RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 DDX41Q9UJV9 622 aaKnown RBP9.28□□□□□ -0.92
CYLD-213ENST00000568744 TM4SF5O14894 197 aa9.27□□□□□ -0.93
CYLD-213ENST00000568744 COL8A1P27658 744 aa9.27□□□□□ -0.93
CYLD-213ENST00000568744 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.93
CYLD-213ENST00000568744 RACK1P63244 317 aaKnown RBP9.27□□□□□ -0.93
CYLD-213ENST00000568744 HNRNPUQ00839 825 aaKnown RBP eCLIP9.27□□□□□ -0.93
CYLD-213ENST00000568744 RAD51AP2Q09MP3 1159 aa9.27□□□□□ -0.93
CYLD-213ENST00000568744 CAMK2GQ13555 558 aaPredicted RBP9.27□□□□□ -0.93
CYLD-213ENST00000568744 HP1BP3Q5SSJ5 553 aaPredicted RBP9.27□□□□□ -0.93
CYLD-213ENST00000568744 PDZD3Q86UT5 571 aa9.27□□□□□ -0.93
CYLD-213ENST00000568744 MRPL18Q9H0U6 180 aaKnown RBP9.27□□□□□ -0.93
CYLD-213ENST00000568744 ACBD3Q9H3P7 528 aa9.27□□□□□ -0.93
CYLD-213ENST00000568744 ZNF252P-AS1Q0IIN9 211 aa9.26□□□□□ -0.93
CYLD-213ENST00000568744 DIEXFQ68CQ4 756 aaKnown RBP9.26□□□□□ -0.93
CYLD-213ENST00000568744 GOLM1Q8NBJ4 401 aa9.26□□□□□ -0.93
CYLD-213ENST00000568744 GPBAR1Q8TDU6 330 aa9.26□□□□□ -0.93
CYLD-213ENST00000568744 SPON2Q9BUD6 331 aa9.26□□□□□ -0.93
CYLD-213ENST00000568744 ADAMTS1Q9UHI8 967 aa9.26□□□□□ -0.93
CYLD-213ENST00000568744 DLGAP3O95886 979 aa9.25□□□□□ -0.93
CYLD-213ENST00000568744 LMNB2Q03252 620 aa9.25□□□□□ -0.93
CYLD-213ENST00000568744 KIAA0825Q8IV33 1275 aa9.25□□□□□ -0.93
CYLD-213ENST00000568744 AGGF1Q8N302 714 aaeCLIP9.25□□□□□ -0.93
CYLD-213ENST00000568744 ZNF296Q8WUU4 475 aaPredicted RBP9.25□□□□□ -0.93
CYLD-213ENST00000568744 RHOVQ96L33 236 aa9.25□□□□□ -0.93
CYLD-213ENST00000568744 CAPN10Q9HC96 672 aa9.25□□□□□ -0.93
CYLD-213ENST00000568744 PCDHA4Q9UN74 947 aa9.25□□□□□ -0.93
CYLD-213ENST00000568744 INPP5FQ9Y2H2 1132 aa9.25□□□□□ -0.93
CYLD-213ENST00000568744 TRIM37O94972 964 aa9.24□□□□□ -0.93
CYLD-213ENST00000568744 TNNI2P48788 182 aa9.24□□□□□ -0.93
CYLD-213ENST00000568744 AKAP4Q5JQC9 854 aa9.24□□□□□ -0.93
CYLD-213ENST00000568744 NUTM2GQ5VZR2 741 aa9.24□□□□□ -0.93
CYLD-213ENST00000568744 BNC2Q6ZN30 1099 aaPredicted RBP9.24□□□□□ -0.93
CYLD-213ENST00000568744 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
CYLD-213ENST00000568744 SUPT16HQ9Y5B9 1047 aaKnown RBP9.24□□□□□ -0.93
CYLD-213ENST00000568744 RNF225M0QZC1 329 aaPredicted RBP9.23□□□□□ -0.93
CYLD-213ENST00000568744 TLR3O15455 904 aaKnown RBP9.23□□□□□ -0.93
CYLD-213ENST00000568744 ZNF862O60290 1169 aa9.23□□□□□ -0.93
CYLD-213ENST00000568744 ALX3O95076 343 aa9.23□□□□□ -0.93
CYLD-213ENST00000568744 SELPP16109 830 aa9.23□□□□□ -0.93
CYLD-213ENST00000568744 EXOSC6Q5RKV6 272 aaKnown RBP9.23□□□□□ -0.93
CYLD-213ENST00000568744 FBXL19Q6PCT2 694 aa9.23□□□□□ -0.93
CYLD-213ENST00000568744 KIAA1211Q6ZU35 1233 aa9.23□□□□□ -0.93
CYLD-213ENST00000568744 TRIM42Q8IWZ5 723 aa9.23□□□□□ -0.93
CYLD-213ENST00000568744 WDR89Q96FK6 387 aaPredicted RBP9.23□□□□□ -0.93
CYLD-213ENST00000568744 RNF208Q9H0X6 261 aa9.23□□□□□ -0.93
CYLD-213ENST00000568744 KRT82Q9NSB4 513 aa9.23□□□□□ -0.93
CYLD-213ENST00000568744 BPNT1O95861 308 aa9.22□□□□□ -0.93
CYLD-213ENST00000568744 F13A1P00488 732 aa9.22□□□□□ -0.93
CYLD-213ENST00000568744 SLFN14P0C7P3 912 aa9.22□□□□□ -0.93
CYLD-213ENST00000568744 PTPN11Q06124 597 aaPredicted RBP9.22□□□□□ -0.93
CYLD-213ENST00000568744 PAK2Q13177 524 aa9.22□□□□□ -0.93
CYLD-213ENST00000568744 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.22□□□□□ -0.93
CYLD-213ENST00000568744 C9orf172C9J069 976 aa9.21□□□□□ -0.94
CYLD-213ENST00000568744 F8W735 103 aaPredicted RBP9.21□□□□□ -0.94
CYLD-213ENST00000568744 AOC2O75106 756 aa9.21□□□□□ -0.94
CYLD-213ENST00000568744 GLB1P16278 677 aa9.21□□□□□ -0.94
CYLD-213ENST00000568744 ZC3H6P61129 1189 aaKnown RBP9.21□□□□□ -0.94
CYLD-213ENST00000568744 FDX2Q6P4F2 183 aa9.21□□□□□ -0.94
CYLD-213ENST00000568744 C12orf50Q8NA57 414 aaPredicted RBP9.21□□□□□ -0.94
CYLD-213ENST00000568744 GAL3ST3Q96A11 431 aa9.21□□□□□ -0.94
CYLD-213ENST00000568744 ELMO3Q96BJ8 720 aa9.21□□□□□ -0.94
CYLD-213ENST00000568744 WDR18Q9BV38 432 aa9.21□□□□□ -0.94
CYLD-213ENST00000568744 AKTIPQ9H8T0 292 aa9.21□□□□□ -0.94
CYLD-213ENST00000568744 CYP4F12Q9HCS2 524 aa9.21□□□□□ -0.94
CYLD-213ENST00000568744 GNL2Q13823 731 aaKnown RBP9.2□□□□□ -0.94
CYLD-213ENST00000568744 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.2□□□□□ -0.94
CYLD-213ENST00000568744 LENG1Q96BZ8 264 aaPredicted RBP9.2□□□□□ -0.94
CYLD-213ENST00000568744 PICK1Q9NRD5 415 aa9.2□□□□□ -0.94
CYLD-213ENST00000568744 AP4E1Q9UPM8 1137 aa9.2□□□□□ -0.94
CYLD-213ENST00000568744 CSADQ9Y600 493 aa9.2□□□□□ -0.94
CYLD-213ENST00000568744 DCDC2CA8MYV0 355 aa9.19□□□□□ -0.94
CYLD-213ENST00000568744 DRD2P14416 443 aa9.19□□□□□ -0.94
CYLD-213ENST00000568744 GARTP22102 1010 aa9.19□□□□□ -0.94
CYLD-213ENST00000568744 IREB2P48200 963 aaKnown RBP9.19□□□□□ -0.94
CYLD-213ENST00000568744 NRG1Q02297 640 aaPredicted RBP9.19□□□□□ -0.94
CYLD-213ENST00000568744 APOBRQ0VD83 1088 aa9.19□□□□□ -0.94
CYLD-213ENST00000568744 NAALADL2Q58DX5 795 aa9.19□□□□□ -0.94
CYLD-213ENST00000568744 SCARA3Q6AZY7 606 aa9.19□□□□□ -0.94
CYLD-213ENST00000568744 FBXO27Q8NI29 283 aa9.19□□□□□ -0.94
CYLD-213ENST00000568744 GATAD2BQ8WXI9 593 aa9.19□□□□□ -0.94
CYLD-213ENST00000568744 TMPRSS13Q9BYE2 586 aa9.19□□□□□ -0.94
CYLD-213ENST00000568744 UBP1Q9NZI7 540 aa9.19□□□□□ -0.94
CYLD-213ENST00000568744 SART1O43290 800 aaKnown RBP9.18□□□□□ -0.94
CYLD-213ENST00000568744 CDK8P49336 464 aa9.18□□□□□ -0.94
CYLD-213ENST00000568744 KIF4BQ2VIQ3 1234 aa9.18□□□□□ -0.94
CYLD-213ENST00000568744 WIPI1Q5MNZ9 446 aaPredicted RBP9.18□□□□□ -0.94
CYLD-213ENST00000568744 FAM196AQ6ZSG2 479 aa9.18□□□□□ -0.94
CYLD-213ENST00000568744 CCDC84Q86UT8 332 aaPredicted RBP9.18□□□□□ -0.94
CYLD-213ENST00000568744 ALYREFQ86V81 257 aaKnown RBP9.18□□□□□ -0.94
CYLD-213ENST00000568744 TMEM130Q8N3G9 435 aa9.18□□□□□ -0.94
CYLD-213ENST00000568744 NKD1Q969G9 470 aa9.18□□□□□ -0.94
CYLD-213ENST00000568744 GPRASP2Q96D09 838 aa9.18□□□□□ -0.94
CYLD-213ENST00000568744 EAF1Q96JC9 268 aaPredicted RBP9.18□□□□□ -0.94
CYLD-213ENST00000568744 MEGF11A6BM72 1044 aa9.17□□□□□ -0.94
CYLD-213ENST00000568744 INPP5AQ14642 412 aa9.17□□□□□ -0.94
CYLD-213ENST00000568744 SEZ6Q53EL9 994 aa9.17□□□□□ -0.94
CYLD-213ENST00000568744 LRFN4Q6PJG9 635 aa9.17□□□□□ -0.94
CYLD-213ENST00000568744 DYMQ7RTS9 669 aa9.17□□□□□ -0.94
CYLD-213ENST00000568744 HDXQ7Z353 690 aa9.17□□□□□ -0.94
CYLD-213ENST00000568744 C12orf40Q86WS4 652 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms