RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 TCERG1LQ5VWI1 586 aa4.95□□□□□ -1.62
CDH8-205ENST00000577730 IQCDQ96DY2 449 aa4.95□□□□□ -1.62
CDH8-205ENST00000577730 TRPC3Q13507 836 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 MLECQ14165 292 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 FAM133BQ5BKY9 247 aaKnown RBP4.94□□□□□ -1.62
CDH8-205ENST00000577730 MAP3K21Q5TCX8 1036 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 RNF217Q8TC41 542 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 HOOK2Q96ED9 719 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 KIF1BPQ96EK5 621 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 THOC1Q96FV9 657 aaKnown RBP4.94□□□□□ -1.62
CDH8-205ENST00000577730 SUN1O94901 812 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 HMOX1P09601 288 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 PACS2Q86VP3 889 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 MAP7D3Q8IWC1 876 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 ARHGAP45Q92619 1136 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 RRP36Q96EU6 259 aaKnown RBP4.94□□□□□ -1.62
CDH8-205ENST00000577730 AP1G2O75843 785 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 POLR3DP05423 398 aaPredicted RBP4.94□□□□□ -1.62
CDH8-205ENST00000577730 KRT13P13646 458 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 KCTD16Q68DU8 428 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 XAB2Q9HCS7 855 aaKnown RBP4.94□□□□□ -1.62
CDH8-205ENST00000577730 TPCN1Q9ULQ1 816 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 STX10O60499 249 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 FERP16591 822 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 MTX1Q13505 466 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 SWT1Q5T5J6 900 aaKnown RBP4.94□□□□□ -1.62
CDH8-205ENST00000577730 ARHGAP22Q7Z5H3 698 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 MYLK4Q86YV6 388 aaPredicted RBP4.94□□□□□ -1.62
CDH8-205ENST00000577730 ZNF653Q96CK0 615 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 TPD52P55327 224 aaPredicted RBP4.94□□□□□ -1.62
CDH8-205ENST00000577730 SCRN1Q12765 414 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 SPDYE1Q8NFV5 336 aaPredicted RBP4.94□□□□□ -1.62
CDH8-205ENST00000577730 LZICQ8WZA0 190 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 NEK1Q96PY6 1258 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 ABCF2Q9UG63 623 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 PDE1AP54750 535 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 UBXN1Q04323 297 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 ALS2CLQ60I27 953 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 FAM43BQ6ZT52 329 aaPredicted RBP4.94□□□□□ -1.62
CDH8-205ENST00000577730 TXLNGQ9NUQ3 528 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 ITGB1BP2Q9UKP3 347 aa4.94□□□□□ -1.62
CDH8-205ENST00000577730 ACTN4O43707 911 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 LMNAP02545 664 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 STX2P32856 288 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 TMED10P49755 219 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 WDR75Q8IWA0 830 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 LEO1Q8WVC0 666 aaPredicted RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 NUF2Q9BZD4 464 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 PALMDQ9NP74 551 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 MYO1AQ9UBC5 1043 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 NUB1Q9Y5A7 615 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 NR1D1P20393 614 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 PAPOLAP51003 745 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 CFAP221Q4G0U5 840 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 KIAA0825Q8IV33 1275 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 HVCN1Q96D96 273 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 CCDC43Q96MW1 224 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 DRC3Q9H069 523 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 CNOT10Q9H9A5 744 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 ATP2A1O14983 1001 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 ZNF189O75820 626 aaPredicted RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 AIDAQ96BJ3 306 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 MIEF2Q96C03 454 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 PLVAPQ9BX97 442 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 RHBDL2Q9NX52 303 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 UBAP1Q9NZ09 502 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 RGS16O15492 202 aaPredicted RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 ST5P78524 1137 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 MRPS35P82673 323 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 ADCY2Q08462 1091 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 PDCLQ13371 301 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 ANKRD20A3Q5VUR7 823 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 APBB1IPQ7Z5R6 666 aaPredicted RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 THUMPD2Q9BTF0 503 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.93□□□□□ -1.62
CDH8-205ENST00000577730 HAUS4Q9H6D7 363 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 HELLSQ9NRZ9 838 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 BCAP29Q9UHQ4 241 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 AKAP2Q9Y2D5 859 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 ZNF330Q9Y3S2 320 aaPredicted RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 CFAP73A6NFT4 308 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 AMPHP49418 695 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 MMP14P50281 582 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 SF3A3Q12874 501 aaKnown RBP eCLIP4.93□□□□□ -1.62
CDH8-205ENST00000577730 PKP1Q13835 747 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 MFN1Q8IWA4 741 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 CFAP61Q8NHU2 1237 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 STAMBPL1Q96FJ0 436 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 GGNBP2Q9H3C7 697 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 SYNCQ9H7C4 482 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 GUCY2FP51841 1108 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 CCT2P78371 535 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 SFSWAPQ12872 951 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 SREK1Q8WXA9 508 aaKnown RBP4.93□□□□□ -1.62
CDH8-205ENST00000577730 DESI2Q9BSY9 194 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 DNAI2Q9GZS0 605 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 CD248Q9HCU0 757 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 ANGPTL2Q9UKU9 493 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 TBC1D2BQ9UPU7 963 aa4.93□□□□□ -1.62
CDH8-205ENST00000577730 CUX1P39880 1505 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms