RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	TMED8	Q6PL24	325 aa	Predicted RBP	11.99	□□□□□ -0.49
SPOP-222	ENST00000577134	CWC27	Q6UX04	472 aa	Known RBP	11.99	□□□□□ -0.49
SPOP-222	ENST00000577134	TICAM2	Q86XR7	235 aa		11.99	□□□□□ -0.49
SPOP-222	ENST00000577134	MTMR14	Q8NCE2	650 aa		11.99	□□□□□ -0.49
SPOP-222	ENST00000577134	APPBP2	Q92624	585 aa		11.99	□□□□□ -0.49
SPOP-222	ENST00000577134	ZBED3	Q96IU2	234 aa	Predicted RBP	11.99	□□□□□ -0.49
SPOP-222	ENST00000577134	NOL10	Q9BSC4	688 aa	Known RBP	11.99	□□□□□ -0.49
SPOP-222	ENST00000577134	NMRK2	Q9NPI5	230 aa		11.99	□□□□□ -0.49
SPOP-222	ENST00000577134	DIAPH3	Q9NSV4	1193 aa		11.99	□□□□□ -0.49
SPOP-222	ENST00000577134	ECM29	Q5VYK3	1845 aa		11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	WNT10B	O00744	389 aa		11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	CDC45	O75419	566 aa		11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	MBD4	O95243	580 aa		11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	BAG3	O95817	575 aa		11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	MCMDC2	Q4G0Z9	681 aa		11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	LCORL	Q8N3X6	602 aa		11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	TDRD3	Q9H7E2	651 aa	Known RBP	11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	ARMT1	Q9H993	441 aa		11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	HELLS	Q9NRZ9	838 aa		11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	USP40	Q9NVE5	1235 aa		11.98	□□□□□ -0.49
SPOP-222	ENST00000577134	ASTN2	O75129	1339 aa	Predicted RBP	11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	CLRN2	A0PK11	232 aa		11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	VEGFA	P15692	232 aa	Predicted RBP	11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	YY1	P25490	414 aa		11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	PPP4C	P60510	307 aa		11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	CDC42EP5	Q6NZY7	148 aa		11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	CCDC129	Q6ZRS4	1044 aa		11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	USP50	Q70EL3	339 aa	Predicted RBP	11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	AIDA	Q96BJ3	306 aa		11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	RIOK1	Q9BRS2	568 aa	Known RBP	11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	IL25	Q9H293	177 aa		11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	ZNF70	Q9UC06	446 aa	Predicted RBP	11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	CDK5RAP2	Q96SN8	1893 aa		11.97	□□□□□ -0.49
SPOP-222	ENST00000577134	UTRN	P46939	3433 aa		11.96	□□□□□ -0.49
SPOP-222	ENST00000577134	MYO1B	O43795	1136 aa		11.96	□□□□□ -0.49
SPOP-222	ENST00000577134	CACNB3	P54284	484 aa		11.96	□□□□□ -0.49
SPOP-222	ENST00000577134	RHBDL3	P58872	404 aa		11.96	□□□□□ -0.49
SPOP-222	ENST00000577134	SPDYE2	Q495Y8	402 aa		11.96	□□□□□ -0.49
SPOP-222	ENST00000577134	EAPP	Q56P03	285 aa	Predicted RBP	11.96	□□□□□ -0.49
SPOP-222	ENST00000577134	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.96	□□□□□ -0.49
SPOP-222	ENST00000577134	STRBP	Q96SI9	672 aa	Known RBP	11.96	□□□□□ -0.49
SPOP-222	ENST00000577134	SCAF8	Q9UPN6	1271 aa	Known RBP	11.96	□□□□□ -0.49
SPOP-222	ENST00000577134	GPAA1	O43292	621 aa		11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	PRKAB2	O43741	272 aa		11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	POTEI	P0CG38	1075 aa		11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	POTEJ	P0CG39	1038 aa		11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	PLCG2	P16885	1265 aa		11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	ANGEL2	Q5VTE6	544 aa	Known RBP	11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	CASC1	Q6TDU7	716 aa		11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	PNMA8A	Q86V59	439 aa	Predicted RBP	11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	TEX11	Q8IYF3	940 aa		11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	RUFY2	Q8WXA3	655 aa		11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	VEZT	Q9HBM0	779 aa		11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	SLC4A4	Q9Y6R1	1079 aa		11.95	□□□□□ -0.5
SPOP-222	ENST00000577134	POLR2A	P24928	1970 aa	Known RBP	11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	CCDC171	Q6TFL3	1326 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	TCP10L2	B9ZVM9	353 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	SGSM2	O43147	1006 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	WDHD1	O75717	1129 aa	Predicted RBP	11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	USP5	P45974	858 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	NFIA	Q12857	509 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	PICALM	Q13492	652 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	TGFBRAP1	Q8WUH2	860 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	SDR42E1	Q8WUS8	393 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	ESYT1	Q9BSJ8	1104 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	DDX4	Q9NQI0	724 aa	Known RBP	11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	GGA3	Q9NZ52	723 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	TMOD2	Q9NZR1	351 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	CLEC11A	Q9Y240	323 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	FOCAD	Q5VW36	1801 aa		11.94	□□□□□ -0.5
SPOP-222	ENST00000577134	RAD50	Q92878	1312 aa		11.93	□□□□□ -0.5
SPOP-222	ENST00000577134	TCP10	Q12799	353 aa		11.93	□□□□□ -0.5
SPOP-222	ENST00000577134	VPS53	Q5VIR6	699 aa		11.93	□□□□□ -0.5
SPOP-222	ENST00000577134	CERS3	Q8IU89	383 aa		11.93	□□□□□ -0.5
SPOP-222	ENST00000577134	MAPKAPK5	Q8IW41	473 aa		11.93	□□□□□ -0.5
SPOP-222	ENST00000577134	ZFPM1	Q8IX07	1006 aa		11.93	□□□□□ -0.5
SPOP-222	ENST00000577134	IDI2	Q9BXS1	227 aa		11.93	□□□□□ -0.5
SPOP-222	ENST00000577134	FAM198A	Q9UFP1	575 aa		11.93	□□□□□ -0.5
SPOP-222	ENST00000577134	GSG1L2	A8MUP6	293 aa		11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	PATL2	C9JE40	543 aa	Known RBP	11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	APP	P05067	770 aa		11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	GNAT2	P19087	354 aa		11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	MFAP1	P55081	439 aa	Known RBP	11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	ZC3H15	Q8WU90	426 aa	Known RBP	11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	DCPS	Q96C86	337 aa	Known RBP	11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	PGAP2	Q9UHJ9	254 aa		11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	MYH1	P12882	1939 aa		11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	CNTNAP1	P78357	1384 aa		11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.92	□□□□□ -0.5
SPOP-222	ENST00000577134	NAV1	Q8NEY1	1877 aa		11.91	□□□□□ -0.5
SPOP-222	ENST00000577134	FLT1	P17948	1338 aa		11.91	□□□□□ -0.5
SPOP-222	ENST00000577134	KIF3C	O14782	793 aa		11.91	□□□□□ -0.5
SPOP-222	ENST00000577134	FOXP2	O15409	715 aa		11.91	□□□□□ -0.5
SPOP-222	ENST00000577134	HSPD1	P10809	573 aa	Known RBP	11.91	□□□□□ -0.5
SPOP-222	ENST00000577134	PTH1R	Q03431	593 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms