RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 TFRCP02786 760 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-211ENST00000579316 IRF5Q13568 498 aa17.68■□□□□ 0.42
CSNK1D-211ENST00000579316 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.68■□□□□ 0.424e-6■■■□□ 14.8
CSNK1D-211ENST00000579316 PAWRQ96IZ0 340 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-211ENST00000579316 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
CSNK1D-211ENST00000579316 MYH16Q9H6N6 1097 aa17.68■□□□□ 0.42
CSNK1D-211ENST00000579316 BCAMP50895 628 aa17.67■□□□□ 0.42
CSNK1D-211ENST00000579316 CACNB3P54284 484 aa17.67■□□□□ 0.42
CSNK1D-211ENST00000579316 FOXO4P98177 505 aa17.67■□□□□ 0.42
CSNK1D-211ENST00000579316 WDR43Q15061 677 aaKnown RBP eCLIP17.67■□□□□ 0.42
CSNK1D-211ENST00000579316 NECAB2Q7Z6G3 386 aa17.67■□□□□ 0.42
CSNK1D-211ENST00000579316 TSPYL6Q8N831 410 aa17.67■□□□□ 0.42
CSNK1D-211ENST00000579316 ZNF341Q9BYN7 854 aa17.67■□□□□ 0.42
CSNK1D-211ENST00000579316 ELNP15502 786 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 HIBADHP31937 336 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 FLT3LGP49771 235 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 GRIK5Q16478 980 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 G2E3Q7L622 706 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 TDHQ8IZJ6 230 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 ANKLE1Q8NAG6 615 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 LINS1Q8NG48 757 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 FAM84BQ96KN1 310 aaPredicted RBP17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 MRIQ9BWK5 157 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 STK31Q9BXU1 1019 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 ZNF112Q9UJU3 913 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
CSNK1D-211ENST00000579316 INPP5BP32019 993 aa17.65■□□□□ 0.42
CSNK1D-211ENST00000579316 GYG1P46976 350 aa17.65■□□□□ 0.42
CSNK1D-211ENST00000579316 UBE4AQ14139 1066 aa17.65■□□□□ 0.42
CSNK1D-211ENST00000579316 GPAT2Q6NUI2 795 aa17.65■□□□□ 0.42
CSNK1D-211ENST00000579316 C7orf61Q8IZ16 206 aa17.65■□□□□ 0.42
CSNK1D-211ENST00000579316 DIS3LQ8TF46 1054 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-211ENST00000579316 TEKT1Q969V4 418 aa17.65■□□□□ 0.42
CSNK1D-211ENST00000579316 ZDHHC15Q96MV8 337 aa17.65■□□□□ 0.42
CSNK1D-211ENST00000579316 TMOD2Q9NZR1 351 aa17.65■□□□□ 0.42
CSNK1D-211ENST00000579316 CYP2C8P10632 490 aa17.64■□□□□ 0.41
CSNK1D-211ENST00000579316 NOL9Q5SY16 702 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-211ENST00000579316 ZMYND8Q9ULU4 1186 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-211ENST00000579316 MYBBP1AQ9BQG0 1328 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-211ENST00000579316 CXCL11O14625 94 aa17.63■□□□□ 0.41
CSNK1D-211ENST00000579316 MAGEA10P43363 369 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-211ENST00000579316 APOBEC3HQ6NTF7 200 aaKnown RBP17.63■□□□□ 0.41
CSNK1D-211ENST00000579316 LDHAL6AQ6ZMR3 332 aa17.63■□□□□ 0.41
CSNK1D-211ENST00000579316 TBC1D22AQ8WUA7 517 aa17.63■□□□□ 0.41
CSNK1D-211ENST00000579316 PLIN1O60240 522 aa17.62■□□□□ 0.41
CSNK1D-211ENST00000579316 MIGA2Q7L4E1 593 aa17.62■□□□□ 0.41
CSNK1D-211ENST00000579316 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
CSNK1D-211ENST00000579316 RPTORQ8N122 1335 aa17.62■□□□□ 0.41
CSNK1D-211ENST00000579316 LAMA2P24043 3122 aaKnown RBP17.61■□□□□ 0.41
CSNK1D-211ENST00000579316 SLC4A2P04920 1241 aa17.61■□□□□ 0.41
CSNK1D-211ENST00000579316 FLIIQ13045 1269 aa17.61■□□□□ 0.41
CSNK1D-211ENST00000579316 FAM109BQ6ICB4 259 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-211ENST00000579316 ZNF594Q96JF6 807 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-211ENST00000579316 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.61■□□□□ 0.412e-11■■■■■ 46.5
CSNK1D-211ENST00000579316 CNNM1Q9NRU3 951 aa17.61■□□□□ 0.41
CSNK1D-211ENST00000579316 SLC45A1Q9Y2W3 748 aa17.61■□□□□ 0.41
CSNK1D-211ENST00000579316 CHMP3Q9Y3E7 222 aa17.61■□□□□ 0.41
CSNK1D-211ENST00000579316 TNPO2O14787 897 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-211ENST00000579316 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
CSNK1D-211ENST00000579316 LMBR1LQ6UX01 489 aa17.6■□□□□ 0.41
CSNK1D-211ENST00000579316 FBXO33Q7Z6M2 555 aa17.6■□□□□ 0.41
CSNK1D-211ENST00000579316 NBPF3Q9H094 633 aa17.6■□□□□ 0.41
CSNK1D-211ENST00000579316 PRDM6Q9NQX0 595 aa17.6■□□□□ 0.41
CSNK1D-211ENST00000579316 COL2A1P02458 1487 aaPredicted RBP17.6■□□□□ 0.41
CSNK1D-211ENST00000579316 EYSQ5T1H1 3165 aa17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 DOCK3Q8IZD9 2030 aa17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 MAST3O60307 1309 aa17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 A0A0G2JLL6 359 aaPredicted RBP17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 APAF1O14727 1248 aa17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 HHIPL2Q6UWX4 724 aa17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 PRRT2Q7Z6L0 340 aaPredicted RBP17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 FAM151AQ8WW52 585 aa17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 GUCD1Q96NT3 240 aa17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 UBE2OQ9C0C9 1292 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 SUGT1Q9Y2Z0 365 aa17.59■□□□□ 0.41
CSNK1D-211ENST00000579316 POTEB2H3BUK9 544 aa17.58■□□□□ 0.4
CSNK1D-211ENST00000579316 SYN1P17600 705 aa17.58■□□□□ 0.4
CSNK1D-211ENST00000579316 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.4
CSNK1D-211ENST00000579316 EPHA10Q5JZY3 1008 aa17.58■□□□□ 0.4
CSNK1D-211ENST00000579316 FASTKD5Q7L8L6 764 aaKnown RBP17.58■□□□□ 0.4
CSNK1D-211ENST00000579316 DDX60LQ5H9U9 1706 aaKnown RBP17.58■□□□□ 0.4
CSNK1D-211ENST00000579316 CHAF1AQ13111 956 aaPredicted RBP17.57■□□□□ 0.4
CSNK1D-211ENST00000579316 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
CSNK1D-211ENST00000579316 MUC3AQ02505 3323 aa17.56■□□□□ 0.4
CSNK1D-211ENST00000579316 TWISTNBQ3B726 338 aaPredicted RBP17.56■□□□□ 0.4
CSNK1D-211ENST00000579316 COA7Q96BR5 231 aa17.56■□□□□ 0.4
CSNK1D-211ENST00000579316 C11orf49Q9H6J7 331 aa17.56■□□□□ 0.4
CSNK1D-211ENST00000579316 PRUNE2Q8WUY3 3088 aa17.56■□□□□ 0.4
CSNK1D-211ENST00000579316 CACNA1FO60840 1977 aa17.56■□□□□ 0.4
CSNK1D-211ENST00000579316 ATRNL1Q5VV63 1379 aa17.55■□□□□ 0.4
CSNK1D-211ENST00000579316 PTPRFP10586 1907 aa17.55■□□□□ 0.4
CSNK1D-211ENST00000579316 HMGCRP04035 888 aa17.55■□□□□ 0.4
CSNK1D-211ENST00000579316 VPS37DQ86XT2 251 aa17.55■□□□□ 0.4
CSNK1D-211ENST00000579316 TSR2Q969E8 191 aaKnown RBP17.55■□□□□ 0.4
CSNK1D-211ENST00000579316 OGDHLQ9ULD0 1010 aa17.55■□□□□ 0.4
CSNK1D-211ENST00000579316 IQSEC3Q9UPP2 1182 aaPredicted RBP17.55■□□□□ 0.4
CSNK1D-211ENST00000579316 MROH5Q6ZUA9 1318 aa17.54■□□□□ 0.4
CSNK1D-211ENST00000579316 BEND3Q5T5X7 828 aa17.54■□□□□ 0.4
CSNK1D-211ENST00000579316 SMCR8Q8TEV9 937 aaPredicted RBP17.54■□□□□ 0.4
CSNK1D-211ENST00000579316 PHF20L1A8MW92 1017 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms