RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 HSP90AA1P07900 732 aaKnown RBP22.03■■□□□ 1.12
PRKCA-203ENST00000578063 CPA1P15085 419 aa22.03■■□□□ 1.12
PRKCA-203ENST00000578063 AK2P54819 239 aa22.03■■□□□ 1.12
PRKCA-203ENST00000578063 HAND2P61296 217 aa22.03■■□□□ 1.12
PRKCA-203ENST00000578063 DIXDC1Q155Q3 683 aa22.03■■□□□ 1.12
PRKCA-203ENST00000578063 STRIP1Q5VSL9 837 aa22.03■■□□□ 1.12
PRKCA-203ENST00000578063 PPP4CP60510 307 aa22.03■■□□□ 1.12
PRKCA-203ENST00000578063 ANKRD1Q15327 319 aa22.03■■□□□ 1.12
PRKCA-203ENST00000578063 FAM163AQ96GL9 167 aaPredicted RBP22.03■■□□□ 1.12
PRKCA-203ENST00000578063 CHD4Q14839 1912 aa22.03■■□□□ 1.12
PRKCA-203ENST00000578063 SDR42E1Q8WUS8 393 aa22.02■■□□□ 1.12
PRKCA-203ENST00000578063 GAKO14976 1311 aa22.01■■□□□ 1.11
PRKCA-203ENST00000578063 CERS5Q8N5B7 392 aa22.01■■□□□ 1.11
PRKCA-203ENST00000578063 TMX3Q96JJ7 454 aa22.01■■□□□ 1.11
PRKCA-203ENST00000578063 ATP8A2Q9NTI2 1148 aa22.01■■□□□ 1.11
PRKCA-203ENST00000578063 LIMCH1Q9UPQ0 1083 aa22.01■■□□□ 1.11
PRKCA-203ENST00000578063 TIAM2Q8IVF5 1701 aa22.01■■□□□ 1.11
PRKCA-203ENST00000578063 USP17L3A6NCW0 530 aa22■■□□□ 1.11
PRKCA-203ENST00000578063 USP17L4A6NCW7 530 aa22■■□□□ 1.11
PRKCA-203ENST00000578063 DHX32Q7L7V1 743 aaKnown RBP22■■□□□ 1.11
PRKCA-203ENST00000578063 USP17L1Q7RTZ2 530 aa22■■□□□ 1.11
PRKCA-203ENST00000578063 GPR75-ASB3A0A0A6YYF3 556 aa22■■□□□ 1.11
PRKCA-203ENST00000578063 PLCG2P16885 1265 aa22■■□□□ 1.11
PRKCA-203ENST00000578063 RALYLQ86SE5 291 aaKnown RBP22■■□□□ 1.11
PRKCA-203ENST00000578063 NCOA7Q8NI08 942 aa22■■□□□ 1.11
PRKCA-203ENST00000578063 TRDNQ13061 729 aa21.99■■□□□ 1.11
PRKCA-203ENST00000578063 DACT2Q5SW24 774 aa21.99■■□□□ 1.11
PRKCA-203ENST00000578063 NOL8Q76FK4 1167 aaKnown RBP21.99■■□□□ 1.11
PRKCA-203ENST00000578063 TBC1D10CQ8IV04 446 aa21.99■■□□□ 1.11
PRKCA-203ENST00000578063 SPRYD3Q8NCJ5 442 aa21.99■■□□□ 1.11
PRKCA-203ENST00000578063 NBPF3Q9H094 633 aa21.99■■□□□ 1.11
PRKCA-203ENST00000578063 SLKQ9H2G2 1235 aaPredicted RBP21.99■■□□□ 1.11
PRKCA-203ENST00000578063 BTDP43251 543 aa21.98■■□□□ 1.11
PRKCA-203ENST00000578063 LARGE2Q8N3Y3 721 aa21.98■■□□□ 1.11
PRKCA-203ENST00000578063 TTF2Q9UNY4 1162 aaKnown RBP21.98■■□□□ 1.11
PRKCA-203ENST00000578063 CUL4AQ13619 759 aa21.97■■□□□ 1.11
PRKCA-203ENST00000578063 COL9A3Q14050 684 aaPredicted RBP21.97■■□□□ 1.11
PRKCA-203ENST00000578063 ZSCAN31Q96LW9 406 aaPredicted RBP21.97■■□□□ 1.11
PRKCA-203ENST00000578063 TAOK3Q9H2K8 898 aa21.97■■□□□ 1.11
PRKCA-203ENST00000578063 DCP1AQ9NPI6 582 aaPredicted RBP21.97■■□□□ 1.11
PRKCA-203ENST00000578063 ZNF277Q9NRM2 450 aaPredicted RBP21.97■■□□□ 1.11
PRKCA-203ENST00000578063 ANAPC4Q9UJX5 808 aa21.97■■□□□ 1.11
PRKCA-203ENST00000578063 MYH2Q9UKX2 1941 aa21.97■■□□□ 1.11
PRKCA-203ENST00000578063 WDR19Q8NEZ3 1342 aa21.97■■□□□ 1.11
PRKCA-203ENST00000578063 EXOSC10Q01780 885 aaKnown RBP21.97■■□□□ 1.11
PRKCA-203ENST00000578063 PPARAQ07869 468 aa21.97■■□□□ 1.11
PRKCA-203ENST00000578063 RNF41Q9H4P4 317 aaPredicted RBP21.97■■□□□ 1.11
PRKCA-203ENST00000578063 KCNQ5Q9NR82 932 aa21.97■■□□□ 1.11
PRKCA-203ENST00000578063 SH2B1Q9NRF2 756 aaPredicted RBP21.97■■□□□ 1.11
PRKCA-203ENST00000578063 ARPP21Q9UBL0 812 aaPredicted RBP21.97■■□□□ 1.11
PRKCA-203ENST00000578063 BCS1LQ9Y276 419 aa21.97■■□□□ 1.11
PRKCA-203ENST00000578063 IARSP41252 1262 aaKnown RBP21.96■■□□□ 1.11
PRKCA-203ENST00000578063 AKNAD1Q5T1N1 836 aa21.96■■□□□ 1.11
PRKCA-203ENST00000578063 MB21D2Q8IYB1 491 aaPredicted RBP21.96■■□□□ 1.11
PRKCA-203ENST00000578063 SH3RF3Q8TEJ3 882 aaPredicted RBP21.96■■□□□ 1.11
PRKCA-203ENST00000578063 STAG1Q8WVM7 1258 aa21.96■■□□□ 1.11
PRKCA-203ENST00000578063 TCEANC2Q96MN5 208 aa21.96■■□□□ 1.11
PRKCA-203ENST00000578063 MXD3Q9BW11 206 aa21.96■■□□□ 1.11
PRKCA-203ENST00000578063 CNNM2Q9H8M5 875 aa21.96■■□□□ 1.11
PRKCA-203ENST00000578063 DAGLAQ9Y4D2 1042 aa21.96■■□□□ 1.11
PRKCA-203ENST00000578063 SCN9AQ15858 1988 aa21.95■■□□□ 1.11
PRKCA-203ENST00000578063 YDJCA8MPS7 323 aa21.95■■□□□ 1.1
PRKCA-203ENST00000578063 F8W031 263 aaPredicted RBP21.95■■□□□ 1.1
PRKCA-203ENST00000578063 MCM5P33992 734 aa21.95■■□□□ 1.1
PRKCA-203ENST00000578063 USP5P45974 858 aa21.95■■□□□ 1.1
PRKCA-203ENST00000578063 TOB2Q14106 344 aaPredicted RBP21.95■■□□□ 1.1
PRKCA-203ENST00000578063 HHIPL2Q6UWX4 724 aa21.95■■□□□ 1.1
PRKCA-203ENST00000578063 Q6ZUG5 572 aa21.95■■□□□ 1.1
PRKCA-203ENST00000578063 INTS4Q96HW7 963 aaKnown RBP21.95■■□□□ 1.1
PRKCA-203ENST00000578063 ZNF646O15015 1829 aaPredicted RBP21.95■■□□□ 1.1
PRKCA-203ENST00000578063 FGD1P98174 961 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 HDLBPQ00341 1268 aaKnown RBP21.94■■□□□ 1.1
PRKCA-203ENST00000578063 NIM1KQ8IY84 436 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 FBXL16Q8N461 479 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 NLGN2Q8NFZ4 835 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 TEKT1Q969V4 418 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 MRIQ9BWK5 157 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 MYO3BQ8WXR4 1341 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 LTBP3Q9NS15 1303 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 FER1L6Q2WGJ9 1857 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 PCP11498 1178 aaKnown RBP21.94■■□□□ 1.1
PRKCA-203ENST00000578063 CTDSPL2Q05D32 466 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 SBK1Q52WX2 424 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 MFSD6Q6ZSS7 791 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 AGXT2Q9BYV1 514 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 KRT23Q9C075 422 aa21.94■■□□□ 1.1
PRKCA-203ENST00000578063 MINDY4BA8MYZ0 360 aa21.93■■□□□ 1.1
PRKCA-203ENST00000578063 DDIT3P35638 169 aa21.93■■□□□ 1.1
PRKCA-203ENST00000578063 CTR9Q6PD62 1173 aa21.93■■□□□ 1.1
PRKCA-203ENST00000578063 MKRN1Q9UHC7 482 aaKnown RBP21.93■■□□□ 1.1
PRKCA-203ENST00000578063 CIZ1Q9ULV3 898 aaPredicted RBP21.93■■□□□ 1.1
PRKCA-203ENST00000578063 NEDD4P46934 1319 aa21.93■■□□□ 1.1
PRKCA-203ENST00000578063 USP17L12C9JPN9 530 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 USP17L21D6R901 530 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 NFKBIEO00221 500 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 RHBDL3P58872 404 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 TEX11Q8IYF3 940 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 CWC22Q9HCG8 908 aaKnown RBP21.92■■□□□ 1.1
PRKCA-203ENST00000578063 FOXD4L1Q9NU39 408 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 TPCN1Q9ULQ1 816 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms