RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 PPP4R2Q9NY27 417 aa5.68□□□□□ -1.5
UBR1-211ENST00000569971 PRR19A6NJB7 356 aa5.67□□□□□ -1.5
UBR1-211ENST00000569971 H3BRJ5 948 aa5.67□□□□□ -1.5
UBR1-211ENST00000569971 EIF4EBP3O60516 100 aaPredicted RBP5.67□□□□□ -1.5
UBR1-211ENST00000569971 EDN3P14138 238 aa5.67□□□□□ -1.5
UBR1-211ENST00000569971 ST13P50502 369 aaKnown RBP5.67□□□□□ -1.5
UBR1-211ENST00000569971 ATP11AP98196 1134 aa5.67□□□□□ -1.5
UBR1-211ENST00000569971 GNL2Q13823 731 aaKnown RBP5.67□□□□□ -1.5
UBR1-211ENST00000569971 FAM20CQ8IXL6 584 aa5.67□□□□□ -1.5
UBR1-211ENST00000569971 GLIS3Q8NEA6 775 aa5.67□□□□□ -1.5
UBR1-211ENST00000569971 RNF208Q9H0X6 261 aa5.67□□□□□ -1.5
UBR1-211ENST00000569971 SEC31BQ9NQW1 1179 aa5.67□□□□□ -1.5
UBR1-211ENST00000569971 SALL4Q9UJQ4 1053 aa5.67□□□□□ -1.5
UBR1-211ENST00000569971 INPP5FQ9Y2H2 1132 aa5.67□□□□□ -1.5
UBR1-211ENST00000569971 WNT11O96014 354 aa5.66□□□□□ -1.5
UBR1-211ENST00000569971 DNAJA1P31689 397 aaKnown RBP5.66□□□□□ -1.5
UBR1-211ENST00000569971 FCGRTP55899 365 aa5.66□□□□□ -1.5
UBR1-211ENST00000569971 COL13A1Q5TAT6 717 aaPredicted RBP5.66□□□□□ -1.5
UBR1-211ENST00000569971 TRIM42Q8IWZ5 723 aa5.66□□□□□ -1.5
UBR1-211ENST00000569971 CEP120Q8N960 986 aa5.66□□□□□ -1.5
UBR1-211ENST00000569971 C3orf58Q8NDZ4 430 aa5.66□□□□□ -1.5
UBR1-211ENST00000569971 DHX38Q92620 1227 aaKnown RBP5.66□□□□□ -1.5
UBR1-211ENST00000569971 RNF114Q9Y508 228 aa5.66□□□□□ -1.5
UBR1-211ENST00000569971 MEGF11A6BM72 1044 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 ACPPP15309 386 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 ATP2B1P20020 1258 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 EPHA1P21709 976 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 GSTT1P30711 240 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 ERMP1Q7Z2K6 904 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 GIMAP7Q8NHV1 300 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 LACRTQ9GZZ8 138 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 RASSF4Q9H2L5 321 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 KCNK4Q9NYG8 393 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 TTF2Q9UNY4 1162 aaKnown RBP5.65□□□□□ -1.5
UBR1-211ENST00000569971 TRAK1Q9UPV9 953 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 AKAP2Q9Y2D5 859 aa5.65□□□□□ -1.5
UBR1-211ENST00000569971 TMEM238LA0A1B0GVL6 79 aa5.64□□□□□ -1.51
UBR1-211ENST00000569971 HMX2A2RU54 273 aa5.64□□□□□ -1.51
UBR1-211ENST00000569971 SART1O43290 800 aaKnown RBP5.64□□□□□ -1.51
UBR1-211ENST00000569971 ADAM11O75078 769 aa5.64□□□□□ -1.51
UBR1-211ENST00000569971 TRPA1O75762 1119 aa5.64□□□□□ -1.51
UBR1-211ENST00000569971 GTF2F1P35269 517 aaKnown RBP eCLIP5.64□□□□□ -1.51
UBR1-211ENST00000569971 ARL4DP49703 201 aa5.64□□□□□ -1.51
UBR1-211ENST00000569971 ARID5AQ03989 594 aa5.64□□□□□ -1.51
UBR1-211ENST00000569971 GMLQ99445 158 aa5.64□□□□□ -1.51
UBR1-211ENST00000569971 DNAJC2Q99543 621 aaKnown RBP5.64□□□□□ -1.51
UBR1-211ENST00000569971 OSMRQ99650 979 aa5.64□□□□□ -1.51
UBR1-211ENST00000569971 KBTBD4Q9NVX7 518 aa5.64□□□□□ -1.51
UBR1-211ENST00000569971 ZCCHC6Q5VYS8 1495 aaKnown RBP5.64□□□□□ -1.51
UBR1-211ENST00000569971 F6X3S4 739 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 PAK2Q13177 524 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 TXNDC11Q6PKC3 985 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 BEND4Q6ZU67 534 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 DPH6Q7L8W6 267 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 VPS37DQ86XT2 251 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 SHKBP1Q8TBC3 707 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 TCF12Q99081 682 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 ZKSCAN3Q9BRR0 538 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 TRIM56Q9BRZ2 755 aaKnown RBP5.63□□□□□ -1.51
UBR1-211ENST00000569971 RSRP1Q9BUV0 290 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 NOC4LQ9BVI4 516 aaKnown RBP5.63□□□□□ -1.51
UBR1-211ENST00000569971 LIN7BQ9HAP6 207 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 ABCB6Q9NP58 842 aa5.63□□□□□ -1.51
UBR1-211ENST00000569971 MINDY4BA8MYZ0 360 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 FBXO24O75426 580 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 BMP3P12645 472 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 CCDC85BQ15834 202 aaPredicted RBP5.62□□□□□ -1.51
UBR1-211ENST00000569971 SPRED3Q2MJR0 410 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 PRPF40BQ6NWY9 871 aaKnown RBP5.62□□□□□ -1.51
UBR1-211ENST00000569971 FDX2Q6P4F2 183 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 DTHD1Q6ZMT9 781 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 RELL1Q8IUW5 271 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 CCNJLQ8IV13 435 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 UBASH3BQ8TF42 649 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 POP1Q99575 1024 aaKnown RBP5.62□□□□□ -1.51
UBR1-211ENST00000569971 CARD10Q9BWT7 1032 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 SUGCTQ9HAC7 445 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 PIM2Q9P1W9 311 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 ADGRE2Q9UHX3 823 aa5.62□□□□□ -1.51
UBR1-211ENST00000569971 METTL12A8MUP2 240 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 PDE2AO00408 941 aaPredicted RBP5.61□□□□□ -1.51
UBR1-211ENST00000569971 ADAMTS4O75173 837 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 PRNPP04156 253 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 XRCC5P13010 732 aaKnown RBP5.61□□□□□ -1.51
UBR1-211ENST00000569971 GRIA4P48058 902 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 PREPP48147 710 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 GJA8P48165 433 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 MAP3K11Q16584 847 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 FAM177A1Q8N128 213 aaPredicted RBP5.61□□□□□ -1.51
UBR1-211ENST00000569971 KLHDC7BQ96G42 594 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 HHIPQ96QV1 700 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 METTL22Q9BUU2 404 aaPredicted RBP5.61□□□□□ -1.51
UBR1-211ENST00000569971 RUSC1Q9BVN2 902 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 KCNF1Q9H3M0 494 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 SOX17Q9H6I2 414 aaPredicted RBP5.61□□□□□ -1.51
UBR1-211ENST00000569971 DZANK1Q9NVP4 752 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 ADAMTS1Q9UHI8 967 aa5.61□□□□□ -1.51
UBR1-211ENST00000569971 NFKBIEO00221 500 aa5.6□□□□□ -1.51
UBR1-211ENST00000569971 GAS2O43903 313 aaKnown RBP5.6□□□□□ -1.51
UBR1-211ENST00000569971 GBP2P32456 591 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms