI79 296 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 GSG1L2A8MUP6 293 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 MINDY4BA8MYZ0 360 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 UBAP1LF5GYI3 381 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 DMTNQ08495 405 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 ZSWIM5Q9P217 1185 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 CDC27P30260 824 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 SDR42E1Q8WUS8 393 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 ERCC4Q92889 916 aaPredicted RBP15.9■□□□□ 0.14
SRSF1-205ENST00000582730 TMEM87BQ96K49 555 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 GNL3LQ9NVN8 582 aaKnown RBP15.9■□□□□ 0.14
SRSF1-205ENST00000582730 SLC12A7Q9Y666 1083 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 LTBP4Q8N2S1 1624 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 GNPATO15228 680 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 CDKL5O76039 1030 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 ZNF165P49910 485 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 AKNAD1Q5T1N1 836 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 CLEC4GQ6UXB4 293 aa15.9■□□□□ 0.14
SRSF1-205ENST00000582730 AEBP2Q6ZN18 517 aaPredicted RBP15.9■□□□□ 0.14
SRSF1-205ENST00000582730 A0A087WWV3 80 aa15.89■□□□□ 0.13
SRSF1-205ENST00000582730 KIF28PB7ZC32 967 aa15.89■□□□□ 0.13
SRSF1-205ENST00000582730 ATL3Q6DD88 541 aa15.89■□□□□ 0.13
SRSF1-205ENST00000582730 CCDC82Q8N4S0 544 aa15.89■□□□□ 0.13
SRSF1-205ENST00000582730 CELF1Q92879 486 aaKnown RBP15.89■□□□□ 0.13
SRSF1-205ENST00000582730 PCDHA7Q9UN72 937 aa15.89■□□□□ 0.13
SRSF1-205ENST00000582730 A0A1B0GVL5 298 aa15.89■□□□□ 0.13
SRSF1-205ENST00000582730 CAVIN4Q5BKX8 364 aa15.89■□□□□ 0.13
SRSF1-205ENST00000582730 LY9Q9HBG7 655 aa15.89■□□□□ 0.13
SRSF1-205ENST00000582730 GTF2F1P35269 517 aaKnown RBP eCLIP15.88■□□□□ 0.132e-7■■■□□ 15.1
SRSF1-205ENST00000582730 IARSP41252 1262 aaKnown RBP15.88■□□□□ 0.13
SRSF1-205ENST00000582730 UTP14CQ5TAP6 766 aaKnown RBP15.88■□□□□ 0.13
SRSF1-205ENST00000582730 MYSM1Q5VVJ2 828 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
SRSF1-205ENST00000582730 DDX60Q8IY21 1712 aaKnown RBP15.88■□□□□ 0.13
SRSF1-205ENST00000582730 DRC7Q8IY82 874 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 IGDCC4Q8TDY8 1250 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 CBX1P83916 185 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 ALX1Q15699 326 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 SDF4Q9BRK5 362 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 SLC26A6Q9BXS9 759 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 RTL9Q8NET4 1388 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 ZPR1O75312 459 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 GNAT2P19087 354 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 FAM160A1Q05DH4 1040 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 TRIM29Q14134 588 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 ADGRA1Q86SQ6 560 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 MRPS27Q92552 414 aaKnown RBP15.88■□□□□ 0.13
SRSF1-205ENST00000582730 SETDB2Q96T68 719 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 KRT23Q9C075 422 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 CNNM2Q9H8M5 875 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 RTEL1Q9NZ71 1219 aa15.88■□□□□ 0.13
SRSF1-205ENST00000582730 ERICH2A1L162 156 aa15.87■□□□□ 0.13
SRSF1-205ENST00000582730 KIF23Q02241 960 aaPredicted RBP15.87■□□□□ 0.13
SRSF1-205ENST00000582730 TRIM5Q9C035 493 aa15.87■□□□□ 0.13
SRSF1-205ENST00000582730 TACC3Q9Y6A5 838 aa15.87■□□□□ 0.13
SRSF1-205ENST00000582730 COL4A1P02462 1669 aa15.87■□□□□ 0.13
SRSF1-205ENST00000582730 MAGEB6P1A0A0J9YX57 407 aa15.87■□□□□ 0.13
SRSF1-205ENST00000582730 UBE2Q2LH0YL09 131 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms