RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TBX2Q13207 712 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 PABPC4Q13310 644 aaKnown RBP eCLIP6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 SLC9A5Q14940 896 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 PPP2R5EQ16537 467 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 ZC3H12BQ5HYM0 836 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 RNF219Q5W0B1 726 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 MRPL50Q8N5N7 158 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 VPS37AQ8NEZ2 397 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 ST13P5Q8NFI4 369 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 GJA10Q969M2 543 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 PGBD4Q96DM1 585 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 MYO19Q96H55 970 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 SLC26A8Q96RN1 970 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 YIPF4Q9BSR8 244 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 ZFATQ9P243 1243 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 GTF2IRD1Q9UHL9 959 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 ZMYM5Q9UJ78 669 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 SYNPO2Q9UMS6 1093 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 SUPT16HQ9Y5B9 1047 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 PPP1R12BO60237 982 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 NBNO60934 754 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 ABLIM3O94929 683 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 MYCP01106 439 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 RPLP1P05386 114 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 SLC5A1P13866 664 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 SERPINB3P29508 390 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 GIPRP48546 466 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 LAPTM4AQ15012 233 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 LONRF2Q1L5Z9 754 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 C8orf34Q49A92 452 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 SWT1Q5T5J6 900 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 MZT2BQ6NZ67 158 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 MAATS1Q7Z4T9 603 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 TNS4Q8IZW8 715 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 OR6P1Q8NGX9 317 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 FRS2Q8WU20 508 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 RPGRQ92834 1020 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 NKD1Q969G9 470 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 CCDC74AQ96AQ1 378 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 TIFAQ96CG3 184 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 PAWRQ96IZ0 340 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 TBATAQ96M53 351 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 CRBNQ96SW2 442 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 ODF2LQ9ULJ1 636 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 LUC7L2Q9Y383 392 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 PCDHB11Q9Y5F2 797 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 DGKBQ9Y6T7 804 aa6.06□□□□□ -1.44
TOPBP1-210ENST00000572787 DNAJC25-GNG10A0A024R161 153 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 A0A1W2PRU2 124 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 PABPN1LA6NDY0 278 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 SMAPO00193 183 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 SNX2O60749 519 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 HMMRO75330 724 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 TNFRSF21O75509 655 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 HNRNPCP07910 306 aaKnown RBP eCLIP6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 CLK1P49759 484 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 RENBPP51606 427 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 SEPT6Q14141 434 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 SAFBQ15424 915 aaKnown RBP eCLIP6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 MINDY4Q4G0A6 757 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 COBLL1Q53SF7 1204 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 SPECC1Q5M775 1068 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 C1orf228Q6PIY5 440 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 LVRNQ6Q4G3 990 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 PI16Q6UXB8 463 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 SPATC1Q76KD6 591 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 NDUFAF2Q8N183 169 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 FAM169BQ8N8A8 192 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 WDR66Q8TBY9 1149 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 EPS8L3Q8TE67 593 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 AGBL1Q96MI9 1066 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 SLC4A5Q9BY07 1137 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 RHOBTB2Q9BYZ6 727 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 PUS7LQ9H0K6 701 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 TSPAN10Q9H1Z9 355 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 CNNM2Q9H8M5 875 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 LUC7LQ9NQ29 371 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 LRFN2Q9ULH4 789 aa6.05□□□□□ -1.44
TOPBP1-210ENST00000572787 hCG_1984214I3L0E3 225 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 GREM1O60565 184 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 RHOBTB3O94955 611 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 CFHP08603 1231 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 TNFAIP3P21580 790 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 ZAP70P43403 619 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 HDGFP51858 240 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 GJA9P57773 515 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 NEXNQ0ZGT2 675 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 STK3Q13188 491 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 TCIRG1Q13488 830 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 GRIN2CQ14957 1233 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 ARMC3Q5W041 872 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 LARP1BQ659C4 914 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 FBXL19Q6PCT2 694 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 CCDC81Q6ZN84 652 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 SLITRK4Q8IW52 837 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 LMNTD2Q8IXW0 634 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 TRIM22Q8IYM9 498 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 OTUD6BQ8N6M0 293 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 USP33Q8TEY7 942 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 TTC17Q96AE7 1141 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms