RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 DIXDC1Q155Q3 683 aa20.55■□□□□ 0.88
CDR2-207ENST00000569045 FTSJ3Q8IY81 847 aaKnown RBP20.55■□□□□ 0.88
CDR2-207ENST00000569045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.55■□□□□ 0.88
CDR2-207ENST00000569045 FAM151AQ8WW52 585 aa20.55■□□□□ 0.88
CDR2-207ENST00000569045 NEUROD6Q96NK8 337 aa20.55■□□□□ 0.88
CDR2-207ENST00000569045 DAGLAQ9Y4D2 1042 aa20.55■□□□□ 0.88
CDR2-207ENST00000569045 RPAP1Q9BWH6 1393 aaPredicted RBP20.55■□□□□ 0.88
CDR2-207ENST00000569045 IGF2BP3O00425 579 aaKnown RBP eCLIP20.54■□□□□ 0.88
CDR2-207ENST00000569045 GJA5P36382 358 aa20.54■□□□□ 0.88
CDR2-207ENST00000569045 DZIP1Q86YF9 867 aaKnown RBP20.54■□□□□ 0.88
CDR2-207ENST00000569045 XAGE2Q96GT9 111 aa20.54■□□□□ 0.88
CDR2-207ENST00000569045 WRNIP1Q96S55 665 aa20.54■□□□□ 0.88
CDR2-207ENST00000569045 USP40Q9NVE5 1235 aa20.54■□□□□ 0.88
CDR2-207ENST00000569045 PDS5AQ29RF7 1337 aaKnown RBP20.53■□□□□ 0.88
CDR2-207ENST00000569045 TESPA1A2RU30 521 aaPredicted RBP20.53■□□□□ 0.88
CDR2-207ENST00000569045 CDC42EP5Q6NZY7 148 aa20.53■□□□□ 0.88
CDR2-207ENST00000569045 TMEM57Q8N5G2 664 aa20.53■□□□□ 0.88
CDR2-207ENST00000569045 OTUD5Q96G74 571 aa20.53■□□□□ 0.88
CDR2-207ENST00000569045 ZNF341Q9BYN7 854 aa20.53■□□□□ 0.88
CDR2-207ENST00000569045 ABCF2Q9UG63 623 aa20.53■□□□□ 0.88
CDR2-207ENST00000569045 OTOFQ9HC10 1997 aa20.53■□□□□ 0.88
CDR2-207ENST00000569045 RASGRF1Q13972 1273 aa20.52■□□□□ 0.88
CDR2-207ENST00000569045 FBXO46Q6PJ61 603 aaPredicted RBP20.52■□□□□ 0.88
CDR2-207ENST00000569045 ERO1BQ86YB8 467 aa20.52■□□□□ 0.88
CDR2-207ENST00000569045 ERO1AQ96HE7 468 aa20.52■□□□□ 0.88
CDR2-207ENST00000569045 R3HDMLQ9H3Y0 253 aa20.52■□□□□ 0.88
CDR2-207ENST00000569045 HPS5Q9UPZ3 1129 aa20.52■□□□□ 0.88
CDR2-207ENST00000569045 TNNQ9UQP3 1299 aa20.52■□□□□ 0.88
CDR2-207ENST00000569045 LAMB1P07942 1786 aa20.51■□□□□ 0.87
CDR2-207ENST00000569045 CCL15-CCL14A0A0B4J2E2 113 aa20.51■□□□□ 0.87
CDR2-207ENST00000569045 SPDYE5A6NIY4 337 aa20.51■□□□□ 0.87
CDR2-207ENST00000569045 TCP10Q12799 353 aa20.51■□□□□ 0.87
CDR2-207ENST00000569045 CCL15Q16663 113 aa20.51■□□□□ 0.87
CDR2-207ENST00000569045 CRHR2Q13324 411 aa20.5■□□□□ 0.87
CDR2-207ENST00000569045 OS9Q13438 667 aaPredicted RBP20.5■□□□□ 0.87
CDR2-207ENST00000569045 ZKSCAN4Q969J2 545 aaPredicted RBP20.5■□□□□ 0.87
CDR2-207ENST00000569045 AK9Q5TCS8 1911 aa20.5■□□□□ 0.87
CDR2-207ENST00000569045 CETPP11597 493 aa20.49■□□□□ 0.87
CDR2-207ENST00000569045 SNAPC2Q13487 334 aa20.49■□□□□ 0.87
CDR2-207ENST00000569045 ARHGEF6Q15052 776 aa20.49■□□□□ 0.87
CDR2-207ENST00000569045 ERICH6Q7L0X2 663 aa20.49■□□□□ 0.87
CDR2-207ENST00000569045 MIGA2Q7L4E1 593 aa20.49■□□□□ 0.87
CDR2-207ENST00000569045 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
CDR2-207ENST00000569045 MS4A4AQ96JQ5 239 aa20.49■□□□□ 0.87
CDR2-207ENST00000569045 PTPN18Q99952 460 aa20.49■□□□□ 0.87
CDR2-207ENST00000569045 ZFYVE28Q9HCC9 887 aa20.49■□□□□ 0.87
CDR2-207ENST00000569045 SNCAIPQ9Y6H5 919 aa20.49■□□□□ 0.87
CDR2-207ENST00000569045 PNMA6EA0A0J9YXQ4 647 aa20.48■□□□□ 0.87
CDR2-207ENST00000569045 SOX10P56693 466 aa20.48■□□□□ 0.87
CDR2-207ENST00000569045 GSTO1P78417 241 aa20.48■□□□□ 0.87
CDR2-207ENST00000569045 PPIL2Q13356 520 aa20.48■□□□□ 0.87
CDR2-207ENST00000569045 TAF1CQ15572 869 aaPredicted RBP20.48■□□□□ 0.87
CDR2-207ENST00000569045 ITPRIPQ8IWB1 547 aa20.48■□□□□ 0.87
CDR2-207ENST00000569045 BRI3BPQ8WY22 251 aa20.48■□□□□ 0.87
CDR2-207ENST00000569045 TRIM17Q9Y577 477 aa20.48■□□□□ 0.87
CDR2-207ENST00000569045 ZBED9Q6R2W3 1325 aa20.48■□□□□ 0.87
CDR2-207ENST00000569045 ENTPD3O75355 529 aa20.47■□□□□ 0.87
CDR2-207ENST00000569045 UQCRFS1P1P0C7P4 283 aa20.47■□□□□ 0.87
CDR2-207ENST00000569045 SP3Q02447 781 aa20.47■□□□□ 0.87
CDR2-207ENST00000569045 PPATQ06203 517 aa20.47■□□□□ 0.87
CDR2-207ENST00000569045 NFIAQ12857 509 aa20.47■□□□□ 0.87
CDR2-207ENST00000569045 ZSCAN29Q8IWY8 852 aaPredicted RBP20.47■□□□□ 0.87
CDR2-207ENST00000569045 SPATA5Q8NB90 893 aa20.47■□□□□ 0.87
CDR2-207ENST00000569045 GAKO14976 1311 aa20.47■□□□□ 0.87
CDR2-207ENST00000569045 LDHCP07864 332 aa20.46■□□□□ 0.87
CDR2-207ENST00000569045 FAM163AQ96GL9 167 aaPredicted RBP20.46■□□□□ 0.87
CDR2-207ENST00000569045 IDI2Q9BXS1 227 aa20.46■□□□□ 0.87
CDR2-207ENST00000569045 ZCCHC17Q9NP64 241 aaKnown RBP20.46■□□□□ 0.87
CDR2-207ENST00000569045 FAM198AQ9UFP1 575 aa20.46■□□□□ 0.87
CDR2-207ENST00000569045 MYH2Q9UKX2 1941 aa20.46■□□□□ 0.87
CDR2-207ENST00000569045 RGS3P49796 1198 aa20.45■□□□□ 0.86
CDR2-207ENST00000569045 ATP8B2P98198 1209 aa20.45■□□□□ 0.86
CDR2-207ENST00000569045 HMG20BQ9P0W2 317 aa20.45■□□□□ 0.86
CDR2-207ENST00000569045 MROH7-TTC4A0A0A0MT08 1334 aa20.45■□□□□ 0.86
CDR2-207ENST00000569045 IRF6O14896 467 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 SURF6O75683 361 aaKnown RBP20.44■□□□□ 0.86
CDR2-207ENST00000569045 INPP5BP32019 993 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 BTDP43251 543 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 MECOMQ03112 1051 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 CCDC158Q5M9N0 1113 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 OTOP1Q7RTM1 612 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 CD99L2Q8TCZ2 262 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 EFCC1Q9HA90 598 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 GPR108Q9NPR9 543 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 RAI14Q9P0K7 980 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 ZNF112Q9UJU3 913 aa20.44■□□□□ 0.86
CDR2-207ENST00000569045 MAP4K4O95819 1239 aaPredicted RBP20.43■□□□□ 0.86
CDR2-207ENST00000569045 MS4A1P11836 297 aa20.43■□□□□ 0.86
CDR2-207ENST00000569045 ARID4AP29374 1257 aaPredicted RBP20.43■□□□□ 0.86
CDR2-207ENST00000569045 POLA2Q14181 598 aa20.43■□□□□ 0.86
CDR2-207ENST00000569045 TTC39AQ5SRH9 613 aa20.43■□□□□ 0.86
CDR2-207ENST00000569045 SSH3Q8TE77 659 aa20.43■□□□□ 0.86
CDR2-207ENST00000569045 NOL10Q9BSC4 688 aaKnown RBP20.43■□□□□ 0.86
CDR2-207ENST00000569045 LRP2BPQ9P2M1 347 aa20.43■□□□□ 0.86
CDR2-207ENST00000569045 PICALMQ13492 652 aa20.42■□□□□ 0.86
CDR2-207ENST00000569045 FAM43AQ8N2R8 423 aa20.42■□□□□ 0.86
CDR2-207ENST00000569045 C1orf115Q9H7X2 142 aa20.42■□□□□ 0.86
CDR2-207ENST00000569045 PICK1Q9NRD5 415 aa20.42■□□□□ 0.86
CDR2-207ENST00000569045 GPR75-ASB3A0A0A6YYF3 556 aa20.41■□□□□ 0.86
CDR2-207ENST00000569045 KIF22Q14807 665 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms