RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 DDX11Q96FC9 970 aa7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 TMEM87BQ96K49 555 aa7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 KRT23Q9C075 422 aa7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 CNNM2Q9H8M5 875 aa7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 GRPEL1Q9HAV7 217 aa7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 GDPD2Q9HCC8 539 aa7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 TFCP2L1Q9NZI6 479 aa7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 ANGEL1Q9UNK9 670 aaKnown RBP7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 LEMD3Q9Y2U8 911 aa7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 NID2Q14112 1375 aa7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 MYH15Q9Y2K3 1946 aa7.42□□□□□ -1.22
PPP4R1-217ENST00000580583 NAV1Q8NEY1 1877 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 WTIPA6NIX2 430 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 B4E1Z4 1266 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 H3BQV1 296 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 POLRMTO00411 1230 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 PRKAB2O43741 272 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 CDKL5O76039 1030 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 CTDNEP1O95476 244 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 HOXA10P31260 410 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 UBE2HP62256 183 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 CCT2P78371 535 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 DNM1Q05193 864 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 CHAF1AQ13111 956 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 RESTQ13127 1097 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 ZNF827Q17R98 1081 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 AKNAD1Q5T1N1 836 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 IFFO2Q5TF58 517 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 SPTY2D1Q68D10 685 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 C15orf52Q6ZUT6 534 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 ZNF804AQ7Z570 1209 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 USP48Q86UV5 1035 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 FERMT3Q86UX7 667 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 RBM17Q96I25 401 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 RIOK1Q9BRS2 568 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 BRIP1Q9BX63 1249 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 RNF41Q9H4P4 317 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 NCOA5Q9HCD5 579 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 GPHNQ9NQX3 736 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 TMEM63CQ9P1W3 806 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 ANKIB1Q9P2G1 1089 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 RBM27Q9P2N5 1060 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 BRPF3Q9ULD4 1205 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 ELP1O95163 1332 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 DDX60LQ5H9U9 1706 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 CCDC88AQ3V6T2 1871 aa7.41□□□□□ -1.22
PPP4R1-217ENST00000580583 CPLX1O14810 134 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 PLSCR1O15162 318 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 KDM4AO75164 1064 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 GADD45BO75293 160 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 GPSM2P81274 684 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 MECOMQ03112 1051 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 CTDSPL2Q05D32 466 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 PPARAQ07869 468 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 SART3Q15020 963 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 TMEM67Q5HYA8 995 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 APOA5Q6Q788 366 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 MFSD6Q6ZSS7 791 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 CYB5R4Q7L1T6 521 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 TMC4Q7Z404 712 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 SGMS1Q86VZ5 419 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 DZIP1Q86YF9 867 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 FLAD1Q8NFF5 587 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 AKT1S1Q96B36 256 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 NSUN4Q96CB9 384 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 CRAMP1Q96RY5 1269 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 MTA3Q9BTC8 594 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 CRNKL1Q9BZJ0 848 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 SCAND2PQ9GZW5 306 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 ZSCAN16Q9H4T2 348 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 ANAPC4Q9UJX5 808 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 NSFL1CQ9UNZ2 370 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 HPS5Q9UPZ3 1129 aa7.4□□□□□ -1.22
PPP4R1-217ENST00000580583 QSER1Q2KHR3 1735 aa7.4□□□□□ -1.23
PPP4R1-217ENST00000580583 DLEC1Q9Y238 1755 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 STK36Q9NRP7 1315 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 SYCE3A1L190 88 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 GOLGA8AA7E2F4 631 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 UFL1O94874 794 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 APBA3O96018 575 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 PCP11498 1178 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 XRCC6P12956 609 aaKnown RBP eCLIP7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 ATP2B4P23634 1241 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 PRDX5P30044 214 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 LIFRP42702 1097 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 METAP2P50579 478 aaKnown RBP eCLIP7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 FOSBP53539 338 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 RCAN1P53805 252 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 CCDC183Q5T5S1 534 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 GIMAP6Q6P9H5 292 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 CPLX2Q6PUV4 134 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 NFXL1Q6ZNB6 911 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 SLC51AQ86UW1 340 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 MICU3Q86XE3 530 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 GAS2L3Q86XJ1 694 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 PROM2Q8N271 834 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 WDR66Q8TBY9 1149 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 ZNF384Q8TF68 577 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 SDR42E1Q8WUS8 393 aa7.39□□□□□ -1.23
PPP4R1-217ENST00000580583 LY9Q9HBG7 655 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms