RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 IQSEC3Q9UPP2 1182 aaPredicted RBP20.49■□□□□ 0.87
RPAIN-208ENST00000571043 GJB2P29033 226 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 GPR162Q16538 588 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 DOK7Q18PE1 504 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 TTLL5Q6EMB2 1281 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 LARGE2Q8N3Y3 721 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 G3V3G9 751 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 STX6O43752 255 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 SYT1P21579 422 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 RASSF7Q02833 373 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 ALX1Q15699 326 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 DCAF8Q5TAQ9 597 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 NECAB1Q8N987 351 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 DBNDD1Q9H9R9 158 aa20.48■□□□□ 0.87
RPAIN-208ENST00000571043 PDS5AQ29RF7 1337 aaKnown RBP20.47■□□□□ 0.87
RPAIN-208ENST00000571043 DICER1Q9UPY3 1922 aaKnown RBP20.47■□□□□ 0.87
RPAIN-208ENST00000571043 GRIN3BO60391 1043 aa20.47■□□□□ 0.87
RPAIN-208ENST00000571043 ZMYM6O95789 1325 aa20.47■□□□□ 0.87
RPAIN-208ENST00000571043 ZSCAN22P10073 491 aaPredicted RBP20.47■□□□□ 0.87
RPAIN-208ENST00000571043 PRELPP51888 382 aa20.47■□□□□ 0.87
RPAIN-208ENST00000571043 SCN9AQ15858 1988 aa20.47■□□□□ 0.87
RPAIN-208ENST00000571043 AIDAQ96BJ3 306 aa20.47■□□□□ 0.87
RPAIN-208ENST00000571043 STRBPQ96SI9 672 aaKnown RBP20.47■□□□□ 0.87
RPAIN-208ENST00000571043 LMBRD1Q9NUN5 540 aa20.47■□□□□ 0.87
RPAIN-208ENST00000571043 ZNF213O14771 459 aa20.46■□□□□ 0.87
RPAIN-208ENST00000571043 ECE2O60344 883 aa20.46■□□□□ 0.87
RPAIN-208ENST00000571043 KLHL40Q2TBA0 621 aa20.46■□□□□ 0.87
RPAIN-208ENST00000571043 MAGEB6Q8N7X4 407 aa20.46■□□□□ 0.87
RPAIN-208ENST00000571043 PDCP20941 246 aa20.45■□□□□ 0.86
RPAIN-208ENST00000571043 FGD1P98174 961 aa20.45■□□□□ 0.86
RPAIN-208ENST00000571043 GTF3C6Q969F1 213 aa20.45■□□□□ 0.86
RPAIN-208ENST00000571043 MYO5AQ9Y4I1 1855 aaKnown RBP20.45■□□□□ 0.86
RPAIN-208ENST00000571043 COL4A5P29400 1685 aa20.45■□□□□ 0.86
RPAIN-208ENST00000571043 FAM205AQ6ZU69 1335 aa20.44■□□□□ 0.86
RPAIN-208ENST00000571043 WDR19Q8NEZ3 1342 aa20.44■□□□□ 0.86
RPAIN-208ENST00000571043 GNAT2P19087 354 aa20.44■□□□□ 0.86
RPAIN-208ENST00000571043 LMNB1P20700 586 aa20.44■□□□□ 0.86
RPAIN-208ENST00000571043 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
RPAIN-208ENST00000571043 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
RPAIN-208ENST00000571043 JDP2Q8WYK2 163 aa20.44■□□□□ 0.86
RPAIN-208ENST00000571043 BRF1Q92994 677 aa20.44■□□□□ 0.86
RPAIN-208ENST00000571043 CHMP4CQ96CF2 233 aa20.44■□□□□ 0.86
RPAIN-208ENST00000571043 COL1A1P02452 1464 aaPredicted RBP20.44■□□□□ 0.86
RPAIN-208ENST00000571043 YDJCA8MPS7 323 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 PATL2C9JE40 543 aaKnown RBP20.43■□□□□ 0.86
RPAIN-208ENST00000571043 PFKFB2O60825 505 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 NIM1KQ8IY84 436 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 WDR66Q8TBY9 1149 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 KCNQ5Q9NR82 932 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 LRP2BPQ9P2M1 347 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 ZNRF3Q9ULT6 936 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 ATP6V1DQ9Y5K8 247 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 PSME4Q14997 1843 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 GTF2IP78347 998 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 NCOA7Q8NI08 942 aa20.43■□□□□ 0.86
RPAIN-208ENST00000571043 LLPHQ9BRT6 129 aaKnown RBP20.43■□□□□ 0.86
RPAIN-208ENST00000571043 DDX49Q9Y6V7 483 aaKnown RBP20.43■□□□□ 0.86
RPAIN-208ENST00000571043 SALL1Q9NSC2 1324 aa20.42■□□□□ 0.86
RPAIN-208ENST00000571043 PRPF40AO75400 957 aaKnown RBP20.42■□□□□ 0.86
RPAIN-208ENST00000571043 MBD4O95243 580 aa20.42■□□□□ 0.86
RPAIN-208ENST00000571043 F13A1P00488 732 aa20.42■□□□□ 0.86
RPAIN-208ENST00000571043 EVCP57679 992 aa20.42■□□□□ 0.86
RPAIN-208ENST00000571043 HAND2P61296 217 aa20.42■□□□□ 0.86
RPAIN-208ENST00000571043 CHAF1AQ13111 956 aaPredicted RBP20.42■□□□□ 0.86
RPAIN-208ENST00000571043 STRIP1Q5VSL9 837 aa20.42■□□□□ 0.86
RPAIN-208ENST00000571043 MB21D2Q8IYB1 491 aaPredicted RBP20.42■□□□□ 0.86
RPAIN-208ENST00000571043 ZNF274Q96GC6 653 aaPredicted RBP20.42■□□□□ 0.86
RPAIN-208ENST00000571043 MTMR6Q9Y217 621 aa20.42■□□□□ 0.86
RPAIN-208ENST00000571043 APPP05067 770 aa20.41■□□□□ 0.86
RPAIN-208ENST00000571043 MCM5P33992 734 aa20.41■□□□□ 0.86
RPAIN-208ENST00000571043 LRRC2Q9BYS8 371 aa20.41■□□□□ 0.86
RPAIN-208ENST00000571043 GZF1Q9H116 711 aaPredicted RBP20.41■□□□□ 0.86
RPAIN-208ENST00000571043 USP17L3A6NCW0 530 aa20.4■□□□□ 0.86
RPAIN-208ENST00000571043 USP17L4A6NCW7 530 aa20.4■□□□□ 0.86
RPAIN-208ENST00000571043 FZD9O00144 591 aa20.4■□□□□ 0.86
RPAIN-208ENST00000571043 STK3Q13188 491 aa20.4■□□□□ 0.86
RPAIN-208ENST00000571043 LARP1BQ659C4 914 aaKnown RBP20.4■□□□□ 0.86
RPAIN-208ENST00000571043 TMED8Q6PL24 325 aaPredicted RBP20.4■□□□□ 0.86
RPAIN-208ENST00000571043 USP17L1Q7RTZ2 530 aa20.4■□□□□ 0.86
RPAIN-208ENST00000571043 RALYLQ86SE5 291 aaKnown RBP20.4■□□□□ 0.86
RPAIN-208ENST00000571043 TBC1D22AQ8WUA7 517 aa20.4■□□□□ 0.86
RPAIN-208ENST00000571043 ISY1Q9ULR0 285 aaKnown RBP20.4■□□□□ 0.86
RPAIN-208ENST00000571043 JAG2Q9Y219 1238 aa20.4■□□□□ 0.86
RPAIN-208ENST00000571043 IGSF3O75054 1194 aa20.39■□□□□ 0.85
RPAIN-208ENST00000571043 FKBP1AP62942 108 aaKnown RBP20.39■□□□□ 0.85
RPAIN-208ENST00000571043 TRDNQ13061 729 aa20.39■□□□□ 0.85
RPAIN-208ENST00000571043 IFNL3Q8IZI9 196 aa20.39■□□□□ 0.85
RPAIN-208ENST00000571043 NACAP1Q9BZK3 213 aa20.39■□□□□ 0.85
RPAIN-208ENST00000571043 ZNF646O15015 1829 aaPredicted RBP20.39■□□□□ 0.85
RPAIN-208ENST00000571043 DOCK2Q92608 1830 aa20.39■□□□□ 0.85
RPAIN-208ENST00000571043 MYH7P12883 1935 aa20.39■□□□□ 0.85
RPAIN-208ENST00000571043 CYP7A1P22680 504 aa20.38■□□□□ 0.85
RPAIN-208ENST00000571043 APOBRQ0VD83 1088 aa20.38■□□□□ 0.85
RPAIN-208ENST00000571043 SCRN1Q12765 414 aa20.38■□□□□ 0.85
RPAIN-208ENST00000571043 DACT2Q5SW24 774 aa20.38■□□□□ 0.85
RPAIN-208ENST00000571043 SMARCC2Q8TAQ2 1214 aa20.38■□□□□ 0.85
RPAIN-208ENST00000571043 ARMT1Q9H993 441 aa20.38■□□□□ 0.85
RPAIN-208ENST00000571043 RAI14Q9P0K7 980 aa20.38■□□□□ 0.85
RPAIN-208ENST00000571043 ABCF2Q9UG63 623 aa20.38■□□□□ 0.85
RPAIN-208ENST00000571043 PRC1O43663 620 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms