RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 IGSF3O75054 1194 aa16.26■□□□□ 0.19
LINC01996-201ENST00000573270 HDLBPQ00341 1268 aaKnown RBP16.26■□□□□ 0.19
LINC01996-201ENST00000573270 CASC1Q6TDU7 716 aa16.26■□□□□ 0.19
LINC01996-201ENST00000573270 SAMD7Q7Z3H4 446 aa16.26■□□□□ 0.19
LINC01996-201ENST00000573270 ZNF526Q8TF50 670 aaPredicted RBP16.26■□□□□ 0.19
LINC01996-201ENST00000573270 AIDAQ96BJ3 306 aa16.26■□□□□ 0.19
LINC01996-201ENST00000573270 ZDHHC15Q96MV8 337 aa16.26■□□□□ 0.19
LINC01996-201ENST00000573270 NOL10Q9BSC4 688 aaKnown RBP16.26■□□□□ 0.19
LINC01996-201ENST00000573270 SIPA1L1O43166 1804 aa16.26■□□□□ 0.19
LINC01996-201ENST00000573270 CCDC171Q6TFL3 1326 aa16.25■□□□□ 0.19
LINC01996-201ENST00000573270 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
LINC01996-201ENST00000573270 GPAA1O43292 621 aa16.25■□□□□ 0.19
LINC01996-201ENST00000573270 LDHCP07864 332 aa16.25■□□□□ 0.19
LINC01996-201ENST00000573270 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
LINC01996-201ENST00000573270 DLGAP5Q15398 846 aa16.25■□□□□ 0.19
LINC01996-201ENST00000573270 C8orf34Q49A92 452 aa16.25■□□□□ 0.19
LINC01996-201ENST00000573270 TMED8Q6PL24 325 aaPredicted RBP16.25■□□□□ 0.19
LINC01996-201ENST00000573270 HHIPL2Q6UWX4 724 aa16.25■□□□□ 0.19
LINC01996-201ENST00000573270 SH3RF3Q8TEJ3 882 aaPredicted RBP16.25■□□□□ 0.19
LINC01996-201ENST00000573270 RIOK1Q9BRS2 568 aaKnown RBP16.25■□□□□ 0.19
LINC01996-201ENST00000573270 ESYT1Q9BSJ8 1104 aa16.25■□□□□ 0.19
LINC01996-201ENST00000573270 HELLSQ9NRZ9 838 aa16.25■□□□□ 0.19
LINC01996-201ENST00000573270 GPR75-ASB3A0A0A6YYF3 556 aa16.24■□□□□ 0.19
LINC01996-201ENST00000573270 MCMDC2Q4G0Z9 681 aa16.24■□□□□ 0.19
LINC01996-201ENST00000573270 RBM26Q5T8P6 1007 aaKnown RBP16.24■□□□□ 0.19
LINC01996-201ENST00000573270 APOBEC3HQ6NTF7 200 aaKnown RBP16.24■□□□□ 0.19
LINC01996-201ENST00000573270 TICAM2Q86XR7 235 aa16.24■□□□□ 0.19
LINC01996-201ENST00000573270 FAM163AQ96GL9 167 aaPredicted RBP16.24■□□□□ 0.19
LINC01996-201ENST00000573270 HACL1Q9UJ83 578 aa16.24■□□□□ 0.19
LINC01996-201ENST00000573270 ASTN2O75129 1339 aaPredicted RBP16.23■□□□□ 0.19
LINC01996-201ENST00000573270 CLRN2A0PK11 232 aa16.23■□□□□ 0.19
LINC01996-201ENST00000573270 H7C1D1 291 aa16.23■□□□□ 0.19
LINC01996-201ENST00000573270 SGSM2O43147 1006 aa16.23■□□□□ 0.19
LINC01996-201ENST00000573270 CACNB3P54284 484 aa16.23■□□□□ 0.19
LINC01996-201ENST00000573270 RHBDL3P58872 404 aa16.23■□□□□ 0.19
LINC01996-201ENST00000573270 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
LINC01996-201ENST00000573270 MTMR14Q8NCE2 650 aa16.23■□□□□ 0.19
LINC01996-201ENST00000573270 RUFY2Q8WXA3 655 aa16.23■□□□□ 0.19
LINC01996-201ENST00000573270 ZBED3Q96IU2 234 aaPredicted RBP16.23■□□□□ 0.19
LINC01996-201ENST00000573270 PRMT6Q96LA8 375 aaPredicted RBP16.23■□□□□ 0.19
LINC01996-201ENST00000573270 RNF39Q9H2S5 420 aa16.23■□□□□ 0.19
LINC01996-201ENST00000573270 ADARB2Q9NS39 739 aaKnown RBP16.23■□□□□ 0.19
LINC01996-201ENST00000573270 POTECB2RU33 542 aa16.22■□□□□ 0.19
LINC01996-201ENST00000573270 WNT10BO00744 389 aa16.22■□□□□ 0.19
LINC01996-201ENST00000573270 BAG3O95817 575 aa16.22■□□□□ 0.19
LINC01996-201ENST00000573270 EPHX2P34913 555 aa16.22■□□□□ 0.19
LINC01996-201ENST00000573270 NBPF9Q3BBW0 867 aa16.22■□□□□ 0.19
LINC01996-201ENST00000573270 CDC42EP5Q6NZY7 148 aa16.22■□□□□ 0.19
LINC01996-201ENST00000573270 TDRD3Q9H7E2 651 aaKnown RBP16.22■□□□□ 0.19
LINC01996-201ENST00000573270 EPB41L4AQ9HCS5 686 aaPredicted RBP16.22■□□□□ 0.19
LINC01996-201ENST00000573270 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
LINC01996-201ENST00000573270 PRKAB2O43741 272 aa16.21■□□□□ 0.19
LINC01996-201ENST00000573270 PICALMQ13492 652 aa16.21■□□□□ 0.19
LINC01996-201ENST00000573270 SPDYE2Q495Y8 402 aa16.21■□□□□ 0.19
LINC01996-201ENST00000573270 VPS53Q5VIR6 699 aa16.21■□□□□ 0.19
LINC01996-201ENST00000573270 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.19
LINC01996-201ENST00000573270 STRBPQ96SI9 672 aaKnown RBP16.21■□□□□ 0.19
LINC01996-201ENST00000573270 MRIQ9BWK5 157 aa16.21■□□□□ 0.19
LINC01996-201ENST00000573270 CRNKL1Q9BZJ0 848 aaKnown RBP16.21■□□□□ 0.19
LINC01996-201ENST00000573270 TAF1DQ9H5J8 278 aaPredicted RBP16.21■□□□□ 0.19
LINC01996-201ENST00000573270 NMRK2Q9NPI5 230 aa16.21■□□□□ 0.19
LINC01996-201ENST00000573270 USP40Q9NVE5 1235 aa16.21■□□□□ 0.19
LINC01996-201ENST00000573270 GGA3Q9NZ52 723 aa16.21■□□□□ 0.19
LINC01996-201ENST00000573270 FOXP2O15409 715 aa16.2■□□□□ 0.18
LINC01996-201ENST00000573270 PLCG2P16885 1265 aa16.2■□□□□ 0.18
LINC01996-201ENST00000573270 MMP14P50281 582 aa16.2■□□□□ 0.18
LINC01996-201ENST00000573270 HIRAP54198 1017 aaPredicted RBP16.2■□□□□ 0.18
LINC01996-201ENST00000573270 PPP4CP60510 307 aa16.2■□□□□ 0.18
LINC01996-201ENST00000573270 NFIAQ12857 509 aa16.2■□□□□ 0.18
LINC01996-201ENST00000573270 VEZTQ9HBM0 779 aa16.2■□□□□ 0.18
LINC01996-201ENST00000573270 ANO2Q9NQ90 1003 aa16.2■□□□□ 0.18
LINC01996-201ENST00000573270 ZNF70Q9UC06 446 aaPredicted RBP16.2■□□□□ 0.18
LINC01996-201ENST00000573270 SLC4A4Q9Y6R1 1079 aa16.2■□□□□ 0.18
LINC01996-201ENST00000573270 FLT1P17948 1338 aa16.19■□□□□ 0.18
LINC01996-201ENST00000573270 MYH8P13535 1937 aa16.19■□□□□ 0.18
LINC01996-201ENST00000573270 MYO1BO43795 1136 aa16.19■□□□□ 0.18
LINC01996-201ENST00000573270 WDHD1O75717 1129 aaPredicted RBP16.19■□□□□ 0.18
LINC01996-201ENST00000573270 MFAP1P55081 439 aaKnown RBP16.19■□□□□ 0.18
LINC01996-201ENST00000573270 EAPPQ56P03 285 aaPredicted RBP16.19■□□□□ 0.18
LINC01996-201ENST00000573270 CERS3Q8IU89 383 aa16.19■□□□□ 0.18
LINC01996-201ENST00000573270 MAPKAPK5Q8IW41 473 aa16.19■□□□□ 0.18
LINC01996-201ENST00000573270 ZNF784Q8NCA9 323 aaPredicted RBP16.19■□□□□ 0.18
LINC01996-201ENST00000573270 TGFBRAP1Q8WUH2 860 aa16.19■□□□□ 0.18
LINC01996-201ENST00000573270 RRAGCQ9HB90 399 aa16.19■□□□□ 0.18
LINC01996-201ENST00000573270 DDX4Q9NQI0 724 aaKnown RBP16.19■□□□□ 0.18
LINC01996-201ENST00000573270 TMOD2Q9NZR1 351 aa16.19■□□□□ 0.18
LINC01996-201ENST00000573270 SCAF8Q9UPN6 1271 aaKnown RBP16.19■□□□□ 0.18
LINC01996-201ENST00000573270 COL2A1P02458 1487 aaPredicted RBP16.18■□□□□ 0.18
LINC01996-201ENST00000573270 CNTNAP1P78357 1384 aa16.18■□□□□ 0.18
LINC01996-201ENST00000573270 USP5P45974 858 aa16.18■□□□□ 0.18
LINC01996-201ENST00000573270 ANGEL2Q5VTE6 544 aaKnown RBP16.18■□□□□ 0.18
LINC01996-201ENST00000573270 OTOFQ9HC10 1997 aa16.17■□□□□ 0.18
LINC01996-201ENST00000573270 TCP10L2B9ZVM9 353 aa16.17■□□□□ 0.18
LINC01996-201ENST00000573270 POTEIP0CG38 1075 aa16.17■□□□□ 0.18
LINC01996-201ENST00000573270 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
LINC01996-201ENST00000573270 HSPD1P10809 573 aaKnown RBP16.17■□□□□ 0.18
LINC01996-201ENST00000573270 GNAT2P19087 354 aa16.17■□□□□ 0.18
LINC01996-201ENST00000573270 PTH1RQ03431 593 aa16.17■□□□□ 0.18
LINC01996-201ENST00000573270 SLC4A8Q2Y0W8 1093 aa16.17■□□□□ 0.18
LINC01996-201ENST00000573270 USP50Q70EL3 339 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms