RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 A0A1W2PQD8 194 aa16.66■□□□□ 0.26
SCARF1-209ENST00000576012 M0R2C6 588 aa16.66■□□□□ 0.26
SCARF1-209ENST00000576012 ZMYND10O75800 440 aa16.66■□□□□ 0.26
SCARF1-209ENST00000576012 HMGB1P09429 215 aaKnown RBP16.66■□□□□ 0.26
SCARF1-209ENST00000576012 FMR1Q06787 632 aaKnown RBP eCLIP16.66■□□□□ 0.26
SCARF1-209ENST00000576012 GOLGA5Q8TBA6 731 aa16.66■□□□□ 0.26
SCARF1-209ENST00000576012 CDC5LQ99459 802 aaKnown RBP16.66■□□□□ 0.26
SCARF1-209ENST00000576012 APPP05067 770 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 TXLNAP40222 546 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 PPARDQ03181 441 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 ANKLE2Q86XL3 938 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 KCND1Q9NSA2 647 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 ARHGAP23Q9P227 1491 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
SCARF1-209ENST00000576012 ALG1Q9BT22 464 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 TEX33O43247 280 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 BMP6P22004 513 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
SCARF1-209ENST00000576012 GRIN1Q05586 938 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 SLC20A2Q08357 652 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 RALYLQ86SE5 291 aaKnown RBP16.65■□□□□ 0.26
SCARF1-209ENST00000576012 TBX22Q9Y458 520 aa16.65■□□□□ 0.26
SCARF1-209ENST00000576012 PTPRUQ92729 1446 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 IFIT1P09914 478 aaKnown RBP16.64■□□□□ 0.25
SCARF1-209ENST00000576012 HSP90B2PQ58FF3 399 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 FKBP15Q5T1M5 1219 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 PI16Q6UXB8 463 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 METTL16Q86W50 562 aaKnown RBP16.64■□□□□ 0.25
SCARF1-209ENST00000576012 TMEM139Q8IV31 216 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 RIN2Q8WYP3 895 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-209ENST00000576012 INCENPQ9NQS7 918 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 PRR29P0C7W0 189 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 CMA1P23946 247 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 VPS37DQ86XT2 251 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 TC2NQ8N9U0 490 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 HAUS7Q99871 368 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 PXDNLA1KZ92 1463 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 MAST3O60307 1309 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 TECPR2O15040 1411 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 KIF23Q02241 960 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-209ENST00000576012 PLEKHO1Q53GL0 409 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-209ENST00000576012 MUM1L1Q5H9M0 696 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 RABGGTAQ92696 567 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 OSBP2Q969R2 916 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 KCNG1Q9UIX4 513 aa16.64■□□□□ 0.25
SCARF1-209ENST00000576012 RSRC2Q7L4I2 434 aaKnown RBP16.63■□□□□ 0.25
SCARF1-209ENST00000576012 SMYD4Q8IYR2 804 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-209ENST00000576012 CMTR1Q8N1G2 835 aaKnown RBP16.63■□□□□ 0.25
SCARF1-209ENST00000576012 STAMQ92783 540 aa16.63■□□□□ 0.25
SCARF1-209ENST00000576012 POLR3EQ9NVU0 708 aa16.63■□□□□ 0.25
SCARF1-209ENST00000576012 ZC3H6P61129 1189 aaKnown RBP16.63■□□□□ 0.25
SCARF1-209ENST00000576012 CCDC102BQ68D86 513 aa16.63■□□□□ 0.25
SCARF1-209ENST00000576012 PACS2Q86VP3 889 aa16.63■□□□□ 0.25
SCARF1-209ENST00000576012 ACRBPQ8NEB7 543 aa16.63■□□□□ 0.25
SCARF1-209ENST00000576012 NKX2-3Q8TAU0 364 aa16.63■□□□□ 0.25
SCARF1-209ENST00000576012 KIFC2Q96AC6 838 aa16.63■□□□□ 0.25
SCARF1-209ENST00000576012 SENP2Q9HC62 589 aa16.63■□□□□ 0.25
SCARF1-209ENST00000576012 LOC102724159A0A0B4J2E5 919 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 YEATS4O95619 227 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 AFMP43652 599 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 VSNL1P62760 191 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 PWP2Q15269 919 aaKnown RBP16.62■□□□□ 0.25
SCARF1-209ENST00000576012 LRRC24Q50LG9 513 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
SCARF1-209ENST00000576012 EXOC4Q96A65 974 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 KCNH3Q9ULD8 1083 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 ADAMTSL3P82987 1691 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 POLR2DO15514 142 aaKnown RBP16.62■□□□□ 0.25
SCARF1-209ENST00000576012 SPECC1LQ69YQ0 1117 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 SIRT1Q96EB6 747 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 ANKZF1Q9H8Y5 726 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 FAM208AQ9UK61 1670 aaKnown RBP16.62■□□□□ 0.25
SCARF1-209ENST00000576012 IKBKBO14920 756 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 NFXL1Q6ZNB6 911 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 ZNF274Q96GC6 653 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-209ENST00000576012 BPIFA3Q9BQP9 254 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 DDX21Q9NR30 783 aaKnown RBP eCLIP16.62■□□□□ 0.25
SCARF1-209ENST00000576012 RAI14Q9P0K7 980 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 TFR2Q9UP52 801 aa16.62■□□□□ 0.25
SCARF1-209ENST00000576012 EIF3CLB5ME19 914 aaKnown RBP16.61■□□□□ 0.25
SCARF1-209ENST00000576012 AKAP4Q5JQC9 854 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 NCAPH2Q6IBW4 605 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 RAD9BQ6WBX8 426 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 GOLGA6L1Q8N7Z2 621 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 EIF3CQ99613 913 aaKnown RBP16.61■□□□□ 0.25
SCARF1-209ENST00000576012 UBXN6Q9BZV1 441 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 PES1O00541 588 aaKnown RBP16.61■□□□□ 0.25
SCARF1-209ENST00000576012 KIF5CO60282 957 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 IBSPP21815 317 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-209ENST00000576012 CDC25AP30304 524 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 SLC39A14Q15043 492 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 TTC31Q49AM3 519 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-209ENST00000576012 KRT40Q6A162 431 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 ATL3Q6DD88 541 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 TTC19Q6DKK2 380 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-209ENST00000576012 SLC35F6Q8N357 371 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 AKAP2Q9Y2D5 859 aa16.61■□□□□ 0.25
SCARF1-209ENST00000576012 ENC1O14682 589 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms