RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 DLK2Q6UY11 383 aa11.8□□□□□ -0.52
SNX11-206ENST00000580219 Q7L0L9 218 aa11.8□□□□□ -0.52
SNX11-206ENST00000580219 DBNDD2Q9BQY9 259 aa11.8□□□□□ -0.52
SNX11-206ENST00000580219 LSG1Q9H089 658 aaKnown RBP11.8□□□□□ -0.52
SNX11-206ENST00000580219 BOLA2Q9H3K6 86 aa11.8□□□□□ -0.52
SNX11-206ENST00000580219 GBA2Q9HCG7 927 aaPredicted RBP11.8□□□□□ -0.52
SNX11-206ENST00000580219 NPHP1O15259 732 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 ITGA6P23229 1130 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 GTF2E1P29083 439 aaPredicted RBP11.79□□□□□ -0.52
SNX11-206ENST00000580219 ST5P78524 1137 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 LRRC24Q50LG9 513 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 SLC10A5Q5PT55 438 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 RTKN2Q8IZC4 609 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 C2orf69Q8N8R5 385 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 FSD1Q9BTV5 496 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 GPRC5DQ9NZD1 345 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 CHMP5Q9NZZ3 219 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 PGAP2Q9UHJ9 254 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
SNX11-206ENST00000580219 A0A1B0GUL7 405 aa11.78□□□□□ -0.52
SNX11-206ENST00000580219 FKTNO75072 461 aa11.78□□□□□ -0.52
SNX11-206ENST00000580219 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
SNX11-206ENST00000580219 DDIT3P35638 169 aa11.78□□□□□ -0.52
SNX11-206ENST00000580219 CWC27Q6UX04 472 aaKnown RBP11.78□□□□□ -0.52
SNX11-206ENST00000580219 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
SNX11-206ENST00000580219 KCNB2Q92953 911 aa11.78□□□□□ -0.52
SNX11-206ENST00000580219 ZNF594Q96JF6 807 aaPredicted RBP11.78□□□□□ -0.52
SNX11-206ENST00000580219 GREM2Q9H772 168 aa11.78□□□□□ -0.52
SNX11-206ENST00000580219 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
SNX11-206ENST00000580219 TRIM17Q9Y577 477 aa11.78□□□□□ -0.52
SNX11-206ENST00000580219 MED23Q9ULK4 1368 aa11.78□□□□□ -0.52
SNX11-206ENST00000580219 LRRFIP1Q32MZ4 808 aaKnown RBP11.77□□□□□ -0.53
SNX11-206ENST00000580219 CCDC152Q4G0S7 254 aa11.77□□□□□ -0.53
SNX11-206ENST00000580219 NOM1Q5C9Z4 860 aaKnown RBP11.77□□□□□ -0.53
SNX11-206ENST00000580219 CCDC158Q5M9N0 1113 aa11.77□□□□□ -0.53
SNX11-206ENST00000580219 LDHAL6AQ6ZMR3 332 aa11.77□□□□□ -0.53
SNX11-206ENST00000580219 USP48Q86UV5 1035 aa11.77□□□□□ -0.53
SNX11-206ENST00000580219 KBTBD3Q8NAB2 608 aa11.77□□□□□ -0.53
SNX11-206ENST00000580219 ZNF512BQ96KM6 892 aaPredicted RBP11.77□□□□□ -0.53
SNX11-206ENST00000580219 PUS3Q9BZE2 481 aaKnown RBP11.77□□□□□ -0.53
SNX11-206ENST00000580219 IL25Q9H293 177 aa11.77□□□□□ -0.53
SNX11-206ENST00000580219 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
SNX11-206ENST00000580219 CCDC171Q6TFL3 1326 aa11.77□□□□□ -0.53
SNX11-206ENST00000580219 MROH5Q6ZUA9 1318 aa11.77□□□□□ -0.53
SNX11-206ENST00000580219 A0A1W2PPC1 479 aa11.76□□□□□ -0.53
SNX11-206ENST00000580219 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
SNX11-206ENST00000580219 NMIQ13287 307 aaPredicted RBP11.76□□□□□ -0.53
SNX11-206ENST00000580219 METTL24Q5JXM2 366 aa11.76□□□□□ -0.53
SNX11-206ENST00000580219 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
SNX11-206ENST00000580219 RASAL3Q86YV0 1011 aa11.76□□□□□ -0.53
SNX11-206ENST00000580219 EFCAB3Q8N7B9 438 aa11.76□□□□□ -0.53
SNX11-206ENST00000580219 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
SNX11-206ENST00000580219 DPF3Q92784 378 aa11.76□□□□□ -0.53
SNX11-206ENST00000580219 NEUROD6Q96NK8 337 aa11.76□□□□□ -0.53
SNX11-206ENST00000580219 HSP90AA1P07900 732 aaKnown RBP11.75□□□□□ -0.53
SNX11-206ENST00000580219 TIMM10P62072 90 aa11.75□□□□□ -0.53
SNX11-206ENST00000580219 SF3B3Q15393 1217 aaKnown RBP11.75□□□□□ -0.53
SNX11-206ENST00000580219 NFKBIBQ15653 356 aa11.75□□□□□ -0.53
SNX11-206ENST00000580219 ATP2B3Q16720 1220 aa11.75□□□□□ -0.53
SNX11-206ENST00000580219 VGLL2Q8N8G2 317 aa11.75□□□□□ -0.53
SNX11-206ENST00000580219 MAP4K1Q92918 833 aa11.75□□□□□ -0.53
SNX11-206ENST00000580219 ARMC5Q96C12 935 aa11.75□□□□□ -0.53
SNX11-206ENST00000580219 NLRP3Q96P20 1036 aa11.75□□□□□ -0.53
SNX11-206ENST00000580219 TM6SF1Q9BZW5 370 aa11.75□□□□□ -0.53
SNX11-206ENST00000580219 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
SNX11-206ENST00000580219 CNNM1Q9NRU3 951 aa11.75□□□□□ -0.53
SNX11-206ENST00000580219 PAG1Q9NWQ8 432 aa11.75□□□□□ -0.53
SNX11-206ENST00000580219 KLRG2A4D1S0 409 aaPredicted RBP11.74□□□□□ -0.53
SNX11-206ENST00000580219 PDE8BO95263 885 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 ZFYP08048 801 aaPredicted RBP11.74□□□□□ -0.53
SNX11-206ENST00000580219 IFIT1P09914 478 aaKnown RBP11.74□□□□□ -0.53
SNX11-206ENST00000580219 NEK4P51957 841 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 HIRAP54198 1017 aaPredicted RBP11.74□□□□□ -0.53
SNX11-206ENST00000580219 GORABQ5T7V8 394 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 OTOP1Q7RTM1 612 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 XAGE2Q96GT9 111 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 FAM227BQ96M60 508 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 HELLSQ9NRZ9 838 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 MTMR10Q9NXD2 777 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 HMG20BQ9P0W2 317 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 SNX14Q9Y5W7 946 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 SNED1Q8TER0 1413 aa11.74□□□□□ -0.53
SNX11-206ENST00000580219 A0A0D9SFI3 127 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 STK25O00506 426 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 ZKSCAN1P17029 563 aaPredicted RBP11.73□□□□□ -0.53
SNX11-206ENST00000580219 NBR1Q14596 966 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 NECTIN1Q15223 517 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 PUM3Q15397 648 aaKnown RBP11.73□□□□□ -0.53
SNX11-206ENST00000580219 CRY2Q49AN0 593 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 MCMDC2Q4G0Z9 681 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 TTC39AQ5SRH9 613 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 RNF20Q5VTR2 975 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 TRPM4Q8TD43 1214 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 ARAP2Q8WZ64 1704 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
SNX11-206ENST00000580219 CDC5LQ99459 802 aaKnown RBP11.73□□□□□ -0.53
SNX11-206ENST00000580219 PSMD1Q99460 953 aa11.73□□□□□ -0.53
SNX11-206ENST00000580219 DNAJC2Q99543 621 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms