RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 CHST3Q7LGC8 479 aa34.35■■■■□ 3.09
CTDNEP1-208ENST00000573600 ZNF622Q969S3 477 aaKnown RBP eCLIP34.35■■■■□ 3.09
CTDNEP1-208ENST00000573600 DYNLL1P63167 89 aaKnown RBP34.35■■■■□ 3.09
CTDNEP1-208ENST00000573600 JAG2Q9Y219 1238 aa34.35■■■■□ 3.09
CTDNEP1-208ENST00000573600 STX6O43752 255 aa34.34■■■■□ 3.09
CTDNEP1-208ENST00000573600 SYT1P21579 422 aa34.34■■■■□ 3.09
CTDNEP1-208ENST00000573600 AKNAD1Q5T1N1 836 aa34.34■■■■□ 3.09
CTDNEP1-208ENST00000573600 ANTXR2P58335 489 aa34.33■■■■□ 3.09
CTDNEP1-208ENST00000573600 SDR42E1Q8WUS8 393 aa34.33■■■■□ 3.09
CTDNEP1-208ENST00000573600 STAG1Q8WVM7 1258 aa34.33■■■■□ 3.09
CTDNEP1-208ENST00000573600 LLPHQ9BRT6 129 aaKnown RBP34.33■■■■□ 3.09
CTDNEP1-208ENST00000573600 CRNKL1Q9BZJ0 848 aaKnown RBP34.33■■■■□ 3.09
CTDNEP1-208ENST00000573600 KRT23Q9C075 422 aa34.33■■■■□ 3.09
CTDNEP1-208ENST00000573600 DPP8Q6V1X1 898 aaPredicted RBP34.33■■■■□ 3.09
CTDNEP1-208ENST00000573600 TBC1D22AQ8WUA7 517 aa34.33■■■■□ 3.09
CTDNEP1-208ENST00000573600 COA1Q9GZY4 146 aa34.33■■■■□ 3.09
CTDNEP1-208ENST00000573600 RNF41Q9H4P4 317 aaPredicted RBP34.33■■■■□ 3.09
CTDNEP1-208ENST00000573600 PDCP20941 246 aa34.32■■■■□ 3.08
CTDNEP1-208ENST00000573600 MFSD6Q6ZSS7 791 aa34.32■■■■□ 3.08
CTDNEP1-208ENST00000573600 ANAPC4Q9UJX5 808 aa34.32■■■■□ 3.08
CTDNEP1-208ENST00000573600 LDHCP07864 332 aa34.31■■■■□ 3.08
CTDNEP1-208ENST00000573600 CTDSPL2Q05D32 466 aa34.31■■■■□ 3.08
CTDNEP1-208ENST00000573600 SCRN1Q12765 414 aa34.31■■■■□ 3.08
CTDNEP1-208ENST00000573600 AATFQ9NY61 560 aaKnown RBP eCLIP34.31■■■■□ 3.08
CTDNEP1-208ENST00000573600 NEDD4P46934 1319 aa34.3■■■■□ 3.08
CTDNEP1-208ENST00000573600 PPARAQ07869 468 aa34.3■■■■□ 3.08
CTDNEP1-208ENST00000573600 CCDC125Q86Z20 511 aa34.3■■■■□ 3.08
CTDNEP1-208ENST00000573600 TMEM87BQ96K49 555 aa34.3■■■■□ 3.08
CTDNEP1-208ENST00000573600 ZC3H12CQ9C0D7 883 aaKnown RBP34.3■■■■□ 3.08
CTDNEP1-208ENST00000573600 ZSCAN22P10073 491 aaPredicted RBP34.3■■■■□ 3.08
CTDNEP1-208ENST00000573600 PDIA3P30101 505 aaKnown RBP34.3■■■■□ 3.08
CTDNEP1-208ENST00000573600 SLC16A10Q8TF71 515 aa34.3■■■■□ 3.08
CTDNEP1-208ENST00000573600 CNKSR1Q969H4 720 aa34.3■■■■□ 3.08
CTDNEP1-208ENST00000573600 FAM205AQ6ZU69 1335 aa34.29■■■■□ 3.08
CTDNEP1-208ENST00000573600 B4E1Z4 1266 aa34.29■■■■□ 3.08
CTDNEP1-208ENST00000573600 EYA3Q99504 573 aa34.29■■■■□ 3.08
CTDNEP1-208ENST00000573600 ATP8A2Q9NTI2 1148 aa34.29■■■■□ 3.08
CTDNEP1-208ENST00000573600 FOXD4L5Q5VV16 416 aaPredicted RBP34.28■■■■□ 3.08
CTDNEP1-208ENST00000573600 FOXD4L4Q8WXT5 416 aaPredicted RBP34.28■■■■□ 3.08
CTDNEP1-208ENST00000573600 SKOR2Q2VWA4 1001 aaPredicted RBP34.27■■■■□ 3.08
CTDNEP1-208ENST00000573600 CYB5R4Q7L1T6 521 aa34.27■■■■□ 3.08
CTDNEP1-208ENST00000573600 CERS3Q8IU89 383 aa34.27■■■■□ 3.08
CTDNEP1-208ENST00000573600 ANGEL1Q9UNK9 670 aaKnown RBP34.27■■■■□ 3.08
CTDNEP1-208ENST00000573600 TRAK2O60296 914 aa34.27■■■■□ 3.08
CTDNEP1-208ENST00000573600 LARP1BQ659C4 914 aaKnown RBP34.27■■■■□ 3.08
CTDNEP1-208ENST00000573600 MCTP1Q6DN14 999 aa34.27■■■■□ 3.08
CTDNEP1-208ENST00000573600 BAZ2AQ9UIF9 1905 aaKnown RBP34.26■■■■□ 3.07
CTDNEP1-208ENST00000573600 BAG3O95817 575 aa34.26■■■■□ 3.07
CTDNEP1-208ENST00000573600 NOL10Q9BSC4 688 aaKnown RBP34.26■■■■□ 3.07
CTDNEP1-208ENST00000573600 MTA3Q9BTC8 594 aa34.26■■■■□ 3.07
CTDNEP1-208ENST00000573600 RIMBP2O15034 1052 aa34.25■■■■□ 3.07
CTDNEP1-208ENST00000573600 SMARCC2Q8TAQ2 1214 aa34.25■■■■□ 3.07
CTDNEP1-208ENST00000573600 NAP1L2Q9ULW6 460 aaPredicted RBP34.25■■■■□ 3.07
CTDNEP1-208ENST00000573600 MYH2Q9UKX2 1941 aa34.25■■■■□ 3.07
CTDNEP1-208ENST00000573600 MINDY4BA8MYZ0 360 aa34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 SH2B2O14492 632 aaPredicted RBP34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 PCP11498 1178 aaKnown RBP34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 PPP4CP60510 307 aa34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 HMGN5P82970 282 aaKnown RBP34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 SLF2Q8IX21 1173 aa34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 ATP6V1DQ9Y5K8 247 aa34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 KLF18A0A0U1RQI7 1052 aa34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 MFSD14BQ5SR56 506 aa34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 GPHNQ9NQX3 736 aaPredicted RBP34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 MTMR6Q9Y217 621 aa34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 SLX4Q8IY92 1834 aa34.24■■■■□ 3.07
CTDNEP1-208ENST00000573600 MROH7-TTC4A0A0A0MT08 1334 aa34.23■■■■□ 3.07
CTDNEP1-208ENST00000573600 F13A1P00488 732 aa34.23■■■■□ 3.07
CTDNEP1-208ENST00000573600 OLFM4Q6UX06 510 aa34.23■■■■□ 3.07
CTDNEP1-208ENST00000573600 DCP1AQ9NPI6 582 aaPredicted RBP34.23■■■■□ 3.07
CTDNEP1-208ENST00000573600 KIF3AQ9Y496 699 aa34.23■■■■□ 3.07
CTDNEP1-208ENST00000573600 LAMB1P07942 1786 aa34.23■■■■□ 3.07
CTDNEP1-208ENST00000573600 DHX16O60231 1041 aaKnown RBP34.22■■■■□ 3.07
CTDNEP1-208ENST00000573600 KDM4AO75164 1064 aa34.22■■■■□ 3.07
CTDNEP1-208ENST00000573600 ZSWIM5Q9P217 1185 aa34.22■■■■□ 3.07
CTDNEP1-208ENST00000573600 SUGT1Q9Y2Z0 365 aa34.22■■■■□ 3.07
CTDNEP1-208ENST00000573600 TACC3Q9Y6A5 838 aa34.22■■■■□ 3.07
CTDNEP1-208ENST00000573600 CHRNA5P30532 468 aa34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 CCT2P78371 535 aaKnown RBP34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 GRIK5Q16478 980 aa34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 CTR9Q6PD62 1173 aa34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 NSUN7Q8NE18 718 aaKnown RBP34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 ARPP21Q9UBL0 812 aaPredicted RBP34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 BRPF3Q9ULD4 1205 aa34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 C10orf71Q711Q0 1435 aa34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 LIFRP42702 1097 aa34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 SBK1Q52WX2 424 aa34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 IGDCC4Q8TDY8 1250 aa34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 INCENPQ9NQS7 918 aa34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 TOMM22Q9NS69 142 aa34.21■■■■□ 3.07
CTDNEP1-208ENST00000573600 SART3Q15020 963 aaKnown RBP34.2■■■■□ 3.07
CTDNEP1-208ENST00000573600 CC2D2BQ6DHV5 1058 aa34.2■■■■□ 3.07
CTDNEP1-208ENST00000573600 PDGFDQ9GZP0 370 aaPredicted RBP34.2■■■■□ 3.07
CTDNEP1-208ENST00000573600 GOLGA8BA8MQT2 603 aa34.19■■■■□ 3.06
CTDNEP1-208ENST00000573600 JAK2O60674 1132 aa34.19■■■■□ 3.06
CTDNEP1-208ENST00000573600 GTF2IP78347 998 aa34.19■■■■□ 3.06
CTDNEP1-208ENST00000573600 DIXDC1Q155Q3 683 aa34.19■■■■□ 3.06
CTDNEP1-208ENST00000573600 SGMS1Q86VZ5 419 aa34.19■■■■□ 3.06
CTDNEP1-208ENST00000573600 FAM184AQ8NB25 1140 aa34.19■■■■□ 3.06
CTDNEP1-208ENST00000573600 FAM163AQ96GL9 167 aaPredicted RBP34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms