RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CCL15Q16663 113 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 FKBP1CQ5VVH2 108 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 CDC42EP5Q6NZY7 148 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 ERO1BQ86YB8 467 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 ZSCAN29Q8IWY8 852 aaPredicted RBP7.93□□□□□ -1.14
TCF4-228ENST00000565393 SLF2Q8IX21 1173 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.93□□□□□ -1.14
TCF4-228ENST00000565393 XAGE2Q96GT9 111 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 CFHR5Q9BXR6 569 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 ZNF341Q9BYN7 854 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 ZFYVE28Q9HCC9 887 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 DAGLAQ9Y4D2 1042 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 TRIM17Q9Y577 477 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 THSD7BQ9C0I4 1608 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 SPEF2Q9C093 1822 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 TESPA1A2RU30 521 aaPredicted RBP7.92□□□□□ -1.14
TCF4-228ENST00000565393 CETPP11597 493 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 SP3Q02447 781 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 SNAPC2Q13487 334 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 ARHGEF6Q15052 776 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 TAF1CQ15572 869 aaPredicted RBP7.92□□□□□ -1.14
TCF4-228ENST00000565393 FBXO46Q6PJ61 603 aaPredicted RBP7.92□□□□□ -1.14
TCF4-228ENST00000565393 DZIP1Q86YF9 867 aaKnown RBP7.92□□□□□ -1.14
TCF4-228ENST00000565393 ZFPM1Q8IX07 1006 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 FTSJ3Q8IY81 847 aaKnown RBP7.92□□□□□ -1.14
TCF4-228ENST00000565393 TMEM57Q8N5G2 664 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 CD99L2Q8TCZ2 262 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 ERO1AQ96HE7 468 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 MS4A4AQ96JQ5 239 aa7.92□□□□□ -1.14
TCF4-228ENST00000565393 PNMA6EA0A0J9YXQ4 647 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 SPDYE5A6NIY4 337 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 SURF6O75683 361 aaKnown RBP7.91□□□□□ -1.14
TCF4-228ENST00000565393 ECM2O94769 699 aaPredicted RBP7.91□□□□□ -1.14
TCF4-228ENST00000565393 LDHCP07864 332 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 INPP5BP32019 993 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 ATP8B2P98198 1209 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 PPATQ06203 517 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 NFIAQ12857 509 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 PICALMQ13492 652 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 MTX1Q13505 466 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 RASGRF1Q13972 1273 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 TBC1D9Q6ZT07 1266 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 ERICH6Q7L0X2 663 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 OTOP1Q7RTM1 612 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 BRI3BPQ8WY22 251 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 EFCC1Q9HA90 598 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 RAI14Q9P0K7 980 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 LRP2BPQ9P2M1 347 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 SALL1Q9NSC2 1324 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 SSC5DA1L4H1 1573 aa7.91□□□□□ -1.14
TCF4-228ENST00000565393 MYH3P11055 1940 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 IRF6O14896 467 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 BTDP43251 543 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 GSTO1P78417 241 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 MECOMQ03112 1051 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 KIF22Q14807 665 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 CCDC158Q5M9N0 1113 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 TTC39AQ5SRH9 613 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 ITPRIPQ8IWB1 547 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 FAM43AQ8N2R8 423 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.9□□□□□ -1.14
TCF4-228ENST00000565393 SPATA5Q8NB90 893 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 PICK1Q9NRD5 415 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 HMG20BQ9P0W2 317 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 FAM198AQ9UFP1 575 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 SNCAIPQ9Y6H5 919 aa7.9□□□□□ -1.14
TCF4-228ENST00000565393 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.9□□□□□ -1.14
TCF4-228ENST00000565393 POLR2AP24928 1970 aaKnown RBP7.9□□□□□ -1.15
TCF4-228ENST00000565393 BTBD19C9JJ37 291 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 ZBTB7BO15156 539 aaPredicted RBP7.89□□□□□ -1.15
TCF4-228ENST00000565393 ENTPD3O75355 529 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 UQCRFS1P1P0C7P4 283 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 RGS3P49796 1198 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 PPIL2Q13356 520 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 FAM163AQ96GL9 167 aaPredicted RBP7.89□□□□□ -1.15
TCF4-228ENST00000565393 NOL10Q9BSC4 688 aaKnown RBP7.89□□□□□ -1.15
TCF4-228ENST00000565393 IDI2Q9BXS1 227 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 BCL11AQ9H165 835 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 C1orf115Q9H7X2 142 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 SNRKQ9NRH2 765 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 ZNF112Q9UJU3 913 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 PTPN22Q9Y2R2 807 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 ZHX2Q9Y6X8 837 aa7.89□□□□□ -1.15
TCF4-228ENST00000565393 GPR75-ASB3A0A0A6YYF3 556 aa7.88□□□□□ -1.15
TCF4-228ENST00000565393 PDHXO00330 501 aa7.88□□□□□ -1.15
TCF4-228ENST00000565393 CXCL11O14625 94 aa7.88□□□□□ -1.15
TCF4-228ENST00000565393 TLR2O60603 784 aa7.88□□□□□ -1.15
TCF4-228ENST00000565393 PI16Q6UXB8 463 aa7.88□□□□□ -1.15
TCF4-228ENST00000565393 NBPF11Q86T75 865 aa7.88□□□□□ -1.15
TCF4-228ENST00000565393 CPA4Q9UI42 421 aa7.88□□□□□ -1.15
TCF4-228ENST00000565393 CACNA1FO60840 1977 aa7.88□□□□□ -1.15
TCF4-228ENST00000565393 MROH7-TTC4A0A0A0MT08 1334 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 PDS5AQ29RF7 1337 aaKnown RBP7.87□□□□□ -1.15
TCF4-228ENST00000565393 DDTLA6NHG4 134 aaPredicted RBP7.87□□□□□ -1.15
TCF4-228ENST00000565393 ZBTB22O15209 634 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 CTNND1O60716 968 aaKnown RBP7.87□□□□□ -1.15
TCF4-228ENST00000565393 FMNL1O95466 1100 aaPredicted RBP7.87□□□□□ -1.15
TCF4-228ENST00000565393 BAG3O95817 575 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 MYCP01106 439 aaPredicted RBP7.87□□□□□ -1.15
TCF4-228ENST00000565393 POLA2Q14181 598 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms