RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 IMPACTQ9P2X3 320 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 NFE2L3Q9Y4A8 694 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 ITGA6P23229 1130 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 CCT6AP40227 531 aaKnown RBP12.36□□□□□ -0.43
RNF43-203ENST00000577716 IGSF22Q8N9C0 903 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 XPO4Q9C0E2 1151 aaKnown RBP12.36□□□□□ -0.43
RNF43-203ENST00000577716 CUTAO60888 179 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 NAPAP54920 295 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 NLRP12P59046 1061 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 ZNF174Q15697 407 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 MYSM1Q5VVJ2 828 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 DSCC1Q9BVC3 393 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 PRR36Q9H6K5 1346 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 HECW2Q9P2P5 1572 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 MAP4K1Q92918 833 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 CAPZA3Q96KX2 299 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 NLRP3Q96P20 1036 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 LRRC27Q9C0I9 530 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 RSPH14Q9UHP6 348 aa12.36□□□□□ -0.43
RNF43-203ENST00000577716 IBSPP21815 317 aaPredicted RBP12.35□□□□□ -0.43
RNF43-203ENST00000577716 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 ARAP3Q8WWN8 1544 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 CFAP74Q9C0B2 1584 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 DEXIO95424 95 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 ZAP70P43403 619 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 ADALQ6DHV7 355 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 PLIN2Q99541 437 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 MCM9Q9NXL9 1143 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 KIAA1468Q9P260 1216 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 DTHD1Q6ZMT9 781 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.35□□□□□ -0.43
RNF43-203ENST00000577716 VPS18Q9P253 973 aa12.35□□□□□ -0.43
RNF43-203ENST00000577716 ARHGAP6O43182 974 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 TUBB4BP68371 445 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 MICALCLQ6ZW33 695 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 MLKLQ8NB16 471 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 CUL5Q93034 780 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 VPS16Q9H269 839 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 NSFL1CQ9UNZ2 370 aaKnown RBP12.34□□□□□ -0.43
RNF43-203ENST00000577716 MADDQ8WXG6 1647 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 HSF2BPO75031 334 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 PLCD4Q9BRC7 762 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 GSTTP1A0A1W2PQM5 241 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 ANKRD62A6NC57 917 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 CETN2P41208 172 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 TRMT1LQ7Z2T5 733 aaKnown RBP12.34□□□□□ -0.43
RNF43-203ENST00000577716 PYCARDQ9ULZ3 195 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 RNF17Q9BXT8 1623 aaKnown RBP12.34□□□□□ -0.43
RNF43-203ENST00000577716 IVLP07476 585 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 PCDH11XQ9BZA7 1347 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 PCDH11YQ9BZA8 1340 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 ROBO2Q9HCK4 1378 aa12.34□□□□□ -0.43
RNF43-203ENST00000577716 TUBBP07437 444 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 MAP2K1Q02750 393 aaPredicted RBP12.33□□□□□ -0.44
RNF43-203ENST00000577716 ZNF274Q96GC6 653 aaPredicted RBP12.33□□□□□ -0.44
RNF43-203ENST00000577716 MAPK8IP1Q9UQF2 711 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 V9GY48 417 aaPredicted RBP12.33□□□□□ -0.44
RNF43-203ENST00000577716 SPHKAPQ2M3C7 1700 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 KDRP35968 1356 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 MACROD2A1Z1Q3 448 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 TAF5LO75529 589 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 PRDM1O75626 825 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 ARID5AQ03989 594 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 CETN1Q12798 172 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 TNIP1Q15025 636 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 CCDC122Q5T0U0 273 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 PFKFB2O60825 505 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 PROSER3Q2NL68 480 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 WWC2Q6AWC2 1192 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 E9PCH4 1651 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 PTCH1Q13635 1447 aa12.33□□□□□ -0.44
RNF43-203ENST00000577716 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 IGSF1Q8N6C5 1336 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 HSPD1P10809 573 aaKnown RBP12.32□□□□□ -0.44
RNF43-203ENST00000577716 GSTO1P78417 241 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
RNF43-203ENST00000577716 SETDB2Q96T68 719 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 ZNF215Q9UL58 517 aaPredicted RBP12.32□□□□□ -0.44
RNF43-203ENST00000577716 SH3TC1Q8TE82 1336 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 BICDL2A1A5D9 508 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 TRMT44Q8IYL2 757 aaKnown RBP12.32□□□□□ -0.44
RNF43-203ENST00000577716 KCNJ14Q9UNX9 436 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 ATP7BP35670 1465 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 WDHD1O75717 1129 aaPredicted RBP12.32□□□□□ -0.44
RNF43-203ENST00000577716 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 PFKFB1P16118 471 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 MTX1Q13505 466 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 KRT79Q5XKE5 535 aa12.32□□□□□ -0.44
RNF43-203ENST00000577716 CTNNBL1Q8WYA6 563 aaPredicted RBP12.32□□□□□ -0.44
RNF43-203ENST00000577716 TLR7Q9NYK1 1049 aaKnown RBP12.32□□□□□ -0.44
RNF43-203ENST00000577716 ADD1P35611 737 aaKnown RBP12.31□□□□□ -0.44
RNF43-203ENST00000577716 IFI16Q16666 785 aaKnown RBP12.31□□□□□ -0.44
RNF43-203ENST00000577716 MRFAP1L1Q96HT8 127 aa12.31□□□□□ -0.44
RNF43-203ENST00000577716 HAUS7Q99871 368 aa12.31□□□□□ -0.44
RNF43-203ENST00000577716 DBNLQ9UJU6 430 aaKnown RBP12.31□□□□□ -0.44
RNF43-203ENST00000577716 FBXO3Q9UK99 471 aa12.31□□□□□ -0.44
RNF43-203ENST00000577716 JAG2Q9Y219 1238 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms