RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 PLCD3Q8N3E9 789 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 HAUS7Q99871 368 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 SPDYE3A6NKU9 549 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 NLRP7Q8WX94 980 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 CAPS2Q9BXY5 557 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 DNAJC25Q9H1X3 360 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 VEZTQ9HBM0 779 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 BAG5Q9UL15 447 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 GNA11P29992 359 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 APBA1Q02410 837 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 KARSQ15046 597 aaKnown RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 RTN1Q16799 776 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 LRRC23Q53EV4 343 aaPredicted RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 ARHGAP45Q92619 1136 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 ZNF622Q969S3 477 aaKnown RBP eCLIP5.67□□□□□ -1.53e-7■■□□□ 11.4
SMG1-211ENST00000565324 FAM204AQ9H8W3 233 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 ANKRD20A4Q4UJ75 823 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 ANKRD20A8PQ5CZ79 823 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 ANKRD20A2Q5SQ80 823 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 ANKRD20A1Q5TYW2 823 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 DTHD1Q6ZMT9 781 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 CXorf38Q8TB03 319 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 RILPQ96NA2 401 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 NAP1L4Q99733 375 aaKnown RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 STX2P32856 288 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 HELBQ8NG08 1087 aaPredicted RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 TPX2Q9ULW0 747 aaKnown RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 PALM3A6NDB9 673 aaPredicted RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 GNAT2P19087 354 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 CCDC84Q86UT8 332 aaPredicted RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 KCNH5Q8NCM2 988 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 GOLGA5Q8TBA6 731 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 CENPKQ9BS16 269 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 PPANQ9NQ55 473 aaKnown RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 ARHGAP42A6NI28 874 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 WDR44Q5JSH3 913 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 PDZD8Q8NEN9 1154 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 PSPC1Q8WXF1 523 aaKnown RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 PRAM1Q96QH2 718 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 ZKSCAN3Q9BRR0 538 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 CABP5Q9NP86 173 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 AK9Q5TCS8 1911 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 SYNRGQ9UMZ2 1314 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 PIK3R4Q99570 1358 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 KRT2P35908 639 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 SNCBQ16143 134 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 SYT10Q6XYQ8 523 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 FAM71BQ8TC56 605 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 RUNDC3BQ96NL0 473 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 GLT8D2Q9H1C3 349 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 DBF4Q9UBU7 674 aaPredicted RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 PHEXP78562 749 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 PPP1R21Q6ZMI0 780 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 SATB2Q9UPW6 733 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 MAN1A2O60476 641 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 FLOT1O75955 427 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 KRT15P19012 456 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 PRIM1P49642 420 aaKnown RBP5.66□□□□□ -1.5
SMG1-211ENST00000565324 LEO1Q8WVC0 666 aaPredicted RBP5.66□□□□□ -1.5
SMG1-211ENST00000565324 GDPD2Q9HCC8 539 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 NUTM2GQ5VZR2 741 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 TRIM68Q6AZZ1 485 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 DDX54Q8TDD1 881 aaKnown RBP5.66□□□□□ -1.5
SMG1-211ENST00000565324 SLC52A1Q9NWF4 448 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 RPS6KA2Q15349 733 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 KRT71Q3SY84 523 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 CCDC152Q4G0S7 254 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 PPP1R1BQ9UD71 204 aaPredicted RBP5.66□□□□□ -1.5
SMG1-211ENST00000565324 EIF3DO15371 548 aaKnown RBP eCLIP5.66□□□□□ -1.55e-7■□□□□ 10.7
SMG1-211ENST00000565324 UTP14CQ5TAP6 766 aaKnown RBP5.66□□□□□ -1.5
SMG1-211ENST00000565324 RASIP1Q5U651 963 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 FBXO41Q8TF61 875 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 GRK7Q8WTQ7 553 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 RIPOR2Q9Y4F9 1068 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 APOEP02649 317 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 PLCG2P16885 1265 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 PSMD6Q15008 389 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 ZNF830Q96NB3 372 aaPredicted RBP5.66□□□□□ -1.5
SMG1-211ENST00000565324 RGS16O15492 202 aaPredicted RBP5.66□□□□□ -1.5
SMG1-211ENST00000565324 EPB41P11171 864 aaKnown RBP5.66□□□□□ -1.5
SMG1-211ENST00000565324 SMTNP53814 917 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 SMC5Q8IY18 1101 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 TRIM27P14373 513 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 CCT6AP40227 531 aaKnown RBP5.66□□□□□ -1.5
SMG1-211ENST00000565324 ESCO1Q5FWF5 840 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 TACO1Q9BSH4 297 aaKnown RBP5.66□□□□□ -1.5
SMG1-211ENST00000565324 EFCC1Q9HA90 598 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 SLC9C1Q4G0N8 1177 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 HEATR3Q7Z4Q2 680 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 SPC25Q9HBM1 224 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 ASIC3Q9UHC3 531 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 CUL7Q14999 1698 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 FANCD2Q9BXW9 1451 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 CADPSQ9ULU8 1353 aa5.66□□□□□ -1.5
SMG1-211ENST00000565324 TTC41PQ6P2S7 1318 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 SEPT2Q15019 361 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 DDX21Q9NR30 783 aaKnown RBP eCLIP5.65□□□□□ -1.5
SMG1-211ENST00000565324 POTEB3A0JP26 581 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 ARHGEF9O43307 516 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms