RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 DCAF8Q5TAQ9 597 aa27.11■■□□□ 1.93
LIMD2-205ENST00000578402 RTKN2Q8IZC4 609 aa27.11■■□□□ 1.93
LIMD2-205ENST00000578402 NBPF3Q9H094 633 aa27.11■■□□□ 1.93
LIMD2-205ENST00000578402 MROH7-TTC4A0A0A0MT08 1334 aa27.11■■□□□ 1.93
LIMD2-205ENST00000578402 BAG3O95817 575 aa27.11■■□□□ 1.93
LIMD2-205ENST00000578402 GTF2IP78347 998 aa27.11■■□□□ 1.93
LIMD2-205ENST00000578402 TRDNQ13061 729 aa27.11■■□□□ 1.93
LIMD2-205ENST00000578402 SOGA3Q5TF21 947 aa27.11■■□□□ 1.93
LIMD2-205ENST00000578402 RALYLQ86SE5 291 aaKnown RBP27.11■■□□□ 1.93
LIMD2-205ENST00000578402 FAM163AQ96GL9 167 aaPredicted RBP27.11■■□□□ 1.93
LIMD2-205ENST00000578402 ATP8A2Q9NTI2 1148 aa27.11■■□□□ 1.93
LIMD2-205ENST00000578402 FOXD4L1Q9NU39 408 aa27.11■■□□□ 1.93
LIMD2-205ENST00000578402 AATFQ9NY61 560 aaKnown RBP eCLIP27.11■■□□□ 1.93
LIMD2-205ENST00000578402 GRIK5Q16478 980 aa27.1■■□□□ 1.93
LIMD2-205ENST00000578402 Q6ZUG5 572 aa27.1■■□□□ 1.93
LIMD2-205ENST00000578402 TBC1D10CQ8IV04 446 aa27.1■■□□□ 1.93
LIMD2-205ENST00000578402 MB21D2Q8IYB1 491 aaPredicted RBP27.1■■□□□ 1.93
LIMD2-205ENST00000578402 SGIP1Q9BQI5 828 aa27.1■■□□□ 1.93
LIMD2-205ENST00000578402 ANAPC4Q9UJX5 808 aa27.1■■□□□ 1.93
LIMD2-205ENST00000578402 C21orf2O43822 256 aa27.09■■□□□ 1.93
LIMD2-205ENST00000578402 MCM5P33992 734 aa27.09■■□□□ 1.93
LIMD2-205ENST00000578402 FKBP1AP62942 108 aaKnown RBP27.09■■□□□ 1.93
LIMD2-205ENST00000578402 KIAA2012Q0VF49 1180 aa27.09■■□□□ 1.93
LIMD2-205ENST00000578402 DOK7Q18PE1 504 aa27.09■■□□□ 1.93
LIMD2-205ENST00000578402 SDR42E1Q8WUS8 393 aa27.09■■□□□ 1.93
LIMD2-205ENST00000578402 TCEANC2Q96MN5 208 aa27.09■■□□□ 1.93
LIMD2-205ENST00000578402 PSMD1Q99460 953 aa27.09■■□□□ 1.93
LIMD2-205ENST00000578402 NOL10Q9BSC4 688 aaKnown RBP27.09■■□□□ 1.93
LIMD2-205ENST00000578402 TPCN1Q9ULQ1 816 aa27.09■■□□□ 1.93
LIMD2-205ENST00000578402 CNNM2Q9H8M5 875 aa27.08■■□□□ 1.93
LIMD2-205ENST00000578402 ZNF219Q9P2Y4 722 aaPredicted RBP27.08■■□□□ 1.93
LIMD2-205ENST00000578402 MYH2Q9UKX2 1941 aa27.08■■□□□ 1.93
LIMD2-205ENST00000578402 GAKO14976 1311 aa27.07■■□□□ 1.92
LIMD2-205ENST00000578402 STAG1Q8WVM7 1258 aa27.07■■□□□ 1.92
LIMD2-205ENST00000578402 RNF41Q9H4P4 317 aaPredicted RBP27.07■■□□□ 1.92
LIMD2-205ENST00000578402 PIM2Q9P1W9 311 aa27.07■■□□□ 1.92
LIMD2-205ENST00000578402 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.07■■□□□ 1.92
LIMD2-205ENST00000578402 DIXDC1Q155Q3 683 aa27.06■■□□□ 1.92
LIMD2-205ENST00000578402 ME3Q16798 604 aa27.06■■□□□ 1.92
LIMD2-205ENST00000578402 AKNAD1Q5T1N1 836 aa27.06■■□□□ 1.92
LIMD2-205ENST00000578402 VPS33BQ9H267 617 aa27.06■■□□□ 1.92
LIMD2-205ENST00000578402 CD2APQ9Y5K6 639 aa27.06■■□□□ 1.92
LIMD2-205ENST00000578402 GPR75-ASB3A0A0A6YYF3 556 aa27.06■■□□□ 1.92
LIMD2-205ENST00000578402 PLCG2P16885 1265 aa27.06■■□□□ 1.92
LIMD2-205ENST00000578402 FGD1P98174 961 aa27.06■■□□□ 1.92
LIMD2-205ENST00000578402 PPARAQ07869 468 aa27.06■■□□□ 1.92
LIMD2-205ENST00000578402 ECE2O60344 883 aa27.05■■□□□ 1.92
LIMD2-205ENST00000578402 LARGE1O95461 756 aa27.05■■□□□ 1.92
LIMD2-205ENST00000578402 PCP11498 1178 aaKnown RBP27.05■■□□□ 1.92
LIMD2-205ENST00000578402 NUCB2P80303 420 aa27.05■■□□□ 1.92
LIMD2-205ENST00000578402 STRIP1Q5VSL9 837 aa27.05■■□□□ 1.92
LIMD2-205ENST00000578402 KRT23Q9C075 422 aa27.05■■□□□ 1.92
LIMD2-205ENST00000578402 DBNDD1Q9H9R9 158 aa27.05■■□□□ 1.92
LIMD2-205ENST00000578402 DCP1AQ9NPI6 582 aaPredicted RBP27.05■■□□□ 1.92
LIMD2-205ENST00000578402 BRCA1P38398 1863 aaKnown RBP27.04■■□□□ 1.92
LIMD2-205ENST00000578402 MFSD6Q6ZSS7 791 aa27.04■■□□□ 1.92
LIMD2-205ENST00000578402 BRF1Q92994 677 aa27.04■■□□□ 1.92
LIMD2-205ENST00000578402 LARP6Q9BRS8 491 aaKnown RBP27.04■■□□□ 1.92
LIMD2-205ENST00000578402 PRC1O43663 620 aa27.03■■□□□ 1.92
LIMD2-205ENST00000578402 EVCP57679 992 aa27.03■■□□□ 1.92
LIMD2-205ENST00000578402 RAB3GAP1Q15042 981 aa27.03■■□□□ 1.92
LIMD2-205ENST00000578402 SBK1Q52WX2 424 aa27.03■■□□□ 1.92
LIMD2-205ENST00000578402 ARPP21Q9UBL0 812 aaPredicted RBP27.03■■□□□ 1.92
LIMD2-205ENST00000578402 LAMB1P07942 1786 aa27.02■■□□□ 1.92
LIMD2-205ENST00000578402 CERS5Q8N5B7 392 aa27.02■■□□□ 1.92
LIMD2-205ENST00000578402 FBXW7Q969H0 707 aa27.02■■□□□ 1.92
LIMD2-205ENST00000578402 MTA3Q9BTC8 594 aa27.02■■□□□ 1.92
LIMD2-205ENST00000578402 ZNF646O15015 1829 aaPredicted RBP27.02■■□□□ 1.92
LIMD2-205ENST00000578402 NEDD4P46934 1319 aa27.02■■□□□ 1.92
LIMD2-205ENST00000578402 ANTXR2P58335 489 aa27.01■■□□□ 1.91
LIMD2-205ENST00000578402 CTDSPL2Q05D32 466 aa27.01■■□□□ 1.91
LIMD2-205ENST00000578402 AOC3Q16853 763 aa27.01■■□□□ 1.91
LIMD2-205ENST00000578402 PPIP5K2O43314 1243 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 BTDP43251 543 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 DALRD3Q5D0E6 543 aaKnown RBP27■■□□□ 1.91
LIMD2-205ENST00000578402 CTR9Q6PD62 1173 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 CCDC83Q8IWF9 413 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 CHMP4CQ96CF2 233 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 ZNF274Q96GC6 653 aaPredicted RBP27■■□□□ 1.91
LIMD2-205ENST00000578402 TMEM87BQ96K49 555 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 LRRC2Q9BYS8 371 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 MKRN1Q9UHC7 482 aaKnown RBP27■■□□□ 1.91
LIMD2-205ENST00000578402 BAZ2AQ9UIF9 1905 aaKnown RBP27■■□□□ 1.91
LIMD2-205ENST00000578402 USP17L3A6NCW0 530 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 USP17L4A6NCW7 530 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 PTGER2P43116 358 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 NT5C2P49902 561 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 ST3GAL1Q11201 340 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 USP17L1Q7RTZ2 530 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 SH3RF3Q8TEJ3 882 aaPredicted RBP27■■□□□ 1.91
LIMD2-205ENST00000578402 MRIQ9BWK5 157 aa27■■□□□ 1.91
LIMD2-205ENST00000578402 MINDY4BA8MYZ0 360 aa26.99■■□□□ 1.91
LIMD2-205ENST00000578402 B4E1Z4 1266 aa26.99■■□□□ 1.91
LIMD2-205ENST00000578402 FGRP09769 529 aa26.99■■□□□ 1.91
LIMD2-205ENST00000578402 DACT2Q5SW24 774 aa26.99■■□□□ 1.91
LIMD2-205ENST00000578402 HHIPL2Q6UWX4 724 aa26.99■■□□□ 1.91
LIMD2-205ENST00000578402 GTF3C6Q969F1 213 aa26.99■■□□□ 1.91
LIMD2-205ENST00000578402 TTF2Q9UNY4 1162 aaKnown RBP26.99■■□□□ 1.91
LIMD2-205ENST00000578402 DAGLAQ9Y4D2 1042 aa26.99■■□□□ 1.91
LIMD2-205ENST00000578402 SCN9AQ15858 1988 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms