RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 XRCC5P13010 732 aaKnown RBP9.27□□□□□ -0.93
SMCHD1-202ENST00000577300 ASPAP45381 313 aa9.27□□□□□ -0.93
SMCHD1-202ENST00000577300 DSC3Q14574 896 aa9.27□□□□□ -0.93
SMCHD1-202ENST00000577300 DTHD1Q6ZMT9 781 aa9.27□□□□□ -0.93
SMCHD1-202ENST00000577300 NLRP2Q9NX02 1062 aa9.27□□□□□ -0.93
SMCHD1-202ENST00000577300 PPP4R2Q9NY27 417 aa9.27□□□□□ -0.93
SMCHD1-202ENST00000577300 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.93
SMCHD1-202ENST00000577300 SEZ6L2Q6UXD5 910 aa9.26□□□□□ -0.93
SMCHD1-202ENST00000577300 KRT82Q9NSB4 513 aa9.26□□□□□ -0.93
SMCHD1-202ENST00000577300 PPP1R9AQ9ULJ8 1098 aa9.26□□□□□ -0.93
SMCHD1-202ENST00000577300 FAM170BA6NMN3 283 aa9.25□□□□□ -0.93
SMCHD1-202ENST00000577300 CYP26A1O43174 497 aa9.25□□□□□ -0.93
SMCHD1-202ENST00000577300 PRNPP04156 253 aa9.25□□□□□ -0.93
SMCHD1-202ENST00000577300 ZNF157P51786 506 aaPredicted RBP9.25□□□□□ -0.93
SMCHD1-202ENST00000577300 FCGRTP55899 365 aa9.25□□□□□ -0.93
SMCHD1-202ENST00000577300 CYP27A1Q02318 531 aa9.25□□□□□ -0.93
SMCHD1-202ENST00000577300 PI16Q6UXB8 463 aa9.25□□□□□ -0.93
SMCHD1-202ENST00000577300 BCO2Q9BYV7 579 aa9.25□□□□□ -0.93
SMCHD1-202ENST00000577300 CCDC86Q9H6F5 360 aaKnown RBP9.25□□□□□ -0.93
SMCHD1-202ENST00000577300 TMPRSS2O15393 492 aa9.24□□□□□ -0.93
SMCHD1-202ENST00000577300 TREHO43280 583 aa9.24□□□□□ -0.93
SMCHD1-202ENST00000577300 HNRNPUQ00839 825 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMCHD1-202ENST00000577300 DUSP27Q5VZP5 1158 aa9.24□□□□□ -0.93
SMCHD1-202ENST00000577300 C1GALT1Q9NS00 363 aa9.24□□□□□ -0.93
SMCHD1-202ENST00000577300 TMEM39AQ9NV64 488 aa9.24□□□□□ -0.93
SMCHD1-202ENST00000577300 CRIM1Q9NZV1 1036 aa9.24□□□□□ -0.93
SMCHD1-202ENST00000577300 GSTP1P09211 210 aaKnown RBP9.23□□□□□ -0.93
SMCHD1-202ENST00000577300 SLFN14P0C7P3 912 aa9.23□□□□□ -0.93
SMCHD1-202ENST00000577300 LIG1P18858 919 aa9.23□□□□□ -0.93
SMCHD1-202ENST00000577300 MAPK1P28482 360 aa9.23□□□□□ -0.93
SMCHD1-202ENST00000577300 PLCB3Q01970 1234 aa9.23□□□□□ -0.93
SMCHD1-202ENST00000577300 PPP2R3AQ06190 1150 aa9.23□□□□□ -0.93
SMCHD1-202ENST00000577300 ENOX2Q16206 610 aaKnown RBP9.23□□□□□ -0.93
SMCHD1-202ENST00000577300 KIF4BQ2VIQ3 1234 aa9.23□□□□□ -0.93
SMCHD1-202ENST00000577300 WDR89Q96FK6 387 aaPredicted RBP9.23□□□□□ -0.93
SMCHD1-202ENST00000577300 CCDC39Q9UFE4 941 aa9.23□□□□□ -0.93
SMCHD1-202ENST00000577300 PNMA6FA0A0J9YX94 578 aa9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 ZNF862O60290 1169 aa9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 TAL1P17542 331 aaPredicted RBP9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 PDZD3Q86UT5 571 aa9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 VSIG10LQ86VR7 867 aa9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 KRTAP4-12Q9BQ66 201 aa9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 ATXN3LQ9H3M9 355 aa9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 GPN3Q9UHW5 284 aaPredicted RBP9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 ANGEL1Q9UNK9 670 aaKnown RBP9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 DAGLAQ9Y4D2 1042 aa9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 PCDHGC5Q9Y5F6 944 aa9.22□□□□□ -0.93
SMCHD1-202ENST00000577300 PAX4O43316 350 aa9.21□□□□□ -0.94
SMCHD1-202ENST00000577300 ID3Q02535 119 aa9.21□□□□□ -0.94
SMCHD1-202ENST00000577300 ZNF765Q7L2R6 523 aa9.21□□□□□ -0.94
SMCHD1-202ENST00000577300 FANCD2OSQ96PS1 177 aa9.21□□□□□ -0.94
SMCHD1-202ENST00000577300 ZC3H12CQ9C0D7 883 aaKnown RBP9.21□□□□□ -0.94
SMCHD1-202ENST00000577300 BSDC1Q9NW68 430 aaPredicted RBP9.21□□□□□ -0.94
SMCHD1-202ENST00000577300 ADGRE2Q9UHX3 823 aa9.21□□□□□ -0.94
SMCHD1-202ENST00000577300 DYNC1LI2O43237 492 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-202ENST00000577300 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMCHD1-202ENST00000577300 OGFOD3Q6PK18 319 aa9.2□□□□□ -0.94
SMCHD1-202ENST00000577300 NXPE4Q6UWF7 544 aa9.19□□□□□ -0.94
SMCHD1-202ENST00000577300 NFXL1Q6ZNB6 911 aa9.19□□□□□ -0.94
SMCHD1-202ENST00000577300 FBF1Q8TES7 1133 aa9.19□□□□□ -0.94
SMCHD1-202ENST00000577300 FBXL18Q96ME1 805 aa9.19□□□□□ -0.94
SMCHD1-202ENST00000577300 FMNL2Q96PY5 1086 aa9.19□□□□□ -0.94
SMCHD1-202ENST00000577300 SULF2Q8IWU5 870 aa9.18□□□□□ -0.94
SMCHD1-202ENST00000577300 PIDD1Q9HB75 910 aa9.18□□□□□ -0.94
SMCHD1-202ENST00000577300 DISC1Q9NRI5 854 aa9.18□□□□□ -0.94
SMCHD1-202ENST00000577300 ZC3H7BQ9UGR2 993 aaKnown RBP9.18□□□□□ -0.94
SMCHD1-202ENST00000577300 AKAP2Q9Y2D5 859 aa9.18□□□□□ -0.94
SMCHD1-202ENST00000577300 NME2P22392 152 aa9.17□□□□□ -0.94
SMCHD1-202ENST00000577300 ARNTP27540 789 aa9.17□□□□□ -0.94
SMCHD1-202ENST00000577300 ABI1Q8IZP0 508 aa9.17□□□□□ -0.94
SMCHD1-202ENST00000577300 C3orf58Q8NDZ4 430 aa9.17□□□□□ -0.94
SMCHD1-202ENST00000577300 KCNB2Q92953 911 aa9.17□□□□□ -0.94
SMCHD1-202ENST00000577300 SRCIN1Q9C0H9 1055 aa9.17□□□□□ -0.94
SMCHD1-202ENST00000577300 FMR1Q06787 632 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMCHD1-202ENST00000577300 CYP27C1Q4G0S4 372 aa9.16□□□□□ -0.94
SMCHD1-202ENST00000577300 ZSCAN29Q8IWY8 852 aaPredicted RBP9.16□□□□□ -0.94
SMCHD1-202ENST00000577300 SMYD4Q8IYR2 804 aaPredicted RBP9.16□□□□□ -0.94
SMCHD1-202ENST00000577300 STK35Q8TDR2 534 aa9.16□□□□□ -0.94
SMCHD1-202ENST00000577300 EMILIN2Q9BXX0 1053 aa9.16□□□□□ -0.94
SMCHD1-202ENST00000577300 LGR6Q9HBX8 967 aa9.16□□□□□ -0.94
SMCHD1-202ENST00000577300 LRRC4CQ9HCJ2 640 aa9.16□□□□□ -0.94
SMCHD1-202ENST00000577300 KCNA1Q09470 495 aa9.15□□□□□ -0.94
SMCHD1-202ENST00000577300 ASB16Q96NS5 453 aa9.15□□□□□ -0.94
SMCHD1-202ENST00000577300 NECAB3Q96P71 396 aaPredicted RBP9.15□□□□□ -0.94
SMCHD1-202ENST00000577300 IVNS1ABPQ9Y6Y0 642 aa9.15□□□□□ -0.94
SMCHD1-202ENST00000577300 GSTT1P30711 240 aa9.14□□□□□ -0.95
SMCHD1-202ENST00000577300 TXKP42681 527 aa9.14□□□□□ -0.95
SMCHD1-202ENST00000577300 ZNF252P-AS1Q0IIN9 211 aa9.14□□□□□ -0.95
SMCHD1-202ENST00000577300 TTLL4Q14679 1199 aa9.14□□□□□ -0.95
SMCHD1-202ENST00000577300 CACNA2D2Q9NY47 1150 aa9.14□□□□□ -0.95
SMCHD1-202ENST00000577300 GIPC1O14908 333 aa9.13□□□□□ -0.95
SMCHD1-202ENST00000577300 MAPK8P45983 427 aa9.13□□□□□ -0.95
SMCHD1-202ENST00000577300 ZC3H12AQ5D1E8 599 aaKnown RBP9.13□□□□□ -0.95
SMCHD1-202ENST00000577300 ALG1LQ6GMV1 187 aa9.13□□□□□ -0.95
SMCHD1-202ENST00000577300 CBLL1Q75N03 491 aa9.13□□□□□ -0.95
SMCHD1-202ENST00000577300 TP53INP2Q8IXH6 220 aa9.13□□□□□ -0.95
SMCHD1-202ENST00000577300 ANKRD24Q8TF21 1146 aa9.13□□□□□ -0.95
SMCHD1-202ENST00000577300 GOLGA2P5Q9HBQ8 144 aa9.13□□□□□ -0.95
SMCHD1-202ENST00000577300 PCOLCE2Q9UKZ9 415 aa9.13□□□□□ -0.95
SMCHD1-202ENST00000577300 PPM1HQ9ULR3 514 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms