RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 SLFN14P0C7P3 912 aa6.56□□□□□ -1.36
CDH1-211ENST00000567320 LIG1P18858 919 aa6.56□□□□□ -1.36
CDH1-211ENST00000567320 HNRNPUQ00839 825 aaKnown RBP eCLIP6.56□□□□□ -1.36
CDH1-211ENST00000567320 RETREG2Q8NC44 543 aa6.56□□□□□ -1.36
CDH1-211ENST00000567320 FLCNQ8NFG4 579 aa6.56□□□□□ -1.36
CDH1-211ENST00000567320 EPS8L3Q8TE67 593 aaKnown RBP6.56□□□□□ -1.36
CDH1-211ENST00000567320 KRTAP4-12Q9BQ66 201 aa6.56□□□□□ -1.36
CDH1-211ENST00000567320 DNAJC25Q9H1X3 360 aa6.56□□□□□ -1.36
CDH1-211ENST00000567320 ACSS3Q9H6R3 686 aa6.56□□□□□ -1.36
CDH1-211ENST00000567320 ABCB6Q9NP58 842 aa6.56□□□□□ -1.36
CDH1-211ENST00000567320 NLRP2Q9NX02 1062 aa6.56□□□□□ -1.36
CDH1-211ENST00000567320 BIN2Q9UBW5 565 aaPredicted RBP6.56□□□□□ -1.36
CDH1-211ENST00000567320 FCGRTP55899 365 aa6.55□□□□□ -1.36
CDH1-211ENST00000567320 DMRTB1Q96MA1 342 aa6.55□□□□□ -1.36
CDH1-211ENST00000567320 CSRNP1Q96S65 589 aa6.55□□□□□ -1.36
CDH1-211ENST00000567320 WDR18Q9BV38 432 aa6.55□□□□□ -1.36
CDH1-211ENST00000567320 GPN3Q9UHW5 284 aaPredicted RBP6.55□□□□□ -1.36
CDH1-211ENST00000567320 ADGRE2Q9UHX3 823 aa6.55□□□□□ -1.36
CDH1-211ENST00000567320 DYNC1LI2O43237 492 aaPredicted RBP6.54□□□□□ -1.36
CDH1-211ENST00000567320 PTPN12Q05209 780 aaKnown RBP6.54□□□□□ -1.36
CDH1-211ENST00000567320 PPP2R3AQ06190 1150 aa6.54□□□□□ -1.36
CDH1-211ENST00000567320 GRM2Q14416 872 aa6.54□□□□□ -1.36
CDH1-211ENST00000567320 TXNDC2Q86VQ3 553 aa6.54□□□□□ -1.36
CDH1-211ENST00000567320 ZC3H7BQ9UGR2 993 aaKnown RBP6.54□□□□□ -1.36
CDH1-211ENST00000567320 PPP1R9AQ9ULJ8 1098 aa6.54□□□□□ -1.36
CDH1-211ENST00000567320 RNGTTO60942 597 aaKnown RBP6.53□□□□□ -1.36
CDH1-211ENST00000567320 PRNPP04156 253 aa6.53□□□□□ -1.36
CDH1-211ENST00000567320 RPS26P11Q5JNZ5 115 aaPredicted RBP6.53□□□□□ -1.36
CDH1-211ENST00000567320 PRPF40BQ6NWY9 871 aaKnown RBP6.53□□□□□ -1.36
CDH1-211ENST00000567320 GATA6Q92908 595 aa6.53□□□□□ -1.36
CDH1-211ENST00000567320 KCNB2Q92953 911 aa6.53□□□□□ -1.36
CDH1-211ENST00000567320 WDR89Q96FK6 387 aaPredicted RBP6.53□□□□□ -1.36
CDH1-211ENST00000567320 FMNL2Q96PY5 1086 aa6.53□□□□□ -1.36
CDH1-211ENST00000567320 CCDC86Q9H6F5 360 aaKnown RBP6.53□□□□□ -1.36
CDH1-211ENST00000567320 ID3Q02535 119 aa6.52□□□□□ -1.37
CDH1-211ENST00000567320 FAAP100Q0VG06 881 aa6.52□□□□□ -1.37
CDH1-211ENST00000567320 CDK5R2Q13319 367 aa6.52□□□□□ -1.37
CDH1-211ENST00000567320 CYP27C1Q4G0S4 372 aa6.52□□□□□ -1.37
CDH1-211ENST00000567320 OGFOD3Q6PK18 319 aa6.52□□□□□ -1.37
CDH1-211ENST00000567320 AGBL5Q8NDL9 886 aa6.52□□□□□ -1.37
CDH1-211ENST00000567320 ATXN3LQ9H3M9 355 aa6.52□□□□□ -1.37
CDH1-211ENST00000567320 SSU72Q9NP77 194 aaKnown RBP6.52□□□□□ -1.37
CDH1-211ENST00000567320 C1GALT1Q9NS00 363 aa6.52□□□□□ -1.37
CDH1-211ENST00000567320 AKAP2Q9Y2D5 859 aa6.52□□□□□ -1.37
CDH1-211ENST00000567320 TMPRSS2O15393 492 aa6.51□□□□□ -1.37
CDH1-211ENST00000567320 GSTP1P09211 210 aaKnown RBP6.51□□□□□ -1.37
CDH1-211ENST00000567320 FAM87AP0C7U9 286 aa6.51□□□□□ -1.37
CDH1-211ENST00000567320 YBX3P16989 372 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDH1-211ENST00000567320 ARHGAP27Q6ZUM4 889 aa6.51□□□□□ -1.37
CDH1-211ENST00000567320 RBCK1Q9BYM8 510 aa6.51□□□□□ -1.37
CDH1-211ENST00000567320 TMEM39AQ9NV64 488 aa6.51□□□□□ -1.37
CDH1-211ENST00000567320 SLC5A6Q9Y289 635 aa6.51□□□□□ -1.37
CDH1-211ENST00000567320 BTBD11A6QL63 1104 aa6.5□□□□□ -1.37
CDH1-211ENST00000567320 HCLS1P14317 486 aaPredicted RBP6.5□□□□□ -1.37
CDH1-211ENST00000567320 PI16Q6UXB8 463 aa6.5□□□□□ -1.37
CDH1-211ENST00000567320 SMYD4Q8IYR2 804 aaPredicted RBP6.5□□□□□ -1.37
CDH1-211ENST00000567320 FANCD2OSQ96PS1 177 aa6.5□□□□□ -1.37
CDH1-211ENST00000567320 BCO2Q9BYV7 579 aa6.5□□□□□ -1.37
CDH1-211ENST00000567320 GSX1Q9H4S2 264 aaPredicted RBP6.5□□□□□ -1.37
CDH1-211ENST00000567320 CRIM1Q9NZV1 1036 aa6.5□□□□□ -1.37
CDH1-211ENST00000567320 SOWAHDA6NJG2 315 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 ZNF862O60290 1169 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 MAPK1P28482 360 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 TTLL4Q14679 1199 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 PLCL1Q15111 1095 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 SEZ6L2Q6UXD5 910 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 TMC7Q7Z402 723 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 GLIS3Q8NEA6 775 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 ALKBH8Q96BT7 664 aaKnown RBP6.49□□□□□ -1.37
CDH1-211ENST00000567320 ACSBG1Q96GR2 724 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 CBX8Q9HC52 389 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 SYNGAP1Q96PV0 1343 aa6.49□□□□□ -1.37
CDH1-211ENST00000567320 PNMA6FA0A0J9YX94 578 aa6.48□□□□□ -1.37
CDH1-211ENST00000567320 IGHA2P01877 340 aa6.48□□□□□ -1.37
CDH1-211ENST00000567320 PLCB3Q01970 1234 aa6.48□□□□□ -1.37
CDH1-211ENST00000567320 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.48□□□□□ -1.37
CDH1-211ENST00000567320 MAP1SQ66K74 1059 aaPredicted RBP6.48□□□□□ -1.37
CDH1-211ENST00000567320 SULF2Q8IWU5 870 aa6.48□□□□□ -1.37
CDH1-211ENST00000567320 FAM181AQ8N9Y4 354 aa6.48□□□□□ -1.37
CDH1-211ENST00000567320 ASIC4Q96FT7 647 aa6.48□□□□□ -1.37
CDH1-211ENST00000567320 PAK6Q9NQU5 681 aaPredicted RBP6.48□□□□□ -1.37
CDH1-211ENST00000567320 PICK1Q9NRD5 415 aa6.48□□□□□ -1.37
CDH1-211ENST00000567320 DISC1Q9NRI5 854 aa6.48□□□□□ -1.37
CDH1-211ENST00000567320 DCTN4Q9UJW0 460 aa6.48□□□□□ -1.37
CDH1-211ENST00000567320 XRCC5P13010 732 aaKnown RBP6.47□□□□□ -1.37
CDH1-211ENST00000567320 KIF4BQ2VIQ3 1234 aa6.47□□□□□ -1.37
CDH1-211ENST00000567320 NXPE4Q6UWF7 544 aa6.47□□□□□ -1.37
CDH1-211ENST00000567320 ZNF574Q6ZN55 896 aaPredicted RBP6.47□□□□□ -1.37
CDH1-211ENST00000567320 NFXL1Q6ZNB6 911 aa6.47□□□□□ -1.37
CDH1-211ENST00000567320 STK11IPQ8N1F8 1099 aa6.47□□□□□ -1.37
CDH1-211ENST00000567320 BCL7CQ8WUZ0 217 aaPredicted RBP6.47□□□□□ -1.37
CDH1-211ENST00000567320 KRT82Q9NSB4 513 aa6.47□□□□□ -1.37
CDH1-211ENST00000567320 PCOLCE2Q9UKZ9 415 aa6.47□□□□□ -1.37
CDH1-211ENST00000567320 ARNTP27540 789 aa6.46□□□□□ -1.38
CDH1-211ENST00000567320 BNIP3Q12983 259 aa6.46□□□□□ -1.38
CDH1-211ENST00000567320 ERICH6Q7L0X2 663 aa6.46□□□□□ -1.38
CDH1-211ENST00000567320 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
CDH1-211ENST00000567320 PLD6Q8N2A8 252 aaKnown RBP6.46□□□□□ -1.38
CDH1-211ENST00000567320 EMILIN2Q9BXX0 1053 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms