RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SKAP1Q86WV1 359 aa13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 MTMR14Q8NCE2 650 aa13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 RUFY2Q8WXA3 655 aa13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 ZDHHC15Q96MV8 337 aa13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 TMOD2Q9NZR1 351 aa13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 GAKO14976 1311 aa13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 ZNF532Q9HCE3 1301 aa13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
CDK5RAP3-210ENST00000578733 KIF4BQ2VIQ3 1234 aa13.57□□□□□ -0.24
CDK5RAP3-210ENST00000578733 USP50Q70EL3 339 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-210ENST00000578733 APPBP2Q92624 585 aa13.57□□□□□ -0.24
CDK5RAP3-210ENST00000578733 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
CDK5RAP3-210ENST00000578733 FAM163AQ96GL9 167 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-210ENST00000578733 PRDM10Q9NQV6 1147 aa13.57□□□□□ -0.24
CDK5RAP3-210ENST00000578733 HELLSQ9NRZ9 838 aa13.57□□□□□ -0.24
CDK5RAP3-210ENST00000578733 BAZ2AQ9UIF9 1905 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-210ENST00000578733 MAGEB6P1A0A0J9YX57 407 aa13.56□□□□□ -0.24
CDK5RAP3-210ENST00000578733 CDC45O75419 566 aa13.56□□□□□ -0.24
CDK5RAP3-210ENST00000578733 SLC34A2O95436 690 aa13.56□□□□□ -0.24
CDK5RAP3-210ENST00000578733 EPHX2P34913 555 aa13.56□□□□□ -0.24
CDK5RAP3-210ENST00000578733 GRIK5Q16478 980 aa13.56□□□□□ -0.24
CDK5RAP3-210ENST00000578733 RBM26Q5T8P6 1007 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-210ENST00000578733 DAGLAQ9Y4D2 1042 aa13.56□□□□□ -0.24
CDK5RAP3-210ENST00000578733 RAD50Q92878 1312 aa13.56□□□□□ -0.24
CDK5RAP3-210ENST00000578733 LAMB1P07942 1786 aa13.55□□□□□ -0.24
CDK5RAP3-210ENST00000578733 GPR75-ASB3A0A0A6YYF3 556 aa13.55□□□□□ -0.24
CDK5RAP3-210ENST00000578733 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
CDK5RAP3-210ENST00000578733 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
CDK5RAP3-210ENST00000578733 EPS15P42566 896 aa13.55□□□□□ -0.24
CDK5RAP3-210ENST00000578733 BTDP43251 543 aa13.55□□□□□ -0.24
CDK5RAP3-210ENST00000578733 TBC1D10BQ4KMP7 808 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-210ENST00000578733 DDRGK1Q96HY6 314 aa13.55□□□□□ -0.24
CDK5RAP3-210ENST00000578733 AATFQ9NY61 560 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDK5RAP3-210ENST00000578733 TCRBV5S4A2TA0A5A2 114 aa13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 GNAT2P19087 354 aa13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 TNNI2P48788 182 aa13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 PPP4CP60510 307 aa13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 TNFAIP1Q13829 316 aa13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 MCMDC2Q4G0Z9 681 aa13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 ZMYM1Q5SVZ6 1142 aa13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 SAMD7Q7Z3H4 446 aa13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 CRNKL1Q9BZJ0 848 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 TAF1DQ9H5J8 278 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-210ENST00000578733 POTECB2RU33 542 aa13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 WNT10BO00744 389 aa13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 MBD4O95243 580 aa13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 CHMLP26374 656 aa13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 NMIQ13287 307 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 EAPPQ56P03 285 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 CWC27Q6UX04 472 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 APOBEC3FQ8IUX4 373 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 TEX11Q8IYF3 940 aa13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 MIGA1Q8NAN2 632 aa13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 ZNF384Q8TF68 577 aa13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 USP40Q9NVE5 1235 aa13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 LAMA4Q16363 1823 aa13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 TRPM7Q96QT4 1865 aa13.53□□□□□ -0.24
CDK5RAP3-210ENST00000578733 GPAA1O43292 621 aa13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 CTCFP49711 727 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 APOBEC3HQ6NTF7 200 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 ADGRA1Q86SQ6 560 aa13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 AMOTL1Q8IY63 956 aa13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 TRPM4Q8TD43 1214 aa13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 DCPSQ96C86 337 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 ZBED3Q96IU2 234 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 PRMT6Q96LA8 375 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 NACAP1Q9BZK3 213 aa13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 VEZTQ9HBM0 779 aa13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 MKRN1Q9UHC7 482 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 PITPNM2Q9BZ72 1349 aa13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 CNTNAP1P78357 1384 aa13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 RPAP1Q9BWH6 1393 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-210ENST00000578733 CCDC171Q6TFL3 1326 aa13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 SHTN1A0MZ66 631 aa13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 FOXN1O15353 648 aa13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 USP5P45974 858 aa13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 NBPF9Q3BBW0 867 aa13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 FKBP1CQ5VVH2 108 aa13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 KIAA1211Q6ZU35 1233 aa13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 OSBP2Q969R2 916 aa13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 RIOK1Q9BRS2 568 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 PUS7LQ9H0K6 701 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 TDRD3Q9H7E2 651 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 ZNF70Q9UC06 446 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-210ENST00000578733 DDX60LQ5H9U9 1706 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-210ENST00000578733 A0A0D9SFI3 127 aa13.5□□□□□ -0.25
CDK5RAP3-210ENST00000578733 DYNLL1P63167 89 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-210ENST00000578733 CDC42EP5Q6NZY7 148 aa13.5□□□□□ -0.25
CDK5RAP3-210ENST00000578733 SULF1Q8IWU6 871 aa13.5□□□□□ -0.25
CDK5RAP3-210ENST00000578733 LCORLQ8N3X6 602 aa13.5□□□□□ -0.25
CDK5RAP3-210ENST00000578733 SH3RF3Q8TEJ3 882 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-210ENST00000578733 FAM227BQ96M60 508 aa13.5□□□□□ -0.25
CDK5RAP3-210ENST00000578733 ARMT1Q9H993 441 aa13.5□□□□□ -0.25
CDK5RAP3-210ENST00000578733 ATP8A2Q9NTI2 1148 aa13.5□□□□□ -0.25
CDK5RAP3-210ENST00000578733 GGA3Q9NZ52 723 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms