RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 USPL1Q5W0Q7 1092 aa8.7□□□□□ -1.02
THUMPD1-205ENST00000570231 CC2D2BQ6DHV5 1058 aa8.7□□□□□ -1.02
THUMPD1-205ENST00000570231 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
THUMPD1-205ENST00000570231 BICDL1Q6ZP65 573 aa8.7□□□□□ -1.02
THUMPD1-205ENST00000570231 LINS1Q8NG48 757 aa8.7□□□□□ -1.02
THUMPD1-205ENST00000570231 TFCP2L1Q9NZI6 479 aa8.7□□□□□ -1.02
THUMPD1-205ENST00000570231 C4BP0C0L5 1744 aa8.7□□□□□ -1.02
THUMPD1-205ENST00000570231 EP400Q96L91 3159 aa8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 ZBTB7BO15156 539 aaPredicted RBP8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 ALDH1L1O75891 902 aa8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 GPC1P35052 558 aa8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 RFC4P35249 363 aa8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 RNF144AP50876 292 aaPredicted RBP8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 TRAPPC3LQ5T215 181 aa8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 ILDR2Q71H61 639 aa8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 CCDC136Q96JN2 1154 aa8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 PRM3Q9NNZ6 103 aa8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 STK32BQ9NY57 414 aa8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 C9orf78Q9NZ63 289 aaPredicted RBP8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 ATP10DQ9P241 1426 aa8.69□□□□□ -1.02
THUMPD1-205ENST00000570231 LY75O60449 1722 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 COL5A3P25940 1745 aaPredicted RBP8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 RNF225M0QZC1 329 aaPredicted RBP8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 MEN1O00255 615 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 UBTFL1P0CB47 393 aaPredicted RBP8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 TCIRG1Q13488 830 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 HSP90AB3PQ58FF7 597 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 UBE3BQ7Z3V4 1068 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 CYP2U1Q7Z449 544 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 NLRP3Q96P20 1036 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 CWC25Q9NXE8 425 aaPredicted RBP8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 PPP4R2Q9NY27 417 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 ZNF652Q9Y2D9 606 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 USP42Q9H9J4 1324 aaKnown RBP8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 ZNF831Q5JPB2 1677 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 RREB1Q92766 1687 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 KAT6BQ8WYB5 2073 aa8.68□□□□□ -1.02
THUMPD1-205ENST00000570231 ERVV-1B6SEH8 477 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 GRM8O00222 908 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 GNAI3P08754 354 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 NBPF7P0C2Y1 421 aaPredicted RBP8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 SSFA2P28290 1259 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 KRT76Q01546 638 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 GCKRQ14397 625 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 TBC1D9BQ66K14 1250 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 UBN2Q6ZU65 1347 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 PRICKLE2Q7Z3G6 844 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 KDF1Q8NAX2 398 aaPredicted RBP8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 GMCL1Q96IK5 515 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 ISCA1Q9BUE6 129 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 USP44Q9H0E7 712 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 CHMP4BQ9H444 224 aaKnown RBP8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 ZBTB40Q9NUA8 1239 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 NARFQ9UHQ1 456 aa8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 NIP7Q9Y221 180 aaKnown RBP eCLIP8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 LRRFIP2Q9Y608 721 aaKnown RBP8.67□□□□□ -1.02
THUMPD1-205ENST00000570231 PNPLA7Q6ZV29 1317 aa8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 GNAI2P04899 355 aa8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 ERVK-9P63128 1117 aa8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 SLC15A2Q16348 729 aa8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 ERICH6BQ5W0A0 696 aa8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 MSL1Q68DK7 614 aa8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 FOXR1Q6PIV2 292 aa8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 NLRP10Q86W26 655 aa8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 COL23A1Q86Y22 540 aaPredicted RBP8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 SVOPQ8N4V2 548 aa8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 SUCLG2Q96I99 432 aa8.66□□□□□ -1.02
THUMPD1-205ENST00000570231 NPHP1O15259 732 aa8.65□□□□□ -1.02
THUMPD1-205ENST00000570231 SUSD4Q5VX71 490 aa8.65□□□□□ -1.02
THUMPD1-205ENST00000570231 ZNF34Q8IZ26 560 aa8.65□□□□□ -1.02
THUMPD1-205ENST00000570231 SYNE4Q8N205 404 aa8.65□□□□□ -1.02
THUMPD1-205ENST00000570231 CCDC191Q8NCU4 936 aa8.65□□□□□ -1.02
THUMPD1-205ENST00000570231 FAM89AQ96GI7 184 aa8.65□□□□□ -1.02
THUMPD1-205ENST00000570231 TRMT112Q9UI30 125 aaKnown RBP8.65□□□□□ -1.02
THUMPD1-205ENST00000570231 CHMP3Q9Y3E7 222 aa8.65□□□□□ -1.02
THUMPD1-205ENST00000570231 PCDHB11Q9Y5F2 797 aa8.65□□□□□ -1.02
THUMPD1-205ENST00000570231 ARFGEF2Q9Y6D5 1785 aa8.65□□□□□ -1.02
THUMPD1-205ENST00000570231 A0A1W2PRU2 124 aa8.64□□□□□ -1.03
THUMPD1-205ENST00000570231 GYS1P13807 737 aa8.64□□□□□ -1.03
THUMPD1-205ENST00000570231 HMGB2P26583 209 aaKnown RBP8.64□□□□□ -1.03
THUMPD1-205ENST00000570231 KCNMA1Q12791 1236 aa8.64□□□□□ -1.03
THUMPD1-205ENST00000570231 CEP85Q6P2H3 762 aa8.64□□□□□ -1.03
THUMPD1-205ENST00000570231 CCDC85AQ96PX6 553 aaPredicted RBP8.64□□□□□ -1.03
THUMPD1-205ENST00000570231 UTP14AQ9BVJ6 771 aaKnown RBP8.64□□□□□ -1.03
THUMPD1-205ENST00000570231 BCL11AQ9H165 835 aa8.64□□□□□ -1.03
THUMPD1-205ENST00000570231 BICC1Q9H694 974 aaKnown RBP8.64□□□□□ -1.03
THUMPD1-205ENST00000570231 NUP188Q5SRE5 1749 aa8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 SCN7AQ01118 1682 aa8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 H7C1W4 665 aa8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 IRS4O14654 1257 aaPredicted RBP8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 NTSR2O95665 410 aa8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 IGHDP01880 384 aa8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 PCCAP05165 728 aaPredicted RBP8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 RHOQP17081 205 aa8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 GTF2E1P29083 439 aaPredicted RBP8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 AAMPQ13685 434 aa8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 NFIXQ14938 502 aa8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 PARP10Q53GL7 1025 aa8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 EPHA10Q5JZY3 1008 aa8.63□□□□□ -1.03
THUMPD1-205ENST00000570231 RNFT1Q5M7Z0 435 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms