RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, human

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-222	ENST00000570086	LCORL	Q8N3X6	602 aa		18.86	■□□□□ 0.61
CMC2-222	ENST00000570086	MAP4K1	Q92918	833 aa		18.86	■□□□□ 0.61
CMC2-222	ENST00000570086	ARMT1	Q9H993	441 aa		18.86	■□□□□ 0.61
CMC2-222	ENST00000570086	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
CMC2-222	ENST00000570086	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.86	■□□□□ 0.61
CMC2-222	ENST00000570086	HSPD1	P10809	573 aa	Known RBP	18.85	■□□□□ 0.61
CMC2-222	ENST00000570086	BTD	P43251	543 aa		18.85	■□□□□ 0.61
CMC2-222	ENST00000570086	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.85	■□□□□ 0.61
CMC2-222	ENST00000570086	LAMA4	Q16363	1823 aa		18.85	■□□□□ 0.61
CMC2-222	ENST00000570086	NAV1	Q8NEY1	1877 aa		18.84	■□□□□ 0.61
CMC2-222	ENST00000570086	ZMYM6	O95789	1325 aa		18.84	■□□□□ 0.61
CMC2-222	ENST00000570086	ZNF280A	P59817	542 aa	Predicted RBP	18.84	■□□□□ 0.61
CMC2-222	ENST00000570086	DYNLL1	P63167	89 aa	Known RBP	18.84	■□□□□ 0.61
CMC2-222	ENST00000570086	PTH1R	Q03431	593 aa		18.84	■□□□□ 0.61
CMC2-222	ENST00000570086	MTMR14	Q8NCE2	650 aa		18.84	■□□□□ 0.61
CMC2-222	ENST00000570086	GJA3	Q9Y6H8	435 aa		18.84	■□□□□ 0.61
CMC2-222	ENST00000570086		U3KPZ7	1027 aa	Predicted RBP	18.84	■□□□□ 0.61
CMC2-222	ENST00000570086	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.84	■□□□□ 0.61
CMC2-222	ENST00000570086	PATL2	C9JE40	543 aa	Known RBP	18.83	■□□□□ 0.6
CMC2-222	ENST00000570086	MCC	P23508	829 aa		18.83	■□□□□ 0.6
CMC2-222	ENST00000570086	GMPS	P49915	693 aa	Predicted RBP	18.83	■□□□□ 0.6
CMC2-222	ENST00000570086	ALX1	Q15699	326 aa		18.83	■□□□□ 0.6
CMC2-222	ENST00000570086	GIMAP6	Q6P9H5	292 aa		18.83	■□□□□ 0.6
CMC2-222	ENST00000570086	SLC4A4	Q9Y6R1	1079 aa		18.83	■□□□□ 0.6
CMC2-222	ENST00000570086	MYH1	P12882	1939 aa		18.82	■□□□□ 0.6
CMC2-222	ENST00000570086	RBM5	P52756	815 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
CMC2-222	ENST00000570086	CFAP100	Q494V2	611 aa		18.82	■□□□□ 0.6
CMC2-222	ENST00000570086	VPS53	Q5VIR6	699 aa		18.82	■□□□□ 0.6
CMC2-222	ENST00000570086	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.82	■□□□□ 0.6
CMC2-222	ENST00000570086	C22orf23	Q9BZE7	217 aa		18.82	■□□□□ 0.6
CMC2-222	ENST00000570086	NACAP1	Q9BZK3	213 aa		18.82	■□□□□ 0.6
CMC2-222	ENST00000570086	ATP8A2	Q9NTI2	1148 aa		18.82	■□□□□ 0.6
CMC2-222	ENST00000570086	CTNNA3	Q9UI47	895 aa		18.82	■□□□□ 0.6
CMC2-222	ENST00000570086	LAMB1	P07942	1786 aa		18.82	■□□□□ 0.6
CMC2-222	ENST00000570086	DDX60L	Q5H9U9	1706 aa	Known RBP	18.81	■□□□□ 0.6
CMC2-222	ENST00000570086	GSG1L2	A8MUP6	293 aa		18.81	■□□□□ 0.6
CMC2-222	ENST00000570086	FOXP2	O15409	715 aa		18.81	■□□□□ 0.6
CMC2-222	ENST00000570086	RHBDL3	P58872	404 aa		18.81	■□□□□ 0.6
CMC2-222	ENST00000570086	DLGAP5	Q15398	846 aa		18.81	■□□□□ 0.6
CMC2-222	ENST00000570086	DPY19L2	Q6NUT2	758 aa		18.81	■□□□□ 0.6
CMC2-222	ENST00000570086	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.81	■□□□□ 0.6
CMC2-222	ENST00000570086	TBC1D32	Q96NH3	1257 aa		18.81	■□□□□ 0.6
CMC2-222	ENST00000570086	RBM8A	Q9Y5S9	174 aa	Known RBP	18.81	■□□□□ 0.6
CMC2-222	ENST00000570086	SCN4A	P35499	1836 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	SPDYE2B	A6NHP3	402 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	APP	P05067	770 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	SPDYE6	P0CI01	402 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	HSPA4	P34932	840 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	RBM25	P49756	843 aa	Known RBP	18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	NECTIN1	Q15223	517 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	RNF20	Q5VTR2	975 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	MICALL2	Q8IY33	904 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	TEX11	Q8IYF3	940 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	IFNL3	Q8IZI9	196 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	DDRGK1	Q96HY6	314 aa		18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	ZBED3	Q96IU2	234 aa	Predicted RBP	18.8	■□□□□ 0.6
CMC2-222	ENST00000570086	CNOT7	Q9UIV1	285 aa	Known RBP	18.8	■□□□□ 0.6
CMC2-222	ENST00000570086		H7C1D1	291 aa		18.79	■□□□□ 0.6
CMC2-222	ENST00000570086	PRKAB2	O43741	272 aa		18.79	■□□□□ 0.6
CMC2-222	ENST00000570086	FGA	P02671	866 aa		18.79	■□□□□ 0.6
CMC2-222	ENST00000570086	CDC42EP5	Q6NZY7	148 aa		18.79	■□□□□ 0.6
CMC2-222	ENST00000570086	SDR42E1	Q8WUS8	393 aa		18.79	■□□□□ 0.6
CMC2-222	ENST00000570086	NAPB	Q9H115	298 aa		18.79	■□□□□ 0.6
CMC2-222	ENST00000570086	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.79	■□□□□ 0.6
CMC2-222	ENST00000570086	MYOZ2	Q9NPC6	264 aa		18.79	■□□□□ 0.6
CMC2-222	ENST00000570086	USP40	Q9NVE5	1235 aa		18.79	■□□□□ 0.6
CMC2-222	ENST00000570086	GPRC5D	Q9NZD1	345 aa		18.79	■□□□□ 0.6
CMC2-222	ENST00000570086	NPM3	O75607	178 aa	Known RBP	18.78	■□□□□ 0.6
CMC2-222	ENST00000570086	USP5	P45974	858 aa		18.78	■□□□□ 0.6
CMC2-222	ENST00000570086	ANAPC15	P60006	121 aa		18.78	■□□□□ 0.6
CMC2-222	ENST00000570086	KCNB2	Q92953	911 aa		18.78	■□□□□ 0.6
CMC2-222	ENST00000570086	L3MBTL3	Q96JM7	780 aa	Predicted RBP	18.78	■□□□□ 0.6
CMC2-222	ENST00000570086	PRMT6	Q96LA8	375 aa	Predicted RBP	18.78	■□□□□ 0.6
CMC2-222	ENST00000570086	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.78	■□□□□ 0.6
CMC2-222	ENST00000570086	SRCAP	Q6ZRS2	3230 aa		18.78	■□□□□ 0.6
CMC2-222	ENST00000570086	GLTPD2	A6NH11	291 aa		18.77	■□□□□ 0.6
CMC2-222	ENST00000570086	MYO1B	O43795	1136 aa		18.77	■□□□□ 0.6
CMC2-222	ENST00000570086	DDN	O94850	711 aa	Predicted RBP	18.77	■□□□□ 0.6
CMC2-222	ENST00000570086	TDO2	P48775	406 aa		18.77	■□□□□ 0.6
CMC2-222	ENST00000570086	IL17RA	Q96F46	866 aa		18.77	■□□□□ 0.6
CMC2-222	ENST00000570086	TMOD2	Q9NZR1	351 aa		18.77	■□□□□ 0.6
CMC2-222	ENST00000570086	MKRN1	Q9UHC7	482 aa	Known RBP	18.77	■□□□□ 0.6
CMC2-222	ENST00000570086	WDR90	Q96KV7	1748 aa		18.77	■□□□□ 0.59
CMC2-222	ENST00000570086	SLC27A2	O14975	620 aa		18.76	■□□□□ 0.59
CMC2-222	ENST00000570086	WDHD1	O75717	1129 aa	Predicted RBP	18.76	■□□□□ 0.59
CMC2-222	ENST00000570086	ZKSCAN1	P17029	563 aa	Predicted RBP	18.76	■□□□□ 0.59
CMC2-222	ENST00000570086	LMOD1	P29536	600 aa	Predicted RBP	18.76	■□□□□ 0.59
CMC2-222	ENST00000570086	IMMT	Q16891	758 aa	Known RBP	18.76	■□□□□ 0.59
CMC2-222	ENST00000570086	CREB3L3	Q68CJ9	461 aa		18.76	■□□□□ 0.59
CMC2-222	ENST00000570086	TGFBRAP1	Q8WUH2	860 aa		18.76	■□□□□ 0.59
CMC2-222	ENST00000570086	IDI2	Q9BXS1	227 aa		18.76	■□□□□ 0.59
CMC2-222	ENST00000570086	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.76	■□□□□ 0.59
CMC2-222	ENST00000570086	PCDHAC2	Q9Y5I4	1007 aa		18.76	■□□□□ 0.59
CMC2-222	ENST00000570086	FLT1	P17948	1338 aa		18.75	■□□□□ 0.59
CMC2-222	ENST00000570086	SHTN1	A0MZ66	631 aa		18.75	■□□□□ 0.59
CMC2-222	ENST00000570086	TSGA10IP	Q3SY00	556 aa		18.75	■□□□□ 0.59
CMC2-222	ENST00000570086	SPDYE2	Q495Y8	402 aa		18.75	■□□□□ 0.59
CMC2-222	ENST00000570086	SBK1	Q52WX2	424 aa		18.75	■□□□□ 0.59
CMC2-222	ENST00000570086	FKBP1C	Q5VVH2	108 aa		18.75	■□□□□ 0.59
CMC2-222	ENST00000570086	TDRD3	Q9H7E2	651 aa	Known RBP	18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms