RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 ERO1BQ86YB8 467 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 FAM151AQ8WW52 585 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 MEIS3Q99687 375 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 EFCC1Q9HA90 598 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 COPRSQ9NQ92 184 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 AK9Q5TCS8 1911 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 TAF1CQ15572 869 aaPredicted RBP18.41■□□□□ 0.54
NDE1-203ENST00000570727 HOOK2Q96ED9 719 aa18.41■□□□□ 0.54
NDE1-203ENST00000570727 ZFYVE28Q9HCC9 887 aa18.41■□□□□ 0.54
NDE1-203ENST00000570727 RPAP1Q9BWH6 1393 aaPredicted RBP18.41■□□□□ 0.54
NDE1-203ENST00000570727 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
NDE1-203ENST00000570727 IRF6O14896 467 aa18.4■□□□□ 0.54
NDE1-203ENST00000570727 ZBTB22O15209 634 aa18.4■□□□□ 0.54
NDE1-203ENST00000570727 ADORA1P30542 326 aa18.4■□□□□ 0.54
NDE1-203ENST00000570727 NFIAQ12857 509 aa18.4■□□□□ 0.54
NDE1-203ENST00000570727 INTS3Q68E01 1043 aaKnown RBP18.4■□□□□ 0.54
NDE1-203ENST00000570727 ARHGAP45Q92619 1136 aa18.4■□□□□ 0.54
NDE1-203ENST00000570727 GNL3LQ9NVN8 582 aaKnown RBP18.4■□□□□ 0.54
NDE1-203ENST00000570727 ZNF112Q9UJU3 913 aa18.4■□□□□ 0.54
NDE1-203ENST00000570727 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
NDE1-203ENST00000570727 SALL1Q9NSC2 1324 aa18.4■□□□□ 0.54
NDE1-203ENST00000570727 KIAA0100Q14667 2235 aaKnown RBP18.39■□□□□ 0.54
NDE1-203ENST00000570727 POTEFA5A3E0 1075 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 BTBD19C9JJ37 291 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 LDHBP07195 334 aaKnown RBP18.39■□□□□ 0.53
NDE1-203ENST00000570727 CETPP11597 493 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 INPP5BP32019 993 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 TIMM10P62072 90 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 TCP10Q12799 353 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 DCAF15Q66K64 600 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 CCDC102BQ68D86 513 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 ZNF341Q9BYN7 854 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 FAM198AQ9UFP1 575 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 DENND2AQ9ULE3 1009 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 MYH2Q9UKX2 1941 aa18.39■□□□□ 0.53
NDE1-203ENST00000570727 SEMA3EO15041 775 aa18.38■□□□□ 0.53
NDE1-203ENST00000570727 PPIL2Q13356 520 aa18.38■□□□□ 0.53
NDE1-203ENST00000570727 PRPF38BQ5VTL8 546 aaKnown RBP18.38■□□□□ 0.53
NDE1-203ENST00000570727 ZFPM1Q8IX07 1006 aa18.38■□□□□ 0.53
NDE1-203ENST00000570727 ARMC5Q96C12 935 aa18.38■□□□□ 0.53
NDE1-203ENST00000570727 USP40Q9NVE5 1235 aa18.38■□□□□ 0.53
NDE1-203ENST00000570727 PPATQ06203 517 aa18.37■□□□□ 0.53
NDE1-203ENST00000570727 SNAPC2Q13487 334 aa18.37■□□□□ 0.53
NDE1-203ENST00000570727 ZCCHC17Q9NP64 241 aaKnown RBP18.37■□□□□ 0.53
NDE1-203ENST00000570727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.37■□□□□ 0.53
NDE1-203ENST00000570727 TLR2O60603 784 aa18.36■□□□□ 0.53
NDE1-203ENST00000570727 GNAI3P08754 354 aa18.35■□□□□ 0.53
NDE1-203ENST00000570727 MTX1Q13505 466 aa18.35■□□□□ 0.53
NDE1-203ENST00000570727 RASGRF1Q13972 1273 aa18.35■□□□□ 0.53
NDE1-203ENST00000570727 TNNQ9UQP3 1299 aa18.35■□□□□ 0.53
NDE1-203ENST00000570727 RBBP6Q7Z6E9 1792 aaKnown RBP18.35■□□□□ 0.53
NDE1-203ENST00000570727 GAKO14976 1311 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 SRGAP3O43295 1099 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 TFCP2Q12800 502 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 MOGSQ13724 837 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 ARHGEF6Q15052 776 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.34■□□□□ 0.53
NDE1-203ENST00000570727 FAM163AQ96GL9 167 aaPredicted RBP18.34■□□□□ 0.53
NDE1-203ENST00000570727 XAGE2Q96GT9 111 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 IDI2Q9BXS1 227 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 ARHGAP39Q9C0H5 1083 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 KCNH4Q9UQ05 1017 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 PTCH2Q9Y6C5 1203 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 ZSWIM8A7E2V4 1837 aa18.34■□□□□ 0.53
NDE1-203ENST00000570727 A0A1B0GUL7 405 aa18.33■□□□□ 0.52
NDE1-203ENST00000570727 BCAR3O75815 825 aa18.33■□□□□ 0.52
NDE1-203ENST00000570727 EN2P19622 333 aaPredicted RBP18.33■□□□□ 0.52
NDE1-203ENST00000570727 NOL9Q5SY16 702 aaKnown RBP18.33■□□□□ 0.52
NDE1-203ENST00000570727 C17orf99Q6UX52 265 aa18.33■□□□□ 0.52
NDE1-203ENST00000570727 SH3BP5LQ7L8J4 393 aa18.33■□□□□ 0.52
NDE1-203ENST00000570727 ZGPATQ8N5A5 531 aaKnown RBP18.33■□□□□ 0.52
NDE1-203ENST00000570727 ATRNL1Q5VV63 1379 aa18.32■□□□□ 0.52
NDE1-203ENST00000570727 PDS5AQ29RF7 1337 aaKnown RBP18.32■□□□□ 0.52
NDE1-203ENST00000570727 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
NDE1-203ENST00000570727 WDHD1O75717 1129 aaPredicted RBP18.32■□□□□ 0.52
NDE1-203ENST00000570727 TRIM27P14373 513 aa18.32■□□□□ 0.52
NDE1-203ENST00000570727 RGS3P49796 1198 aa18.32■□□□□ 0.52
NDE1-203ENST00000570727 LACTBP83111 547 aaPredicted RBP18.32■□□□□ 0.52
NDE1-203ENST00000570727 ZNF333Q96JL9 665 aa18.32■□□□□ 0.52
NDE1-203ENST00000570727 ABCF2Q9UG63 623 aa18.32■□□□□ 0.52
NDE1-203ENST00000570727 AKAP2Q9Y2D5 859 aa18.32■□□□□ 0.52
NDE1-203ENST00000570727 IPO8O15397 1037 aaKnown RBP18.31■□□□□ 0.52
NDE1-203ENST00000570727 ENTPD3O75355 529 aa18.31■□□□□ 0.52
NDE1-203ENST00000570727 MAP3K10Q02779 954 aa18.31■□□□□ 0.52
NDE1-203ENST00000570727 ANKRD23Q86SG2 305 aa18.31■□□□□ 0.52
NDE1-203ENST00000570727 ZNF384Q8TF68 577 aa18.31■□□□□ 0.52
NDE1-203ENST00000570727 RFX7Q2KHR2 1363 aa18.3■□□□□ 0.52
NDE1-203ENST00000570727 PDHXO00330 501 aa18.3■□□□□ 0.52
NDE1-203ENST00000570727 SLURP2P0DP57 97 aa18.3■□□□□ 0.52
NDE1-203ENST00000570727 CTGFP29279 349 aa18.3■□□□□ 0.52
NDE1-203ENST00000570727 ATF7IPQ6VMQ6 1270 aa18.3■□□□□ 0.52
NDE1-203ENST00000570727 DZIP1Q86YF9 867 aaKnown RBP18.3■□□□□ 0.52
NDE1-203ENST00000570727 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
NDE1-203ENST00000570727 CPA4Q9UI42 421 aa18.3■□□□□ 0.52
NDE1-203ENST00000570727 DOCK2Q92608 1830 aa18.29■□□□□ 0.52
NDE1-203ENST00000570727 PNMA6EA0A0J9YXQ4 647 aa18.29■□□□□ 0.52
NDE1-203ENST00000570727 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
NDE1-203ENST00000570727 CXCL11O14625 94 aa18.29■□□□□ 0.52
NDE1-203ENST00000570727 GNAI2P04899 355 aa18.29■□□□□ 0.52
NDE1-203ENST00000570727 MECOMQ03112 1051 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms