RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 HTTP42858 3142 aa29.51■■■□□ 2.31
RAB40C-209ENST00000565511 RASGRF1Q13972 1273 aa29.5■■■□□ 2.31
RAB40C-209ENST00000565511 OTUD5Q96G74 571 aa29.5■■■□□ 2.31
RAB40C-209ENST00000565511 HDAC5Q9UQL6 1122 aa29.5■■■□□ 2.31
RAB40C-209ENST00000565511 PNMA6EA0A0J9YXQ4 647 aa29.49■■■□□ 2.31
RAB40C-209ENST00000565511 LDHBP07195 334 aaKnown RBP29.49■■■□□ 2.31
RAB40C-209ENST00000565511 ZKSCAN4Q969J2 545 aaPredicted RBP29.49■■■□□ 2.31
RAB40C-209ENST00000565511 WRNIP1Q96S55 665 aa29.49■■■□□ 2.31
RAB40C-209ENST00000565511 GNL3LQ9NVN8 582 aaKnown RBP29.49■■■□□ 2.31
RAB40C-209ENST00000565511 DENND2AQ9ULE3 1009 aa29.49■■■□□ 2.31
RAB40C-209ENST00000565511 A0A1B0GUL7 405 aa29.48■■■□□ 2.31
RAB40C-209ENST00000565511 TCP10Q12799 353 aa29.48■■■□□ 2.31
RAB40C-209ENST00000565511 PKN2Q16513 984 aaKnown RBP29.48■■■□□ 2.31
RAB40C-209ENST00000565511 TMEM57Q8N5G2 664 aa29.48■■■□□ 2.31
RAB40C-209ENST00000565511 FAM198AQ9UFP1 575 aa29.48■■■□□ 2.31
RAB40C-209ENST00000565511 CSADQ9Y600 493 aa29.48■■■□□ 2.31
RAB40C-209ENST00000565511 SPDYE5A6NIY4 337 aa29.47■■■□□ 2.31
RAB40C-209ENST00000565511 SEMA3EO15041 775 aa29.47■■■□□ 2.31
RAB40C-209ENST00000565511 HNRNPUQ00839 825 aaKnown RBP eCLIP29.47■■■□□ 2.31
RAB40C-209ENST00000565511 FBXO46Q6PJ61 603 aaPredicted RBP29.47■■■□□ 2.31
RAB40C-209ENST00000565511 MIGA2Q7L4E1 593 aa29.47■■■□□ 2.31
RAB40C-209ENST00000565511 ZFPM1Q8IX07 1006 aa29.47■■■□□ 2.31
RAB40C-209ENST00000565511 XAGE2Q96GT9 111 aa29.47■■■□□ 2.31
RAB40C-209ENST00000565511 ZSWIM8A7E2V4 1837 aa29.47■■■□□ 2.31
RAB40C-209ENST00000565511 DOCK2Q92608 1830 aa29.47■■■□□ 2.31
RAB40C-209ENST00000565511 CCL15-CCL14A0A0B4J2E2 113 aa29.46■■■□□ 2.31
RAB40C-209ENST00000565511 ZBTB22O15209 634 aa29.46■■■□□ 2.31
RAB40C-209ENST00000565511 IPO8O15397 1037 aaKnown RBP29.46■■■□□ 2.31
RAB40C-209ENST00000565511 CCL15Q16663 113 aa29.46■■■□□ 2.31
RAB40C-209ENST00000565511 FAM43AQ8N2R8 423 aa29.46■■■□□ 2.31
RAB40C-209ENST00000565511 FAM151AQ8WW52 585 aa29.46■■■□□ 2.31
RAB40C-209ENST00000565511 RFX7Q2KHR2 1363 aa29.46■■■□□ 2.31
RAB40C-209ENST00000565511 INPP5BP32019 993 aa29.45■■■□□ 2.31
RAB40C-209ENST00000565511 OTOP1Q7RTM1 612 aa29.45■■■□□ 2.31
RAB40C-209ENST00000565511 CD99L2Q8TCZ2 262 aa29.45■■■□□ 2.31
RAB40C-209ENST00000565511 PDE4DIPQ5VU43 2346 aa29.45■■■□□ 2.3
RAB40C-209ENST00000565511 GNAI2P04899 355 aa29.44■■■□□ 2.3
RAB40C-209ENST00000565511 USP40Q9NVE5 1235 aa29.44■■■□□ 2.3
RAB40C-209ENST00000565511 TRIM17Q9Y577 477 aa29.44■■■□□ 2.3
RAB40C-209ENST00000565511 GAKO14976 1311 aa29.44■■■□□ 2.3
RAB40C-209ENST00000565511 PI16Q6UXB8 463 aa29.43■■■□□ 2.3
RAB40C-209ENST00000565511 ZNF384Q8TF68 577 aa29.43■■■□□ 2.3
RAB40C-209ENST00000565511 ATRNL1Q5VV63 1379 aa29.42■■■□□ 2.3
RAB40C-209ENST00000565511 GTF2A2P52657 109 aa29.42■■■□□ 2.3
RAB40C-209ENST00000565511 OTUD7BQ6GQQ9 843 aa29.42■■■□□ 2.3
RAB40C-209ENST00000565511 ZNF341Q9BYN7 854 aa29.42■■■□□ 2.3
RAB40C-209ENST00000565511 PDS5AQ29RF7 1337 aaKnown RBP29.42■■■□□ 2.3
RAB40C-209ENST00000565511 IRF6O14896 467 aa29.41■■■□□ 2.3
RAB40C-209ENST00000565511 ZKSCAN2Q63HK3 967 aa29.41■■■□□ 2.3
RAB40C-209ENST00000565511 DIEXFQ68CQ4 756 aaKnown RBP29.41■■■□□ 2.3
RAB40C-209ENST00000565511 ERO1BQ86YB8 467 aa29.41■■■□□ 2.3
RAB40C-209ENST00000565511 SLURP2P0DP57 97 aa29.4■■■□□ 2.3
RAB40C-209ENST00000565511 DCAF15Q66K64 600 aa29.4■■■□□ 2.3
RAB40C-209ENST00000565511 ABCF2Q9UG63 623 aa29.4■■■□□ 2.3
RAB40C-209ENST00000565511 ZNF112Q9UJU3 913 aa29.4■■■□□ 2.3
RAB40C-209ENST00000565511 RLBP1P12271 317 aa29.39■■■□□ 2.3
RAB40C-209ENST00000565511 TAF1CQ15572 869 aaPredicted RBP29.39■■■□□ 2.3
RAB40C-209ENST00000565511 SH3BP5LQ7L8J4 393 aa29.39■■■□□ 2.3
RAB40C-209ENST00000565511 NEUROD6Q96NK8 337 aa29.39■■■□□ 2.3
RAB40C-209ENST00000565511 C1orf115Q9H7X2 142 aa29.39■■■□□ 2.3
RAB40C-209ENST00000565511 HMG20BQ9P0W2 317 aa29.39■■■□□ 2.3
RAB40C-209ENST00000565511 AKAP2Q9Y2D5 859 aa29.39■■■□□ 2.3
RAB40C-209ENST00000565511 RGS3P49796 1198 aa29.38■■■□□ 2.29
RAB40C-209ENST00000565511 PPIL2Q13356 520 aa29.38■■■□□ 2.29
RAB40C-209ENST00000565511 MVPQ14764 893 aaKnown RBP29.38■■■□□ 2.29
RAB40C-209ENST00000565511 HOOK2Q96ED9 719 aa29.38■■■□□ 2.29
RAB40C-209ENST00000565511 DDX4Q9NQI0 724 aaKnown RBP29.38■■■□□ 2.29
RAB40C-209ENST00000565511 BTBD19C9JJ37 291 aa29.37■■■□□ 2.29
RAB40C-209ENST00000565511 SP3Q02447 781 aa29.37■■■□□ 2.29
RAB40C-209ENST00000565511 DZIP1Q86YF9 867 aaKnown RBP29.37■■■□□ 2.29
RAB40C-209ENST00000565511 ERO1AQ96HE7 468 aa29.37■■■□□ 2.29
RAB40C-209ENST00000565511 WDHD1O75717 1129 aaPredicted RBP29.36■■■□□ 2.29
RAB40C-209ENST00000565511 POLA2Q14181 598 aa29.36■■■□□ 2.29
RAB40C-209ENST00000565511 TBC1D9Q6ZT07 1266 aa29.36■■■□□ 2.29
RAB40C-209ENST00000565511 ZGPATQ8N5A5 531 aaKnown RBP29.36■■■□□ 2.29
RAB40C-209ENST00000565511 MECOMQ03112 1051 aa29.35■■■□□ 2.29
RAB40C-209ENST00000565511 IDI2Q9BXS1 227 aa29.35■■■□□ 2.29
RAB40C-209ENST00000565511 MROH7-TTC4A0A0A0MT08 1334 aa29.35■■■□□ 2.29
RAB40C-209ENST00000565511 MYO5AQ9Y4I1 1855 aaKnown RBP29.35■■■□□ 2.29
RAB40C-209ENST00000565511 CETPP11597 493 aa29.34■■■□□ 2.29
RAB40C-209ENST00000565511 BTDP43251 543 aa29.34■■■□□ 2.29
RAB40C-209ENST00000565511 SNAPC2Q13487 334 aa29.34■■■□□ 2.29
RAB40C-209ENST00000565511 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.34■■■□□ 2.29
RAB40C-209ENST00000565511 PTPN22Q9Y2R2 807 aa29.34■■■□□ 2.29
RAB40C-209ENST00000565511 DDTLA6NHG4 134 aaPredicted RBP29.33■■■□□ 2.29
RAB40C-209ENST00000565511 ARID4AP29374 1257 aaPredicted RBP29.33■■■□□ 2.29
RAB40C-209ENST00000565511 MCAMP43121 646 aa29.33■■■□□ 2.29
RAB40C-209ENST00000565511 RHBDL3P58872 404 aa29.33■■■□□ 2.29
RAB40C-209ENST00000565511 PPATQ06203 517 aa29.33■■■□□ 2.29
RAB40C-209ENST00000565511 G3BP1Q13283 466 aaKnown RBP eCLIP29.33■■■□□ 2.29
RAB40C-209ENST00000565511 MOGSQ13724 837 aa29.33■■■□□ 2.29
RAB40C-209ENST00000565511 NOL9Q5SY16 702 aaKnown RBP29.33■■■□□ 2.29
RAB40C-209ENST00000565511 FAM163AQ96GL9 167 aaPredicted RBP29.33■■■□□ 2.29
RAB40C-209ENST00000565511 EFCC1Q9HA90 598 aa29.33■■■□□ 2.29
RAB40C-209ENST00000565511 ZFYVE28Q9HCC9 887 aa29.33■■■□□ 2.29
RAB40C-209ENST00000565511 PHIPQ8WWQ0 1821 aa29.33■■■□□ 2.29
RAB40C-209ENST00000565511 CENPFP49454 3210 aa29.33■■■□□ 2.29
RAB40C-209ENST00000565511 PHF20L1A8MW92 1017 aa29.32■■■□□ 2.28
RAB40C-209ENST00000565511 SPATA5Q8NB90 893 aa29.32■■■□□ 2.28
RAB40C-209ENST00000565511 SSH3Q8TE77 659 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 409.6 ms