RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 TMC1Q8TDI8 760 aa11.4□□□□□ -0.58
PCAT18-201ENST00000579458 N4BP2L2Q92802 583 aaPredicted RBP11.4□□□□□ -0.58
PCAT18-201ENST00000579458 GTF2IRD1Q9UHL9 959 aa11.4□□□□□ -0.58
PCAT18-201ENST00000579458 XRRA1Q6P2D8 792 aa11.4□□□□□ -0.58
PCAT18-201ENST00000579458 CCBE1Q6UXH8 406 aaPredicted RBP11.4□□□□□ -0.58
PCAT18-201ENST00000579458 ELOA2Q8IYF1 753 aaPredicted RBP11.4□□□□□ -0.58
PCAT18-201ENST00000579458 WDR66Q8TBY9 1149 aa11.4□□□□□ -0.58
PCAT18-201ENST00000579458 POLR3CQ9BUI4 534 aaPredicted RBP11.4□□□□□ -0.58
PCAT18-201ENST00000579458 PLCB1Q9NQ66 1216 aa11.4□□□□□ -0.58
PCAT18-201ENST00000579458 ATG3Q9NT62 314 aa11.4□□□□□ -0.58
PCAT18-201ENST00000579458 WASLO00401 505 aaPredicted RBP11.39□□□□□ -0.59
PCAT18-201ENST00000579458 HPDP32754 393 aaPredicted RBP11.39□□□□□ -0.59
PCAT18-201ENST00000579458 NFKB2Q00653 900 aa11.39□□□□□ -0.59
PCAT18-201ENST00000579458 STK3Q13188 491 aa11.39□□□□□ -0.59
PCAT18-201ENST00000579458 NKX2-3Q8TAU0 364 aa11.39□□□□□ -0.59
PCAT18-201ENST00000579458 HOOK2Q96ED9 719 aa11.39□□□□□ -0.59
PCAT18-201ENST00000579458 FAM167BQ9BTA0 163 aa11.39□□□□□ -0.59
PCAT18-201ENST00000579458 EPRSP07814 1512 aaKnown RBP11.39□□□□□ -0.59
PCAT18-201ENST00000579458 MTHFD1P11586 935 aaKnown RBP11.39□□□□□ -0.59
PCAT18-201ENST00000579458 GALNT17Q6IS24 598 aa11.39□□□□□ -0.59
PCAT18-201ENST00000579458 ZNF396Q96N95 335 aaPredicted RBP11.39□□□□□ -0.59
PCAT18-201ENST00000579458 HERPUD2Q9BSE4 406 aa11.39□□□□□ -0.59
PCAT18-201ENST00000579458 RBCK1Q9BYM8 510 aa11.39□□□□□ -0.59
PCAT18-201ENST00000579458 VPS33BQ9H267 617 aa11.39□□□□□ -0.59
PCAT18-201ENST00000579458 PGAP2Q9UHJ9 254 aa11.39□□□□□ -0.59
PCAT18-201ENST00000579458 IGHA2P01877 340 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 RAC2P15153 192 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 KIF5BP33176 963 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 RCAN1P53805 252 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 DMTNQ08495 405 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 MTMR1Q13613 665 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.38□□□□□ -0.59
PCAT18-201ENST00000579458 CPLX2Q6PUV4 134 aaKnown RBP11.38□□□□□ -0.59
PCAT18-201ENST00000579458 ATXN2LQ8WWM7 1075 aaKnown RBP11.38□□□□□ -0.59
PCAT18-201ENST00000579458 KIF21BO75037 1637 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 KDM6BO15054 1643 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 GPR182O15218 404 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 ARIH2O95376 493 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 BIRC3Q13489 604 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 PIN1Q13526 163 aaPredicted RBP11.38□□□□□ -0.59
PCAT18-201ENST00000579458 NAA30Q147X3 362 aaPredicted RBP11.38□□□□□ -0.59
PCAT18-201ENST00000579458 HSP90B2PQ58FF3 399 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 PPP4R3BQ5MIZ7 849 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 PLBD1Q6P4A8 553 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 MZT2AQ6P582 158 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 GABPB2Q8TAK5 448 aaPredicted RBP11.38□□□□□ -0.59
PCAT18-201ENST00000579458 COPRSQ9NQ92 184 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 TPCN1Q9ULQ1 816 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 V9GY48 417 aaPredicted RBP11.38□□□□□ -0.59
PCAT18-201ENST00000579458 MAP3K4Q9Y6R4 1608 aa11.38□□□□□ -0.59
PCAT18-201ENST00000579458 IRS4O14654 1257 aaPredicted RBP11.37□□□□□ -0.59
PCAT18-201ENST00000579458 TRIM37O94972 964 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 GTF2A2P52657 109 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 PICALMQ13492 652 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 ERFEQ4G0M1 354 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 STAG2Q8N3U4 1231 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 MAGEB6Q8N7X4 407 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 ZMAT2Q96NC0 199 aaKnown RBP11.37□□□□□ -0.59
PCAT18-201ENST00000579458 NUDT12Q9BQG2 462 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 CSRNP2Q9H175 543 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 ZCCHC17Q9NP64 241 aaKnown RBP11.37□□□□□ -0.59
PCAT18-201ENST00000579458 FNIP2Q9P278 1114 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 KIAA1024Q9UPX6 916 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 TMEM127O75204 238 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 GFPT2O94808 682 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 HNRNPCP07910 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
PCAT18-201ENST00000579458 MYCLP1P12525 358 aaPredicted RBP11.37□□□□□ -0.59
PCAT18-201ENST00000579458 ECE1P42892 770 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 MRE11P49959 708 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 RBM5P52756 815 aaKnown RBP eCLIP11.37□□□□□ -0.59
PCAT18-201ENST00000579458 APBA1Q02410 837 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 C6orf118Q5T5N4 469 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 C1orf228Q6PIY5 440 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 CYP26C1Q6V0L0 522 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 NKAIN3Q8N8D7 197 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
PCAT18-201ENST00000579458 PRKRIP1Q9H875 184 aaPredicted RBP11.37□□□□□ -0.59
PCAT18-201ENST00000579458 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.37□□□□□ -0.59
PCAT18-201ENST00000579458 HOXC10Q9NYD6 342 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 DGKBQ9Y6T7 804 aa11.37□□□□□ -0.59
PCAT18-201ENST00000579458 SLC4A1P02730 911 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 HTR3AP46098 478 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 UBXN2AP68543 259 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 DIXDC1Q155Q3 683 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 OTOP3Q7RTS5 596 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 PJA1Q8NG27 643 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 TRPM4Q8TD43 1214 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 STRBPQ96SI9 672 aaKnown RBP11.36□□□□□ -0.59
PCAT18-201ENST00000579458 CEP83Q9Y592 693 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 TRIM64A6NGJ6 449 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 TRIM64BA6NI03 449 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 ASMTLO95671 621 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 TRIM27P14373 513 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 RXRGP48443 463 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 FAM102BQ5T8I3 360 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 LILRB1Q8NHL6 650 aaPredicted RBP11.36□□□□□ -0.59
PCAT18-201ENST00000579458 SMCR8Q8TEV9 937 aaPredicted RBP11.36□□□□□ -0.59
PCAT18-201ENST00000579458 ATP6V1E2Q96A05 226 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 RBSNQ9H1K0 784 aa11.36□□□□□ -0.59
PCAT18-201ENST00000579458 PLEKHA5Q9HAU0 1116 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms