RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 GRIN3AQ8TCU5 1115 aa6.69□□□□□ -1.34
KRT39-202ENST00000578029 ADAM19Q9H013 955 aa6.69□□□□□ -1.34
KRT39-202ENST00000578029 METTL14Q9HCE5 456 aaKnown RBP6.69□□□□□ -1.34
KRT39-202ENST00000578029 ATP13A2Q9NQ11 1180 aa6.69□□□□□ -1.34
KRT39-202ENST00000578029 PCDHB14Q9Y5E9 798 aa6.69□□□□□ -1.34
KRT39-202ENST00000578029 SIN3BO75182 1162 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 ATE1O95260 518 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 ESRRAP11474 423 aaPredicted RBP6.68□□□□□ -1.34
KRT39-202ENST00000578029 CPB1P15086 417 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 ITGA6P23229 1130 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 CABP4P57796 275 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 CTBSQ01459 385 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 LRRFIP1Q32MZ4 808 aaKnown RBP6.68□□□□□ -1.34
KRT39-202ENST00000578029 ZNF468Q5VIY5 522 aaPredicted RBP6.68□□□□□ -1.34
KRT39-202ENST00000578029 ELMSAN1Q6PJG2 1045 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 C19orf47Q8N9M1 422 aaKnown RBP6.68□□□□□ -1.34
KRT39-202ENST00000578029 STK35Q8TDR2 534 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 MICAL1Q8TDZ2 1067 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 TNKS2Q9H2K2 1166 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 PCDH12Q9NPG4 1184 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 AAASQ9NRG9 546 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 TMEM260Q9NX78 707 aa6.68□□□□□ -1.34
KRT39-202ENST00000578029 ESYT3A0FGR9 886 aa6.67□□□□□ -1.34
KRT39-202ENST00000578029 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
KRT39-202ENST00000578029 ZNF252P-AS1Q0IIN9 211 aa6.67□□□□□ -1.34
KRT39-202ENST00000578029 AP3B2Q13367 1082 aa6.67□□□□□ -1.34
KRT39-202ENST00000578029 MTERF2Q49AM1 385 aa6.67□□□□□ -1.34
KRT39-202ENST00000578029 KANK3Q6NY19 840 aa6.67□□□□□ -1.34
KRT39-202ENST00000578029 CACTIN-AS1Q8N1I8 211 aa6.67□□□□□ -1.34
KRT39-202ENST00000578029 GAL3ST3Q96A11 431 aa6.67□□□□□ -1.34
KRT39-202ENST00000578029 KANSL2Q9H9L4 492 aa6.67□□□□□ -1.34
KRT39-202ENST00000578029 ST8SIA5O15466 376 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 MARCH6O60337 910 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 DDAH1O94760 285 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 GJB6O95452 261 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 IKBKEQ14164 716 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 MLECQ14165 292 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 C2orf27AQ580R0 203 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 C16orf86Q6ZW13 317 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 KIAA0907Q7Z7F0 614 aaPredicted RBP6.66□□□□□ -1.34
KRT39-202ENST00000578029 THAP3Q8WTV1 239 aaPredicted RBP6.66□□□□□ -1.34
KRT39-202ENST00000578029 TNFRSF25Q93038 417 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 SMG9Q9H0W8 520 aaKnown RBP6.66□□□□□ -1.34
KRT39-202ENST00000578029 CWC22Q9HCG8 908 aaKnown RBP6.66□□□□□ -1.34
KRT39-202ENST00000578029 AVENQ9NQS1 362 aaPredicted RBP6.66□□□□□ -1.34
KRT39-202ENST00000578029 DACH1Q9UI36 760 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 SLC6A14Q9UN76 642 aa6.66□□□□□ -1.34
KRT39-202ENST00000578029 POLR3KQ9Y2Y1 108 aaPredicted RBP6.66□□□□□ -1.34
KRT39-202ENST00000578029 GSTP1P09211 210 aaKnown RBP6.65□□□□□ -1.34
KRT39-202ENST00000578029 BMP4P12644 408 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 CDC27P30260 824 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 GYS2P54840 703 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 PTPN11Q06124 597 aaPredicted RBP6.65□□□□□ -1.34
KRT39-202ENST00000578029 PERM1Q5SV97 790 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 MAP1SQ66K74 1059 aaPredicted RBP6.65□□□□□ -1.34
KRT39-202ENST00000578029 ADAMTSL4Q6UY14 1074 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 PDZD3Q86UT5 571 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 KIFC2Q96AC6 838 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 ZNF669Q96BR6 464 aaPredicted RBP6.65□□□□□ -1.34
KRT39-202ENST00000578029 FEZ1Q99689 392 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 TM9SF2Q99805 663 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 LACRTQ9GZZ8 138 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 FRRS1LQ9P0K9 344 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 SLC12A7Q9Y666 1083 aa6.65□□□□□ -1.34
KRT39-202ENST00000578029 A0A1W2PQH9 124 aa6.64□□□□□ -1.35
KRT39-202ENST00000578029 GRIN3BO60391 1043 aa6.64□□□□□ -1.35
KRT39-202ENST00000578029 HNRNPUQ00839 825 aaKnown RBP eCLIP6.64□□□□□ -1.35
KRT39-202ENST00000578029 SQSTM1Q13501 440 aa6.64□□□□□ -1.35
KRT39-202ENST00000578029 FAM178BQ8IXR5 827 aa6.64□□□□□ -1.35
KRT39-202ENST00000578029 SYNPOQ8N3V7 929 aa6.64□□□□□ -1.35
KRT39-202ENST00000578029 ZSCAN1Q8NBB4 408 aa6.64□□□□□ -1.35
KRT39-202ENST00000578029 ST13P5Q8NFI4 369 aaPredicted RBP6.64□□□□□ -1.35
KRT39-202ENST00000578029 SOX17Q9H6I2 414 aaPredicted RBP6.64□□□□□ -1.35
KRT39-202ENST00000578029 SENP2Q9HC62 589 aa6.64□□□□□ -1.35
KRT39-202ENST00000578029 SH2B1Q9NRF2 756 aaPredicted RBP6.64□□□□□ -1.35
KRT39-202ENST00000578029 TRIM33Q9UPN9 1127 aa6.64□□□□□ -1.35
KRT39-202ENST00000578029 LEMD3Q9Y2U8 911 aa6.64□□□□□ -1.35
KRT39-202ENST00000578029 KDM2BQ8NHM5 1336 aa6.64□□□□□ -1.35
KRT39-202ENST00000578029 MEIS3P2A8K0S8 358 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 SOX1O00570 391 aaPredicted RBP6.63□□□□□ -1.35
KRT39-202ENST00000578029 GUCY2CP25092 1073 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 ADH7P40394 386 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 TCEA2Q15560 299 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 RUFY4Q6ZNE9 571 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 TTC6Q86TZ1 520 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 JMYQ8N9B5 988 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 TTC9Q92623 222 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 ACSBG1Q96GR2 724 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 LPIN3Q9BQK8 851 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 PRR36Q9H6K5 1346 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 SNCAIPQ9Y6H5 919 aa6.63□□□□□ -1.35
KRT39-202ENST00000578029 CDC14CA4D256 554 aa6.62□□□□□ -1.35
KRT39-202ENST00000578029 ADARB2-AS1A8MUL3 147 aa6.62□□□□□ -1.35
KRT39-202ENST00000578029 H3BRJ5 948 aa6.62□□□□□ -1.35
KRT39-202ENST00000578029 GPR25O00155 361 aa6.62□□□□□ -1.35
KRT39-202ENST00000578029 HTR3BO95264 441 aa6.62□□□□□ -1.35
KRT39-202ENST00000578029 CYP11A1P05108 521 aa6.62□□□□□ -1.35
KRT39-202ENST00000578029 ARL4DP49703 201 aa6.62□□□□□ -1.35
KRT39-202ENST00000578029 PCBP4P57723 403 aaKnown RBP6.62□□□□□ -1.35
KRT39-202ENST00000578029 SSRP1Q08945 709 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms