RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 TTC41PQ6P2S7 1318 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 UNCXA6NJT0 531 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 ADM5C9JUS6 153 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 TRAF5O00463 557 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 CYP2E1P05181 493 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-212ENST00000582122 ZAP70P43403 619 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 MECOMQ03112 1051 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 GRIK5Q16478 980 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-212ENST00000582122 SMC5Q8IY18 1101 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 NSUN4Q96CB9 384 aaKnown RBP12.67□□□□□ -0.38
TOP3A-212ENST00000582122 CDCA5Q96FF9 252 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.67□□□□□ -0.38
TOP3A-212ENST00000582122 TDRD3Q9H7E2 651 aaKnown RBP12.67□□□□□ -0.38
TOP3A-212ENST00000582122 GBA2Q9HCG7 927 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-212ENST00000582122 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 POLR2AP24928 1970 aaKnown RBP12.67□□□□□ -0.38
TOP3A-212ENST00000582122 ASTN2O75129 1339 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-212ENST00000582122 GPR75-ASB3A0A0A6YYF3 556 aa12.66□□□□□ -0.38
TOP3A-212ENST00000582122 CLRN2A0PK11 232 aa12.66□□□□□ -0.38
TOP3A-212ENST00000582122 PPP1R12BO60237 982 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-212ENST00000582122 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
TOP3A-212ENST00000582122 MLLT1Q03111 559 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-212ENST00000582122 ANKRD45Q5TZF3 282 aa12.66□□□□□ -0.38
TOP3A-212ENST00000582122 CST9Q5W186 159 aa12.66□□□□□ -0.38
TOP3A-212ENST00000582122 ZSCAN25Q6NSZ9 544 aa12.66□□□□□ -0.38
TOP3A-212ENST00000582122 ARMC9Q7Z3E5 817 aa12.66□□□□□ -0.38
TOP3A-212ENST00000582122 CAPNS2Q96L46 248 aa12.66□□□□□ -0.38
TOP3A-212ENST00000582122 HAUS7Q99871 368 aa12.66□□□□□ -0.38
TOP3A-212ENST00000582122 ZNF408Q9H9D4 720 aa12.66□□□□□ -0.38
TOP3A-212ENST00000582122 TLL2Q9Y6L7 1015 aa12.66□□□□□ -0.38
TOP3A-212ENST00000582122 AKAP11Q9UKA4 1901 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 CA12O43570 354 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 IDH1O75874 414 aaKnown RBP12.65□□□□□ -0.38
TOP3A-212ENST00000582122 GLRX3O76003 335 aaKnown RBP12.65□□□□□ -0.38
TOP3A-212ENST00000582122 NEFLP07196 543 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 RASA3Q14644 834 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 DIXDC1Q155Q3 683 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 PI16Q6UXB8 463 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 TBC1D9Q6ZT07 1266 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 TICAM2Q86XR7 235 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 IDI2Q9BXS1 227 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 USP40Q9NVE5 1235 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 PAG1Q9NWQ8 432 aa12.65□□□□□ -0.38
TOP3A-212ENST00000582122 RPAP1Q9BWH6 1393 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-212ENST00000582122 CCDC85CA6NKD9 419 aa12.64□□□□□ -0.39
TOP3A-212ENST00000582122 SMARCA5O60264 1052 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-212ENST00000582122 ENTPD3O75355 529 aa12.64□□□□□ -0.39
TOP3A-212ENST00000582122 PPP4CP60510 307 aa12.64□□□□□ -0.39
TOP3A-212ENST00000582122 CDC42EP5Q6NZY7 148 aa12.64□□□□□ -0.39
TOP3A-212ENST00000582122 SAPCD2Q86UD0 394 aa12.64□□□□□ -0.39
TOP3A-212ENST00000582122 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
TOP3A-212ENST00000582122 DNAJC2Q99543 621 aaKnown RBP12.64□□□□□ -0.39
TOP3A-212ENST00000582122 BCL11AQ9H165 835 aa12.64□□□□□ -0.39
TOP3A-212ENST00000582122 MYH2Q9UKX2 1941 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 TCP10L2B9ZVM9 353 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 MX1P20591 662 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 MAP2K2P36507 400 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 BTDP43251 543 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 IREB2P48200 963 aaKnown RBP12.63□□□□□ -0.39
TOP3A-212ENST00000582122 RGS19P49795 217 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 HUNKP57058 714 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 GRM1Q13255 1194 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 TTLL12Q14166 644 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-212ENST00000582122 DCAF15Q66K64 600 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 BOLA2Q9H3K6 86 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 PIH1D3Q9NQM4 214 aaKnown RBP12.63□□□□□ -0.39
TOP3A-212ENST00000582122 PCDHAC2Q9Y5I4 1007 aa12.63□□□□□ -0.39
TOP3A-212ENST00000582122 PAPPA2Q9BXP8 1791 aa12.62□□□□□ -0.39
TOP3A-212ENST00000582122 GOLIM4O00461 696 aa12.62□□□□□ -0.39
TOP3A-212ENST00000582122 ZFYP08048 801 aaPredicted RBP12.62□□□□□ -0.39
TOP3A-212ENST00000582122 CYP7A1P22680 504 aa12.62□□□□□ -0.39
TOP3A-212ENST00000582122 NUCB1Q02818 461 aa12.62□□□□□ -0.39
TOP3A-212ENST00000582122 MAP3K11Q16584 847 aa12.62□□□□□ -0.39
TOP3A-212ENST00000582122 CYP4F22Q6NT55 531 aa12.62□□□□□ -0.39
TOP3A-212ENST00000582122 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
TOP3A-212ENST00000582122 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
TOP3A-212ENST00000582122 STAP2Q9UGK3 403 aa12.62□□□□□ -0.39
TOP3A-212ENST00000582122 AOX1Q06278 1338 aa12.62□□□□□ -0.39
TOP3A-212ENST00000582122 SLC9C2Q5TAH2 1124 aa12.61□□□□□ -0.39
TOP3A-212ENST00000582122 RGMBQ6NW40 437 aa12.61□□□□□ -0.39
TOP3A-212ENST00000582122 REM2Q8IYK8 340 aaPredicted RBP12.61□□□□□ -0.39
TOP3A-212ENST00000582122 MAGEB6Q8N7X4 407 aa12.61□□□□□ -0.39
TOP3A-212ENST00000582122 DHX36Q9H2U1 1008 aaKnown RBP12.61□□□□□ -0.39
TOP3A-212ENST00000582122 MAST2Q6P0Q8 1798 aa12.61□□□□□ -0.39
TOP3A-212ENST00000582122 PDE4DIPQ5VU43 2346 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 IGHDP01880 384 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 PDE6AP16499 860 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 RHBDL3P58872 404 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 IRX6P78412 446 aaPredicted RBP12.6□□□□□ -0.39
TOP3A-212ENST00000582122 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.39
TOP3A-212ENST00000582122 NOGQ13253 232 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 UBE3CQ15386 1083 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 ERICH6BQ5W0A0 696 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 TEX11Q8IYF3 940 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 KBTBD3Q8NAB2 608 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 ZNF384Q8TF68 577 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 TEPSINQ96N21 525 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 TMEM39BQ9GZU3 492 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms