RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 TIAM2Q8IVF5 1701 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 RIMBP2O15034 1052 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 GJB2P29033 226 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 CTDSPL2Q05D32 466 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 APOBRQ0VD83 1088 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 FAM205AQ6ZU69 1335 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 DDX11L8A8MPP1 907 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 PFKFB2O60825 505 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 GRIK5Q16478 980 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 AKNAD1Q5T1N1 836 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 TBC1D22AQ8WUA7 517 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 CRNKL1Q9BZJ0 848 aaKnown RBP24.26■■□□□ 1.47
CHRNE-202ENST00000572438 NEDD4P46934 1319 aa24.26■■□□□ 1.47
CHRNE-202ENST00000572438 C10orf71Q711Q0 1435 aa24.25■■□□□ 1.47
CHRNE-202ENST00000572438 CCDC88AQ3V6T2 1871 aa24.25■■□□□ 1.47
CHRNE-202ENST00000572438 EVCP57679 992 aa24.25■■□□□ 1.47
CHRNE-202ENST00000572438 STAG1Q8WVM7 1258 aa24.25■■□□□ 1.47
CHRNE-202ENST00000572438 EYA3Q99504 573 aa24.25■■□□□ 1.47
CHRNE-202ENST00000572438 CNNM2Q9H8M5 875 aa24.25■■□□□ 1.47
CHRNE-202ENST00000572438 PPARAQ07869 468 aa24.24■■□□□ 1.47
CHRNE-202ENST00000572438 MFSD6Q6ZSS7 791 aa24.24■■□□□ 1.47
CHRNE-202ENST00000572438 ZNF274Q96GC6 653 aaPredicted RBP24.24■■□□□ 1.47
CHRNE-202ENST00000572438 ANAPC4Q9UJX5 808 aa24.24■■□□□ 1.47
CHRNE-202ENST00000572438 WDR33Q9C0J8 1336 aaKnown RBP24.24■■□□□ 1.47
CHRNE-202ENST00000572438 KIAA1551Q9HCM1 1747 aa24.24■■□□□ 1.47
CHRNE-202ENST00000572438 B4E1Z4 1266 aa24.24■■□□□ 1.47
CHRNE-202ENST00000572438 SOCS7O14512 581 aa24.24■■□□□ 1.47
CHRNE-202ENST00000572438 BAG4O95429 457 aaKnown RBP24.24■■□□□ 1.47
CHRNE-202ENST00000572438 LDHCP07864 332 aa24.24■■□□□ 1.47
CHRNE-202ENST00000572438 KRT23Q9C075 422 aa24.24■■□□□ 1.47
CHRNE-202ENST00000572438 MFSD14BQ5SR56 506 aa24.23■■□□□ 1.47
CHRNE-202ENST00000572438 CYB5R4Q7L1T6 521 aa24.23■■□□□ 1.47
CHRNE-202ENST00000572438 RNF41Q9H4P4 317 aaPredicted RBP24.23■■□□□ 1.47
CHRNE-202ENST00000572438 GPHNQ9NQX3 736 aaPredicted RBP24.23■■□□□ 1.47
CHRNE-202ENST00000572438 TACC3Q9Y6A5 838 aa24.23■■□□□ 1.47
CHRNE-202ENST00000572438 SYT1P21579 422 aa24.22■■□□□ 1.47
CHRNE-202ENST00000572438 SCRN1Q12765 414 aa24.22■■□□□ 1.47
CHRNE-202ENST00000572438 DIXDC1Q155Q3 683 aa24.22■■□□□ 1.47
CHRNE-202ENST00000572438 ATP8A2Q9NTI2 1148 aa24.22■■□□□ 1.47
CHRNE-202ENST00000572438 PDIA3P30101 505 aaKnown RBP24.21■■□□□ 1.47
CHRNE-202ENST00000572438 NKX2-3Q8TAU0 364 aa24.21■■□□□ 1.47
CHRNE-202ENST00000572438 INCENPQ9NQS7 918 aa24.21■■□□□ 1.47
CHRNE-202ENST00000572438 MROH7-TTC4A0A0A0MT08 1334 aa24.21■■□□□ 1.47
CHRNE-202ENST00000572438 MINDY4BA8MYZ0 360 aa24.21■■□□□ 1.47
CHRNE-202ENST00000572438 STX6O43752 255 aa24.21■■□□□ 1.47
CHRNE-202ENST00000572438 BAG3O95817 575 aa24.21■■□□□ 1.47
CHRNE-202ENST00000572438 PPP4CP60510 307 aa24.21■■□□□ 1.47
CHRNE-202ENST00000572438 GTF2IP78347 998 aa24.21■■□□□ 1.47
CHRNE-202ENST00000572438 C7orf43Q8WVR3 580 aa24.21■■□□□ 1.47
CHRNE-202ENST00000572438 TMEM87BQ96K49 555 aa24.21■■□□□ 1.47
CHRNE-202ENST00000572438 LLPHQ9BRT6 129 aaKnown RBP24.21■■□□□ 1.47
CHRNE-202ENST00000572438 SLX4Q8IY92 1834 aa24.2■■□□□ 1.47
CHRNE-202ENST00000572438 FOXD4L5Q5VV16 416 aaPredicted RBP24.2■■□□□ 1.46
CHRNE-202ENST00000572438 FOXD4L4Q8WXT5 416 aaPredicted RBP24.2■■□□□ 1.46
CHRNE-202ENST00000572438 CHMP4CQ96CF2 233 aa24.2■■□□□ 1.46
CHRNE-202ENST00000572438 NOL10Q9BSC4 688 aaKnown RBP24.2■■□□□ 1.46
CHRNE-202ENST00000572438 DCP1AQ9NPI6 582 aaPredicted RBP24.2■■□□□ 1.46
CHRNE-202ENST00000572438 PDIA4P13667 645 aaKnown RBP24.19■■□□□ 1.46
CHRNE-202ENST00000572438 CC2D2BQ6DHV5 1058 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 CTR9Q6PD62 1173 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 RTFDC1Q9BY42 306 aaPredicted RBP24.19■■□□□ 1.46
CHRNE-202ENST00000572438 NAP1L2Q9ULW6 460 aaPredicted RBP24.19■■□□□ 1.46
CHRNE-202ENST00000572438 ANGEL1Q9UNK9 670 aaKnown RBP24.19■■□□□ 1.46
CHRNE-202ENST00000572438 GOLGA6L22H0YM25 854 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 SH2B2O14492 632 aaPredicted RBP24.19■■□□□ 1.46
CHRNE-202ENST00000572438 DTNBO60941 627 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 KDM4AO75164 1064 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 PTMSP20962 102 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 DOK7Q18PE1 504 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 CERS3Q8IU89 383 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 SLF2Q8IX21 1173 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 ZSWIM5Q9P217 1185 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 BRPF3Q9ULD4 1205 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 SUGT1Q9Y2Z0 365 aa24.19■■□□□ 1.46
CHRNE-202ENST00000572438 KLF18A0A0U1RQI7 1052 aa24.18■■□□□ 1.46
CHRNE-202ENST00000572438 G3V3G9 751 aa24.18■■□□□ 1.46
CHRNE-202ENST00000572438 PDCP20941 246 aa24.18■■□□□ 1.46
CHRNE-202ENST00000572438 DCAF8Q5TAQ9 597 aa24.18■■□□□ 1.46
CHRNE-202ENST00000572438 FAM163AQ96GL9 167 aaPredicted RBP24.18■■□□□ 1.46
CHRNE-202ENST00000572438 ZNF219Q9P2Y4 722 aaPredicted RBP24.18■■□□□ 1.46
CHRNE-202ENST00000572438 USP17L12C9JPN9 530 aa24.17■■□□□ 1.46
CHRNE-202ENST00000572438 USP17L21D6R901 530 aa24.17■■□□□ 1.46
CHRNE-202ENST00000572438 ZSCAN22P10073 491 aaPredicted RBP24.17■■□□□ 1.46
CHRNE-202ENST00000572438 SH3RF3Q8TEJ3 882 aaPredicted RBP24.17■■□□□ 1.46
CHRNE-202ENST00000572438 TOMM22Q9NS69 142 aa24.17■■□□□ 1.46
CHRNE-202ENST00000572438 PCP11498 1178 aaKnown RBP24.17■■□□□ 1.46
CHRNE-202ENST00000572438 CCT2P78371 535 aaKnown RBP24.17■■□□□ 1.46
CHRNE-202ENST00000572438 SBK1Q52WX2 424 aa24.17■■□□□ 1.46
CHRNE-202ENST00000572438 SMARCC2Q8TAQ2 1214 aa24.17■■□□□ 1.46
CHRNE-202ENST00000572438 IGDCC4Q8TDY8 1250 aa24.17■■□□□ 1.46
CHRNE-202ENST00000572438 ARPP21Q9UBL0 812 aaPredicted RBP24.17■■□□□ 1.46
CHRNE-202ENST00000572438 CYP2D7A0A087X1C5 515 aa24.16■■□□□ 1.46
CHRNE-202ENST00000572438 GPR75-ASB3A0A0A6YYF3 556 aa24.16■■□□□ 1.46
CHRNE-202ENST00000572438 JAK2O60674 1132 aa24.16■■□□□ 1.46
CHRNE-202ENST00000572438 RRP12Q5JTH9 1297 aaKnown RBP24.16■■□□□ 1.46
CHRNE-202ENST00000572438 LARP1BQ659C4 914 aaKnown RBP24.16■■□□□ 1.46
CHRNE-202ENST00000572438 PODNQ7Z5L7 613 aa24.16■■□□□ 1.46
CHRNE-202ENST00000572438 FBXW7Q969H0 707 aa24.16■■□□□ 1.46
CHRNE-202ENST00000572438 MTA3Q9BTC8 594 aa24.16■■□□□ 1.46
CHRNE-202ENST00000572438 MTMR6Q9Y217 621 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms