RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ARAP2Q8WZ64 1704 aa18.18■□□□□ 0.5
CSNK1D-213ENST00000580446 CHL1O00533 1208 aa18.18■□□□□ 0.5
CSNK1D-213ENST00000580446 CRKP46108 304 aa18.18■□□□□ 0.5
CSNK1D-213ENST00000580446 MFSD14BQ5SR56 506 aa18.18■□□□□ 0.5
CSNK1D-213ENST00000580446 ZNF804AQ7Z570 1209 aa18.18■□□□□ 0.5
CSNK1D-213ENST00000580446 ANKLE1Q8NAG6 615 aa18.18■□□□□ 0.5
CSNK1D-213ENST00000580446 IRF5Q13568 498 aa18.17■□□□□ 0.5
CSNK1D-213ENST00000580446 METTL22Q9BUU2 404 aaPredicted RBP18.17■□□□□ 0.5
CSNK1D-213ENST00000580446 SERPINA10Q9UK55 444 aa18.17■□□□□ 0.5
CSNK1D-213ENST00000580446 KCNH4Q9UQ05 1017 aa18.17■□□□□ 0.5
CSNK1D-213ENST00000580446 IGKV5-2P06315 115 aa18.16■□□□□ 0.5
CSNK1D-213ENST00000580446 FKBP1AP62942 108 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-213ENST00000580446 CWF19L2Q2TBE0 894 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-213ENST00000580446 UBE3BQ7Z3V4 1068 aa18.15■□□□□ 0.5
CSNK1D-213ENST00000580446 MAP3K2Q9Y2U5 619 aa18.15■□□□□ 0.5
CSNK1D-213ENST00000580446 CDH23Q9H251 3354 aa18.15■□□□□ 0.5
CSNK1D-213ENST00000580446 ELL2O00472 640 aaPredicted RBP18.14■□□□□ 0.49
CSNK1D-213ENST00000580446 PLIN1O60240 522 aa18.14■□□□□ 0.49
CSNK1D-213ENST00000580446 TMPOP42166 694 aaKnown RBP18.14■□□□□ 0.49
CSNK1D-213ENST00000580446 C9orf50Q5SZB4 431 aa18.14■□□□□ 0.49
CSNK1D-213ENST00000580446 BDP1A6H8Y1 2624 aa18.14■□□□□ 0.49
CSNK1D-213ENST00000580446 MGAMO43451 1857 aa18.14■□□□□ 0.49
CSNK1D-213ENST00000580446 SHHQ15465 462 aa18.13■□□□□ 0.49
CSNK1D-213ENST00000580446 GADL1Q6ZQY3 521 aa18.13■□□□□ 0.49
CSNK1D-213ENST00000580446 ANKRD13CQ8N6S4 541 aa18.13■□□□□ 0.49
CSNK1D-213ENST00000580446 PPM1EQ8WY54 764 aa18.13■□□□□ 0.49
CSNK1D-213ENST00000580446 LBHD1Q9BQE6 289 aaPredicted RBP18.13■□□□□ 0.49
CSNK1D-213ENST00000580446 ZNF341Q9BYN7 854 aa18.13■□□□□ 0.49
CSNK1D-213ENST00000580446 HMX1Q9NP08 348 aaPredicted RBP18.13■□□□□ 0.49
CSNK1D-213ENST00000580446 OGDHLQ9ULD0 1010 aa18.13■□□□□ 0.49
CSNK1D-213ENST00000580446 HMGCRP04035 888 aa18.12■□□□□ 0.49
CSNK1D-213ENST00000580446 HOXB7P09629 217 aa18.11■□□□□ 0.49
CSNK1D-213ENST00000580446 CAPN2P17655 700 aa18.11■□□□□ 0.49
CSNK1D-213ENST00000580446 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
CSNK1D-213ENST00000580446 C15orf52Q6ZUT6 534 aaKnown RBP18.11■□□□□ 0.49
CSNK1D-213ENST00000580446 ADAMTS19Q8TE59 1207 aa18.11■□□□□ 0.49
CSNK1D-213ENST00000580446 COA7Q96BR5 231 aa18.11■□□□□ 0.49
CSNK1D-213ENST00000580446 PCGF6Q9BYE7 350 aa18.11■□□□□ 0.49
CSNK1D-213ENST00000580446 IQSEC3Q9UPP2 1182 aaPredicted RBP18.11■□□□□ 0.49
CSNK1D-213ENST00000580446 COL6A1P12109 1028 aa18.1■□□□□ 0.49
CSNK1D-213ENST00000580446 GYG1P46976 350 aa18.1■□□□□ 0.49
CSNK1D-213ENST00000580446 DCAF15Q66K64 600 aa18.1■□□□□ 0.49
CSNK1D-213ENST00000580446 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
CSNK1D-213ENST00000580446 SMCR8Q8TEV9 937 aaPredicted RBP18.1■□□□□ 0.49
CSNK1D-213ENST00000580446 TRIB2Q92519 343 aa18.09■□□□□ 0.49
CSNK1D-213ENST00000580446 NECAB3Q96P71 396 aaPredicted RBP18.09■□□□□ 0.49
CSNK1D-213ENST00000580446 LMOD3Q0VAK6 560 aa18.08■□□□□ 0.48
CSNK1D-213ENST00000580446 CHAF1AQ13111 956 aaPredicted RBP18.08■□□□□ 0.48
CSNK1D-213ENST00000580446 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.08■□□□□ 0.48
CSNK1D-213ENST00000580446 PRKAR2AP13861 404 aaKnown RBP18.07■□□□□ 0.48
CSNK1D-213ENST00000580446 ATN1P54259 1190 aaPredicted RBP18.07■□□□□ 0.48
CSNK1D-213ENST00000580446 TCP10Q12799 353 aa18.07■□□□□ 0.48
CSNK1D-213ENST00000580446 GRIN2CQ14957 1233 aa18.07■□□□□ 0.48
CSNK1D-213ENST00000580446 CCDC84Q86UT8 332 aaPredicted RBP18.07■□□□□ 0.48
CSNK1D-213ENST00000580446 PI4KAP2A4QPH2 592 aa18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 NEURL1BA8MQ27 555 aa18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 SLURP2P0DP57 97 aa18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 PI4KAP1Q8N8J0 262 aa18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 TDRD7Q8NHU6 1098 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 ZNF594Q96JF6 807 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 UHRF1Q96T88 793 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 MBIPQ9NS73 344 aa18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 TMOD2Q9NZR1 351 aa18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 ZHX2Q9Y6X8 837 aa18.06■□□□□ 0.48
CSNK1D-213ENST00000580446 A0A0G2JLL6 359 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-213ENST00000580446 H7C1W4 665 aa18.05■□□□□ 0.48
CSNK1D-213ENST00000580446 CYP2B6P20813 491 aa18.05■□□□□ 0.48
CSNK1D-213ENST00000580446 PRRT2Q7Z6L0 340 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-213ENST00000580446 PNNQ9H307 717 aaKnown RBP18.05■□□□□ 0.48
CSNK1D-213ENST00000580446 CHMP3Q9Y3E7 222 aa18.05■□□□□ 0.48
CSNK1D-213ENST00000580446 ANKRD18BA2A2Z9 1011 aa18.04■□□□□ 0.48
CSNK1D-213ENST00000580446 PEX10O60683 326 aa18.04■□□□□ 0.48
CSNK1D-213ENST00000580446 DDX58O95786 925 aaKnown RBP18.04■□□□□ 0.48
CSNK1D-213ENST00000580446 CCND3P30281 292 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-213ENST00000580446 APOBEC3HQ6NTF7 200 aaKnown RBP18.04■□□□□ 0.48
CSNK1D-213ENST00000580446 FAM83AQ86UY5 434 aa18.04■□□□□ 0.48
CSNK1D-213ENST00000580446 ZNF112Q9UJU3 913 aa18.04■□□□□ 0.48
CSNK1D-213ENST00000580446 GJD2Q9UKL4 321 aa18.04■□□□□ 0.48
CSNK1D-213ENST00000580446 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
CSNK1D-213ENST00000580446 CXCL11O14625 94 aa18.03■□□□□ 0.48
CSNK1D-213ENST00000580446 TREML2Q5T2D2 321 aa18.03■□□□□ 0.48
CSNK1D-213ENST00000580446 TEKT1Q969V4 418 aa18.03■□□□□ 0.48
CSNK1D-213ENST00000580446 HOOK2Q96ED9 719 aa18.03■□□□□ 0.48
CSNK1D-213ENST00000580446 SENP6Q9GZR1 1112 aaPredicted RBP18.03■□□□□ 0.48
CSNK1D-213ENST00000580446 MYH3P11055 1940 aa18.02■□□□□ 0.48
CSNK1D-213ENST00000580446 CSF1RP07333 972 aa18.02■□□□□ 0.48
CSNK1D-213ENST00000580446 HIBADHP31937 336 aaKnown RBP18.02■□□□□ 0.48
CSNK1D-213ENST00000580446 NOL9Q5SY16 702 aaKnown RBP18.02■□□□□ 0.48
CSNK1D-213ENST00000580446 FASTKD5Q7L8L6 764 aaKnown RBP18.02■□□□□ 0.48
CSNK1D-213ENST00000580446 ALYREFQ86V81 257 aaKnown RBP18.02■□□□□ 0.48
CSNK1D-213ENST00000580446 SNX27Q96L92 541 aa18.02■□□□□ 0.48
CSNK1D-213ENST00000580446 SYNGAP1Q96PV0 1343 aa18.01■□□□□ 0.47
CSNK1D-213ENST00000580446 PIEZO1Q92508 2521 aa18.01■□□□□ 0.47
CSNK1D-213ENST00000580446 CASP7P55210 303 aa18.01■□□□□ 0.47
CSNK1D-213ENST00000580446 SMAD3P84022 425 aaKnown RBP18.01■□□□□ 0.47
CSNK1D-213ENST00000580446 NFIAQ12857 509 aa18.01■□□□□ 0.47
CSNK1D-213ENST00000580446 MAP3K21Q5TCX8 1036 aa18.01■□□□□ 0.47
CSNK1D-213ENST00000580446 KSR2Q6VAB6 950 aa18.01■□□□□ 0.47
CSNK1D-213ENST00000580446 ZFPM1Q8IX07 1006 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms