RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 DHX16O60231 1041 aaKnown RBP6.33□□□□□ -1.4
SF3B3-213ENST00000569687 CTDNEP1O95476 244 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 RPS8P62241 208 aaKnown RBP6.33□□□□□ -1.4
SF3B3-213ENST00000569687 KRT85P78386 507 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 FGD1P98174 961 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 DNM1Q05193 864 aaKnown RBP6.33□□□□□ -1.4
SF3B3-213ENST00000569687 CCDC173Q0VFZ6 552 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 RASGRF1Q13972 1273 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 UVSSAQ2YD98 709 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 HS1BP3Q53T59 392 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 CCDC183Q5T5S1 534 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 POTEAQ6S8J7 498 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 PI16Q6UXB8 463 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 TPTE2Q6XPS3 522 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 FBXO33Q7Z6M2 555 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 ANKRD18AQ8IVF6 992 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 PIP4P2Q8N4L2 257 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 NSUN7Q8NE18 718 aaKnown RBP6.33□□□□□ -1.4
SF3B3-213ENST00000569687 HELBQ8NG08 1087 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-213ENST00000569687 DDX12PQ92771 950 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 NLRP3Q96P20 1036 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 SETDB2Q96T68 719 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 REPIN1Q9BWE0 567 aaKnown RBP6.33□□□□□ -1.4
SF3B3-213ENST00000569687 ANKRD2Q9GZV1 360 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 RBSNQ9H1K0 784 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 RBM27Q9P2N5 1060 aaKnown RBP6.33□□□□□ -1.4
SF3B3-213ENST00000569687 CCNL1Q9UK58 526 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-213ENST00000569687 RCOR1Q9UKL0 485 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 MINPP1Q9UNW1 487 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 AKAP11Q9UKA4 1901 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 SALL1Q9NSC2 1324 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 VPS37CA5D8V6 355 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-213ENST00000569687 C2orf72A6NCS6 295 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 PRC1O43663 620 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 JAK2O60674 1132 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 ZPR1O75312 459 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 IDH1O75874 414 aaKnown RBP6.32□□□□□ -1.4
SF3B3-213ENST00000569687 TRIM37O94972 964 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 TM4SF1P30408 202 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 ADD1P35611 737 aaKnown RBP6.32□□□□□ -1.4
SF3B3-213ENST00000569687 LIFRP42702 1097 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 PTGER2P43116 358 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 NASPP49321 788 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-213ENST00000569687 BCAMP50895 628 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 KCNQ4P56696 695 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 ANTXR2P58335 489 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 APOBRQ0VD83 1088 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 TRDNQ13061 729 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 RESTQ13127 1097 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 STK3Q13188 491 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 TBC1D9BQ66K14 1250 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 CDC37L1Q7L3B6 337 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 SGMS1Q86VZ5 419 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 IFNL3Q8IZI9 196 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 FAM184AQ8NB25 1140 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 IGDCC4Q8TDY8 1250 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 UPF1Q92900 1129 aaKnown RBP eCLIP6.32□□□□□ -1.4
SF3B3-213ENST00000569687 PDLIM2Q96JY6 352 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 TMEM87BQ96K49 555 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 PANK2Q9BZ23 570 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 NBPF3Q9H094 633 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 CFAP45Q9UL16 551 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 WWC3Q9ULE0 1092 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 HPS5Q9UPZ3 1129 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 RTCBQ9Y3I0 505 aaKnown RBP6.32□□□□□ -1.4
SF3B3-213ENST00000569687 KAT6BQ8WYB5 2073 aa6.32□□□□□ -1.4
SF3B3-213ENST00000569687 CARMIL3Q8ND23 1372 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 BCORQ6W2J9 1755 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 C4BP0C0L5 1744 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 MYH3P11055 1940 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 SCN7AQ01118 1682 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 SYCE3A1L190 88 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 FAM177BA6PVY3 158 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 GSG1L2A8MUP6 293 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 H3BQV1 296 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 FGRP09769 529 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 FDPSP14324 419 aaKnown RBP6.31□□□□□ -1.4
SF3B3-213ENST00000569687 TIE1P35590 1138 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 PTGDRQ13258 359 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 CAVIN4Q5BKX8 364 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 SH3D19Q5HYK7 790 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 SLC27A3Q5K4L6 730 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 TRAPPC3LQ5T215 181 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 IFFO2Q5TF58 517 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 GIMAP6Q6P9H5 292 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 C3orf67Q6ZVT6 689 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 RALYLQ86SE5 291 aaKnown RBP6.31□□□□□ -1.4
SF3B3-213ENST00000569687 TTC6Q86TZ1 520 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 TMTC2Q8N394 836 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 MAGEB6Q8N7X4 407 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 LEO1Q8WVC0 666 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-213ENST00000569687 ANP32BQ92688 251 aaKnown RBP6.31□□□□□ -1.4
SF3B3-213ENST00000569687 AIDAQ96BJ3 306 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 FAM84BQ96KN1 310 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-213ENST00000569687 FUCA2Q9BTY2 467 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 LRRC2Q9BYS8 371 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 NACAP1Q9BZK3 213 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 TSPY26PQ9H489 355 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 CNNM2Q9H8M5 875 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 GDPD2Q9HCC8 539 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms