RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 ARGLU1Q9NWB6 273 aaPredicted RBP16.76■□□□□ 0.27
ITGA3-216ENST00000570989 MROH7-TTC4A0A0A0MT08 1334 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 IKBKBO14920 756 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 ZNF202O95125 648 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 YEATS4O95619 227 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 AXDND1Q5T1B0 1012 aaPredicted RBP16.75■□□□□ 0.27
ITGA3-216ENST00000570989 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 EPC1Q9H2F5 836 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 PALLDQ8WX93 1383 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 EFCAB8A8MWE9 144 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 ST5P78524 1137 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 ZRSR1Q15695 479 aaKnown RBP16.75■□□□□ 0.27
ITGA3-216ENST00000570989 LRRFIP1Q32MZ4 808 aaKnown RBP16.75■□□□□ 0.27
ITGA3-216ENST00000570989 TRERF1Q96PN7 1200 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 DSCC1Q9BVC3 393 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 SRRTQ9BXP5 876 aaKnown RBP16.75■□□□□ 0.27
ITGA3-216ENST00000570989 GPHNQ9NQX3 736 aaPredicted RBP16.75■□□□□ 0.27
ITGA3-216ENST00000570989 TJP1Q07157 1748 aa16.75■□□□□ 0.27
ITGA3-216ENST00000570989 A0A087WZG4 1122 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 SPTLC2O15270 562 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 CCP110O43303 1012 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 NRDCO43847 1150 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 URI1O94763 535 aaPredicted RBP16.74■□□□□ 0.27
ITGA3-216ENST00000570989 GOLGA8FQ08AF8 430 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 GOLGA8DPQ0D2H9 430 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 CCDC158Q5M9N0 1113 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 TMEM139Q8IV31 216 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 MNS1Q8NEH6 495 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 BCL9O00512 1426 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 VWA3AA6NCI4 1184 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 POLR3DP05423 398 aaPredicted RBP16.74■□□□□ 0.27
ITGA3-216ENST00000570989 RAD51AP2Q09MP3 1159 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 ATG3Q9NT62 314 aa16.74■□□□□ 0.27
ITGA3-216ENST00000570989 ATP8B1O43520 1251 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 PFKFB1P16118 471 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 CASP7P55210 303 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 EVCP57679 992 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 TPM4P67936 248 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 SF3A1Q15459 793 aaKnown RBP16.73■□□□□ 0.27
ITGA3-216ENST00000570989 RABL6Q3YEC7 729 aaPredicted RBP16.73■□□□□ 0.27
ITGA3-216ENST00000570989 SMARCE1Q969G3 411 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 ZCCHC17Q9NP64 241 aaKnown RBP16.73■□□□□ 0.27
ITGA3-216ENST00000570989 EXOC5O00471 708 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 MYSM1Q5VVJ2 828 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 ISM2Q6H9L7 571 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 CC2D1AQ6P1N0 951 aaPredicted RBP16.73■□□□□ 0.27
ITGA3-216ENST00000570989 ZBTB3Q9H5J0 574 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 GJB4Q9NTQ9 266 aa16.73■□□□□ 0.27
ITGA3-216ENST00000570989 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
ITGA3-216ENST00000570989 HSPD1P10809 573 aaKnown RBP16.72■□□□□ 0.27
ITGA3-216ENST00000570989 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
ITGA3-216ENST00000570989 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
ITGA3-216ENST00000570989 HELLSQ9NRZ9 838 aa16.72■□□□□ 0.27
ITGA3-216ENST00000570989 FEZ2Q9UHY8 353 aaPredicted RBP16.72■□□□□ 0.27
ITGA3-216ENST00000570989 TRPC5Q9UL62 973 aaPredicted RBP16.72■□□□□ 0.27
ITGA3-216ENST00000570989 DOT1LQ8TEK3 1739 aa16.72■□□□□ 0.27
ITGA3-216ENST00000570989 TMEM232C9JQI7 657 aa16.72■□□□□ 0.27
ITGA3-216ENST00000570989 OAS2P29728 719 aaKnown RBP16.72■□□□□ 0.27
ITGA3-216ENST00000570989 PTPN21Q16825 1174 aa16.72■□□□□ 0.27
ITGA3-216ENST00000570989 MUM1L1Q5H9M0 696 aa16.72■□□□□ 0.27
ITGA3-216ENST00000570989 ZMYM1Q5SVZ6 1142 aa16.72■□□□□ 0.27
ITGA3-216ENST00000570989 VSTM4Q8IW00 320 aa16.72■□□□□ 0.27
ITGA3-216ENST00000570989 TUBE1Q9UJT0 475 aa16.72■□□□□ 0.27
ITGA3-216ENST00000570989 DDX60Q8IY21 1712 aaKnown RBP16.71■□□□□ 0.27
ITGA3-216ENST00000570989 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
ITGA3-216ENST00000570989 CMA1P23946 247 aa16.71■□□□□ 0.27
ITGA3-216ENST00000570989 TEX35Q5T0J7 233 aa16.71■□□□□ 0.27
ITGA3-216ENST00000570989 FBXL16Q8N461 479 aa16.71■□□□□ 0.27
ITGA3-216ENST00000570989 FBXO18Q8NFZ0 1043 aa16.71■□□□□ 0.27
ITGA3-216ENST00000570989 WDR24Q96S15 920 aa16.71■□□□□ 0.27
ITGA3-216ENST00000570989 INTS13Q9NVM9 706 aa16.71■□□□□ 0.27
ITGA3-216ENST00000570989 GOLIM4O00461 696 aa16.71■□□□□ 0.26
ITGA3-216ENST00000570989 UBASH3AP57075 661 aa16.71■□□□□ 0.26
ITGA3-216ENST00000570989 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.26
ITGA3-216ENST00000570989 FCHSD1Q86WN1 690 aa16.71■□□□□ 0.26
ITGA3-216ENST00000570989 HOMEZQ8IX15 550 aa16.71■□□□□ 0.26
ITGA3-216ENST00000570989 TXLNBQ8N3L3 684 aa16.71■□□□□ 0.26
ITGA3-216ENST00000570989 C8orf76Q96K31 380 aa16.71■□□□□ 0.26
ITGA3-216ENST00000570989 TEX13AQ9BXU3 409 aaPredicted RBP16.71■□□□□ 0.26
ITGA3-216ENST00000570989 CWC25Q9NXE8 425 aaPredicted RBP16.71■□□□□ 0.26
ITGA3-216ENST00000570989 CCDC9Q9Y3X0 531 aaKnown RBP16.71■□□□□ 0.26
ITGA3-216ENST00000570989 MAST3O60307 1309 aa16.71■□□□□ 0.26
ITGA3-216ENST00000570989 SPATA31A1Q5TZJ5 1347 aa16.71■□□□□ 0.26
ITGA3-216ENST00000570989 TPM1P09493 284 aa16.7■□□□□ 0.26
ITGA3-216ENST00000570989 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
ITGA3-216ENST00000570989 RSRC2Q7L4I2 434 aaKnown RBP16.7■□□□□ 0.26
ITGA3-216ENST00000570989 GJD4Q96KN9 370 aaPredicted RBP16.7■□□□□ 0.26
ITGA3-216ENST00000570989 BCCIPQ9P287 314 aaKnown RBP eCLIP16.7■□□□□ 0.26
ITGA3-216ENST00000570989 PPP2R2CQ9Y2T4 447 aa16.7■□□□□ 0.26
ITGA3-216ENST00000570989 RXRBP28702 533 aa16.7■□□□□ 0.26
ITGA3-216ENST00000570989 VPS72Q15906 364 aa16.7■□□□□ 0.26
ITGA3-216ENST00000570989 ANO1Q5XXA6 986 aa16.7■□□□□ 0.26
ITGA3-216ENST00000570989 BRAPQ7Z569 592 aa16.7■□□□□ 0.26
ITGA3-216ENST00000570989 SECISBP2LQ93073 1101 aaKnown RBP16.7■□□□□ 0.26
ITGA3-216ENST00000570989 HPS5Q9UPZ3 1129 aa16.7■□□□□ 0.26
ITGA3-216ENST00000570989 H7C1W4 665 aa16.69■□□□□ 0.26
ITGA3-216ENST00000570989 MYL5Q02045 173 aa16.69■□□□□ 0.26
ITGA3-216ENST00000570989 SMC1AQ14683 1233 aaKnown RBP16.69■□□□□ 0.26
ITGA3-216ENST00000570989 MPHOSPH8Q99549 860 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms