RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 SART1O43290 800 aaKnown RBP7.41□□□□□ -1.22
NF1-220ENST00000581113 LIG1P18858 919 aa7.41□□□□□ -1.22
NF1-220ENST00000581113 VAMP1P23763 118 aa7.41□□□□□ -1.22
NF1-220ENST00000581113 LIG3P49916 1009 aa7.41□□□□□ -1.22
NF1-220ENST00000581113 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
NF1-220ENST00000581113 ZNF252P-AS1Q0IIN9 211 aa7.41□□□□□ -1.22
NF1-220ENST00000581113 AKAP4Q5JQC9 854 aa7.41□□□□□ -1.22
NF1-220ENST00000581113 LDLRAD1Q5T700 205 aa7.41□□□□□ -1.22
NF1-220ENST00000581113 MPRIPQ6WCQ1 1025 aa7.41□□□□□ -1.22
NF1-220ENST00000581113 Q6ZS46 218 aa7.41□□□□□ -1.22
NF1-220ENST00000581113 WDR89Q96FK6 387 aaPredicted RBP7.41□□□□□ -1.22
NF1-220ENST00000581113 ACSBG1Q96GR2 724 aa7.41□□□□□ -1.22
NF1-220ENST00000581113 SPOCK3Q9BQ16 436 aa7.41□□□□□ -1.22
NF1-220ENST00000581113 AOC2O75106 756 aa7.4□□□□□ -1.22
NF1-220ENST00000581113 RLBP1P12271 317 aa7.4□□□□□ -1.22
NF1-220ENST00000581113 DRD2P14416 443 aa7.4□□□□□ -1.22
NF1-220ENST00000581113 SMG8Q8ND04 991 aaKnown RBP7.4□□□□□ -1.22
NF1-220ENST00000581113 UBL7Q96S82 380 aaPredicted RBP7.4□□□□□ -1.22
NF1-220ENST00000581113 WDR18Q9BV38 432 aa7.4□□□□□ -1.22
NF1-220ENST00000581113 SUGCTQ9HAC7 445 aa7.4□□□□□ -1.22
NF1-220ENST00000581113 KRT82Q9NSB4 513 aa7.4□□□□□ -1.22
NF1-220ENST00000581113 CYP8B1Q9UNU6 501 aa7.4□□□□□ -1.22
NF1-220ENST00000581113 TLR6Q9Y2C9 796 aa7.4□□□□□ -1.22
NF1-220ENST00000581113 ZNF862O60290 1169 aa7.39□□□□□ -1.23
NF1-220ENST00000581113 PROCP04070 461 aa7.39□□□□□ -1.23
NF1-220ENST00000581113 PREPP48147 710 aa7.39□□□□□ -1.23
NF1-220ENST00000581113 HS2ST1Q7LGA3 356 aa7.39□□□□□ -1.23
NF1-220ENST00000581113 DZIP1LQ8IYY4 767 aaKnown RBP7.39□□□□□ -1.23
NF1-220ENST00000581113 GPBAR1Q8TDU6 330 aa7.39□□□□□ -1.23
NF1-220ENST00000581113 TP53INP1Q96A56 240 aa7.39□□□□□ -1.23
NF1-220ENST00000581113 GGT7Q9UJ14 662 aa7.39□□□□□ -1.23
NF1-220ENST00000581113 AP4E1Q9UPM8 1137 aa7.39□□□□□ -1.23
NF1-220ENST00000581113 ADH5P11766 374 aa7.38□□□□□ -1.23
NF1-220ENST00000581113 ZNF76P36508 570 aa7.38□□□□□ -1.23
NF1-220ENST00000581113 RPS26P62854 115 aaKnown RBP7.38□□□□□ -1.23
NF1-220ENST00000581113 DOC2BQ14184 412 aa7.38□□□□□ -1.23
NF1-220ENST00000581113 RELL1Q8IUW5 271 aa7.38□□□□□ -1.23
NF1-220ENST00000581113 UTP4Q969X6 686 aaKnown RBP7.38□□□□□ -1.23
NF1-220ENST00000581113 GAS2O43903 313 aaKnown RBP7.37□□□□□ -1.23
NF1-220ENST00000581113 TRIM37O94972 964 aa7.37□□□□□ -1.23
NF1-220ENST00000581113 TIAF1O95411 115 aa7.37□□□□□ -1.23
NF1-220ENST00000581113 SLFN14P0C7P3 912 aa7.37□□□□□ -1.23
NF1-220ENST00000581113 GBP2P32456 591 aaPredicted RBP7.37□□□□□ -1.23
NF1-220ENST00000581113 SOX4Q06945 474 aaPredicted RBP7.37□□□□□ -1.23
NF1-220ENST00000581113 AGMOQ6ZNB7 445 aa7.37□□□□□ -1.23
NF1-220ENST00000581113 SSBP4Q9BWG4 385 aaPredicted RBP7.37□□□□□ -1.23
NF1-220ENST00000581113 TPSG1Q9NRR2 321 aa7.37□□□□□ -1.23
NF1-220ENST00000581113 PCDHB5Q9Y5E4 795 aa7.37□□□□□ -1.23
NF1-220ENST00000581113 MINDY4BA8MYZ0 360 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 SCAMP3O14828 347 aaKnown RBP7.36□□□□□ -1.23
NF1-220ENST00000581113 IGHA1P01876 353 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 TFE3P19532 575 aaPredicted RBP7.36□□□□□ -1.23
NF1-220ENST00000581113 FANCCQ00597 558 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 SEPT6Q14141 434 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 KIF4BQ2VIQ3 1234 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 DYMQ7RTS9 669 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 PHC3Q8NDX5 983 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 FAM46AQ96IP4 442 aaKnown RBP7.36□□□□□ -1.23
NF1-220ENST00000581113 MIR1-1HGQ9H1L0 117 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 COPRSQ9NQ92 184 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 KBTBD4Q9NVX7 518 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 PCDHA4Q9UN74 947 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 PWP1Q13610 501 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 UVSSAQ2YD98 709 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 ERMP1Q7Z2K6 904 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 TMEM74Q96NL1 305 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 RSRP1Q9BUV0 290 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 METTL5Q9NRN9 209 aaKnown RBP7.36□□□□□ -1.23
NF1-220ENST00000581113 PPP1R9AQ9ULJ8 1098 aa7.36□□□□□ -1.23
NF1-220ENST00000581113 TMPRSS2O15393 492 aa7.35□□□□□ -1.23
NF1-220ENST00000581113 USP11P51784 963 aa7.35□□□□□ -1.23
NF1-220ENST00000581113 ID3Q02535 119 aa7.35□□□□□ -1.23
NF1-220ENST00000581113 PTPN11Q06124 597 aaPredicted RBP7.35□□□□□ -1.23
NF1-220ENST00000581113 SCARA3Q6AZY7 606 aa7.35□□□□□ -1.23
NF1-220ENST00000581113 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.35□□□□□ -1.23
NF1-220ENST00000581113 ARMC10Q8N2F6 343 aa7.35□□□□□ -1.23
NF1-220ENST00000581113 C2CD4AQ8NCU7 369 aaPredicted RBP7.35□□□□□ -1.23
NF1-220ENST00000581113 RNF34Q969K3 372 aa7.35□□□□□ -1.23
NF1-220ENST00000581113 GAL3ST3Q96A11 431 aa7.35□□□□□ -1.23
NF1-220ENST00000581113 MYRFLQ96LU7 910 aa7.35□□□□□ -1.23
NF1-220ENST00000581113 CACNA2D2Q9NY47 1150 aa7.35□□□□□ -1.23
NF1-220ENST00000581113 PF4P02776 101 aa7.34□□□□□ -1.23
NF1-220ENST00000581113 BMP3P12645 472 aa7.34□□□□□ -1.23
NF1-220ENST00000581113 FAM160A1Q05DH4 1040 aa7.34□□□□□ -1.23
NF1-220ENST00000581113 CAMK2GQ13555 558 aaPredicted RBP7.34□□□□□ -1.23
NF1-220ENST00000581113 JARID2Q92833 1246 aaPredicted RBP7.34□□□□□ -1.23
NF1-220ENST00000581113 KCNF1Q9H3M0 494 aa7.34□□□□□ -1.23
NF1-220ENST00000581113 PCDHGC5Q9Y5F6 944 aa7.34□□□□□ -1.23
NF1-220ENST00000581113 ACTL7BQ9Y614 415 aa7.34□□□□□ -1.23
NF1-220ENST00000581113 SYNGAP1Q96PV0 1343 aa7.34□□□□□ -1.24
NF1-220ENST00000581113 DCDC2CA8MYV0 355 aa7.33□□□□□ -1.24
NF1-220ENST00000581113 E9PSI1 815 aa7.33□□□□□ -1.24
NF1-220ENST00000581113 DHX15O43143 795 aaKnown RBP7.33□□□□□ -1.24
NF1-220ENST00000581113 RXRBP28702 533 aa7.33□□□□□ -1.24
NF1-220ENST00000581113 ASPAP45381 313 aa7.33□□□□□ -1.24
NF1-220ENST00000581113 SGO2Q562F6 1265 aa7.33□□□□□ -1.24
NF1-220ENST00000581113 ZC3H12AQ5D1E8 599 aaKnown RBP7.33□□□□□ -1.24
NF1-220ENST00000581113 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.33□□□□□ -1.24
NF1-220ENST00000581113 TRIM42Q8IWZ5 723 aa7.33□□□□□ -1.24
NF1-220ENST00000581113 ELMO3Q96BJ8 720 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms