RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 FAM196AQ6ZSG2 479 aa9.43□□□□□ -0.9
TOM1L1-216ENST00000573607 RASGRP4Q8TDF6 673 aa9.43□□□□□ -0.9
TOM1L1-216ENST00000573607 GMLQ99445 158 aa9.43□□□□□ -0.9
TOM1L1-216ENST00000573607 CCDC86Q9H6F5 360 aaKnown RBP9.43□□□□□ -0.9
TOM1L1-216ENST00000573607 FAM221AA4D161 298 aa9.42□□□□□ -0.9
TOM1L1-216ENST00000573607 CDK8P49336 464 aa9.42□□□□□ -0.9
TOM1L1-216ENST00000573607 SF3A1Q15459 793 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-216ENST00000573607 LINC00114Q6XXX2 140 aa9.42□□□□□ -0.9
TOM1L1-216ENST00000573607 GPBAR1Q8TDU6 330 aa9.42□□□□□ -0.9
TOM1L1-216ENST00000573607 DHX38Q92620 1227 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-216ENST00000573607 USP26Q9BXU7 913 aa9.42□□□□□ -0.9
TOM1L1-216ENST00000573607 GINM1Q9NU53 330 aa9.42□□□□□ -0.9
TOM1L1-216ENST00000573607 EFR3BQ9Y2G0 817 aa9.42□□□□□ -0.9
TOM1L1-216ENST00000573607 DLGAP3O95886 979 aa9.41□□□□□ -0.9
TOM1L1-216ENST00000573607 CYP11A1P05108 521 aa9.41□□□□□ -0.9
TOM1L1-216ENST00000573607 SELPP16109 830 aa9.41□□□□□ -0.9
TOM1L1-216ENST00000573607 SUZ12Q15022 739 aaKnown RBP9.41□□□□□ -0.9
TOM1L1-216ENST00000573607 MCF2L2Q86YR7 1114 aa9.41□□□□□ -0.9
TOM1L1-216ENST00000573607 KLHL23Q8NBE8 558 aa9.41□□□□□ -0.9
TOM1L1-216ENST00000573607 GATAD2BQ8WXI9 593 aa9.41□□□□□ -0.9
TOM1L1-216ENST00000573607 WDR89Q96FK6 387 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-216ENST00000573607 CORO1BQ9BR76 489 aa9.41□□□□□ -0.9
TOM1L1-216ENST00000573607 A0A0A0MRY4 1105 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 FAM229AH3BQW9 127 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 ZNF862O60290 1169 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 FGRP09769 529 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 LIG1P18858 919 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 LORP23490 312 aaPredicted RBP9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 APOBRQ0VD83 1088 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 SEZ6Q53EL9 994 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 VPS37DQ86XT2 251 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 UBASH3BQ8TF42 649 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 NKD1Q969G9 470 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 ENAMQ9NRM1 1142 aa9.4□□□□□ -0.9
TOM1L1-216ENST00000573607 LOC100289279A0A1B0GTE1 492 aa9.39□□□□□ -0.91
TOM1L1-216ENST00000573607 CILPO75339 1184 aa9.39□□□□□ -0.91
TOM1L1-216ENST00000573607 TRIM37O94972 964 aa9.39□□□□□ -0.91
TOM1L1-216ENST00000573607 CD68P34810 354 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-216ENST00000573607 NASPP49321 788 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-216ENST00000573607 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.39□□□□□ -0.91
TOM1L1-216ENST00000573607 PLVAPQ9BX97 442 aa9.39□□□□□ -0.91
TOM1L1-216ENST00000573607 CACNA2D2Q9NY47 1150 aa9.39□□□□□ -0.91
TOM1L1-216ENST00000573607 WISP1O95388 367 aa9.38□□□□□ -0.91
TOM1L1-216ENST00000573607 ATP2B1P20020 1258 aa9.38□□□□□ -0.91
TOM1L1-216ENST00000573607 GTF2F1P35269 517 aaKnown RBP eCLIP9.38□□□□□ -0.91
TOM1L1-216ENST00000573607 PDE3AQ14432 1141 aa9.38□□□□□ -0.91
TOM1L1-216ENST00000573607 CCDC84Q86UT8 332 aaPredicted RBP9.38□□□□□ -0.91
TOM1L1-216ENST00000573607 FMR1NBQ8N0W7 255 aaPredicted RBP9.38□□□□□ -0.91
TOM1L1-216ENST00000573607 PCDHA4Q9UN74 947 aa9.38□□□□□ -0.91
TOM1L1-216ENST00000573607 INPP5AQ14642 412 aa9.37□□□□□ -0.91
TOM1L1-216ENST00000573607 FBXO11Q86XK2 927 aa9.37□□□□□ -0.91
TOM1L1-216ENST00000573607 MAP4K3Q8IVH8 894 aa9.37□□□□□ -0.91
TOM1L1-216ENST00000573607 SLITRK4Q8IW52 837 aa9.37□□□□□ -0.91
TOM1L1-216ENST00000573607 ACSBG1Q96GR2 724 aa9.37□□□□□ -0.91
TOM1L1-216ENST00000573607 LOC105371045A0A1W2PR82 267 aa9.36□□□□□ -0.91
TOM1L1-216ENST00000573607 DLL1O00548 723 aa9.36□□□□□ -0.91
TOM1L1-216ENST00000573607 MPP2Q14168 576 aa9.36□□□□□ -0.91
TOM1L1-216ENST00000573607 DTWD1Q8N5C7 304 aa9.36□□□□□ -0.91
TOM1L1-216ENST00000573607 SEC16BQ96JE7 1060 aa9.36□□□□□ -0.91
TOM1L1-216ENST00000573607 DNAJC2Q99543 621 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-216ENST00000573607 LRRC3Q9BY71 257 aa9.36□□□□□ -0.91
TOM1L1-216ENST00000573607 BRMS1Q9HCU9 246 aa9.36□□□□□ -0.91
TOM1L1-216ENST00000573607 WIPF1O43516 503 aa9.35□□□□□ -0.91
TOM1L1-216ENST00000573607 MCM4P33991 863 aa9.35□□□□□ -0.91
TOM1L1-216ENST00000573607 SOX9P48436 509 aa9.35□□□□□ -0.91
TOM1L1-216ENST00000573607 LRFN4Q6PJG9 635 aa9.35□□□□□ -0.91
TOM1L1-216ENST00000573607 CCDC81Q6ZN84 652 aa9.35□□□□□ -0.91
TOM1L1-216ENST00000573607 REC114Q7Z4M0 266 aa9.35□□□□□ -0.91
TOM1L1-216ENST00000573607 UBXN4Q92575 508 aa9.35□□□□□ -0.91
TOM1L1-216ENST00000573607 PPT2Q9UMR5 302 aa9.35□□□□□ -0.91
TOM1L1-216ENST00000573607 POLR3KQ9Y2Y1 108 aaPredicted RBP9.35□□□□□ -0.91
TOM1L1-216ENST00000573607 ROBO2Q9HCK4 1378 aa9.35□□□□□ -0.91
TOM1L1-216ENST00000573607 CNTNAP5Q8WYK1 1306 aa9.34□□□□□ -0.91
TOM1L1-216ENST00000573607 GRIN3BO60391 1043 aa9.34□□□□□ -0.91
TOM1L1-216ENST00000573607 BPNT1O95861 308 aa9.34□□□□□ -0.91
TOM1L1-216ENST00000573607 RPL6Q02878 288 aaKnown RBP9.34□□□□□ -0.91
TOM1L1-216ENST00000573607 PLPPR2Q96GM1 343 aa9.34□□□□□ -0.91
TOM1L1-216ENST00000573607 WDR18Q9BV38 432 aa9.34□□□□□ -0.91
TOM1L1-216ENST00000573607 KRT82Q9NSB4 513 aa9.34□□□□□ -0.91
TOM1L1-216ENST00000573607 CSADQ9Y600 493 aa9.34□□□□□ -0.91
TOM1L1-216ENST00000573607 MRVI1Q9Y6F6 885 aa9.34□□□□□ -0.91
TOM1L1-216ENST00000573607 DCDC2CA8MYV0 355 aa9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 GNB5O14775 395 aa9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 RAC1P63000 192 aa9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 CLCQ05315 142 aa9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 DUOXA2Q1HG44 320 aa9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 CWF19L2Q2TBE0 894 aaKnown RBP9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 WIPI1Q5MNZ9 446 aaPredicted RBP9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 SCARA3Q6AZY7 606 aa9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 GK5Q6ZS86 529 aa9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 SPATA32Q96LK8 384 aa9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 MKL2Q9ULH7 1088 aa9.33□□□□□ -0.92
TOM1L1-216ENST00000573607 GFRA2O00451 464 aa9.32□□□□□ -0.92
TOM1L1-216ENST00000573607 EIF4EBP3O60516 100 aaPredicted RBP9.32□□□□□ -0.92
TOM1L1-216ENST00000573607 AOC2O75106 756 aa9.32□□□□□ -0.92
TOM1L1-216ENST00000573607 SSBP05455 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
TOM1L1-216ENST00000573607 TRIM28Q13263 835 aaKnown RBP9.32□□□□□ -0.92
TOM1L1-216ENST00000573607 KIF4BQ2VIQ3 1234 aa9.32□□□□□ -0.92
TOM1L1-216ENST00000573607 ETFBP38117 255 aa9.31□□□□□ -0.92
TOM1L1-216ENST00000573607 GRIK4Q16099 956 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms