RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 LAMB1P07942 1786 aa13.39□□□□□ -0.27
SNX29-204ENST00000564791 COL4A5P29400 1685 aa13.38□□□□□ -0.27
SNX29-204ENST00000564791 RPS6KB1P23443 525 aa13.38□□□□□ -0.27
SNX29-204ENST00000564791 TDO2P48775 406 aa13.38□□□□□ -0.27
SNX29-204ENST00000564791 MCM2P49736 904 aa13.38□□□□□ -0.27
SNX29-204ENST00000564791 SDR42E1Q8WUS8 393 aa13.38□□□□□ -0.27
SNX29-204ENST00000564791 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
SNX29-204ENST00000564791 NACAP1Q9BZK3 213 aa13.38□□□□□ -0.27
SNX29-204ENST00000564791 NBPF3Q9H094 633 aa13.38□□□□□ -0.27
SNX29-204ENST00000564791 SPON1Q9HCB6 807 aa13.38□□□□□ -0.27
SNX29-204ENST00000564791 ZNF277Q9NRM2 450 aaPredicted RBP13.38□□□□□ -0.27
SNX29-204ENST00000564791 NAV1Q8NEY1 1877 aa13.38□□□□□ -0.27
SNX29-204ENST00000564791 ZNF213O14771 459 aa13.37□□□□□ -0.27
SNX29-204ENST00000564791 LDHCP07864 332 aa13.37□□□□□ -0.27
SNX29-204ENST00000564791 AK2P54819 239 aa13.37□□□□□ -0.27
SNX29-204ENST00000564791 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
SNX29-204ENST00000564791 TCEANC2Q96MN5 208 aa13.37□□□□□ -0.27
SNX29-204ENST00000564791 SUGT1Q9Y2Z0 365 aa13.37□□□□□ -0.27
SNX29-204ENST00000564791 TBC1D10CQ8IV04 446 aa13.36□□□□□ -0.27
SNX29-204ENST00000564791 CRNKL1Q9BZJ0 848 aaKnown RBP13.36□□□□□ -0.27
SNX29-204ENST00000564791 FOCADQ5VW36 1801 aa13.36□□□□□ -0.27
SNX29-204ENST00000564791 GAKO14976 1311 aa13.36□□□□□ -0.27
SNX29-204ENST00000564791 YDJCA8MPS7 323 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 F8W031 263 aaPredicted RBP13.35□□□□□ -0.27
SNX29-204ENST00000564791 BTDP43251 543 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 DACT2Q5SW24 774 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 STRIP1Q5VSL9 837 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 SLF2Q8IX21 1173 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 LARGE2Q8N3Y3 721 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 SH3RF3Q8TEJ3 882 aaPredicted RBP13.35□□□□□ -0.27
SNX29-204ENST00000564791 TMX3Q96JJ7 454 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 NOL10Q9BSC4 688 aaKnown RBP13.35□□□□□ -0.27
SNX29-204ENST00000564791 SLKQ9H2G2 1235 aaPredicted RBP13.35□□□□□ -0.27
SNX29-204ENST00000564791 BCS1LQ9Y276 419 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 GPR75-ASB3A0A0A6YYF3 556 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 USP17L3A6NCW0 530 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 USP17L4A6NCW7 530 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 BAG3O95817 575 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 HMGB1P09429 215 aaKnown RBP13.35□□□□□ -0.27
SNX29-204ENST00000564791 PPP4CP60510 307 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 FKBP1AP62942 108 aaKnown RBP13.35□□□□□ -0.27
SNX29-204ENST00000564791 CTDSPL2Q05D32 466 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 USP17L1Q7RTZ2 530 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 FAM163AQ96GL9 167 aaPredicted RBP13.35□□□□□ -0.27
SNX29-204ENST00000564791 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
SNX29-204ENST00000564791 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 TTF2Q9UNY4 1162 aaKnown RBP13.35□□□□□ -0.27
SNX29-204ENST00000564791 DAGLAQ9Y4D2 1042 aa13.35□□□□□ -0.27
SNX29-204ENST00000564791 DDX60LQ5H9U9 1706 aaKnown RBP13.34□□□□□ -0.27
SNX29-204ENST00000564791 ECM29Q5VYK3 1845 aa13.34□□□□□ -0.27
SNX29-204ENST00000564791 NFKBIEO00221 500 aa13.34□□□□□ -0.27
SNX29-204ENST00000564791 HSP90AA1P07900 732 aaKnown RBP13.34□□□□□ -0.27
SNX29-204ENST00000564791 GIMAP6Q6P9H5 292 aa13.34□□□□□ -0.27
SNX29-204ENST00000564791 DHX32Q7L7V1 743 aaKnown RBP13.34□□□□□ -0.27
SNX29-204ENST00000564791 VPS33BQ9H267 617 aa13.34□□□□□ -0.27
SNX29-204ENST00000564791 ALDH8A1Q9H2A2 487 aaPredicted RBP13.34□□□□□ -0.27
SNX29-204ENST00000564791 TAOK3Q9H2K8 898 aa13.34□□□□□ -0.27
SNX29-204ENST00000564791 IARSP41252 1262 aaKnown RBP13.33□□□□□ -0.28
SNX29-204ENST00000564791 SCNN1DP51172 638 aa13.33□□□□□ -0.28
SNX29-204ENST00000564791 TOB2Q14106 344 aaPredicted RBP13.33□□□□□ -0.28
SNX29-204ENST00000564791 MB21D2Q8IYB1 491 aaPredicted RBP13.33□□□□□ -0.28
SNX29-204ENST00000564791 NCOA7Q8NI08 942 aa13.33□□□□□ -0.28
SNX29-204ENST00000564791 LRRC2Q9BYS8 371 aa13.33□□□□□ -0.28
SNX29-204ENST00000564791 DCP1AQ9NPI6 582 aaPredicted RBP13.33□□□□□ -0.28
SNX29-204ENST00000564791 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
SNX29-204ENST00000564791 LIMCH1Q9UPQ0 1083 aa13.33□□□□□ -0.28
SNX29-204ENST00000564791 TACC3Q9Y6A5 838 aa13.33□□□□□ -0.28
SNX29-204ENST00000564791 MYH1P12882 1939 aa13.33□□□□□ -0.28
SNX29-204ENST00000564791 NEDD4P46934 1319 aa13.33□□□□□ -0.28
SNX29-204ENST00000564791 CYP2D7A0A087X1C5 515 aa13.32□□□□□ -0.28
SNX29-204ENST00000564791 MINDY4BA8MYZ0 360 aa13.32□□□□□ -0.28
SNX29-204ENST00000564791 LARGE1O95461 756 aa13.32□□□□□ -0.28
SNX29-204ENST00000564791 EXOSC10Q01780 885 aaKnown RBP13.32□□□□□ -0.28
SNX29-204ENST00000564791 PPARAQ07869 468 aa13.32□□□□□ -0.28
SNX29-204ENST00000564791 ANKRD1Q15327 319 aa13.32□□□□□ -0.28
SNX29-204ENST00000564791 RALYLQ86SE5 291 aaKnown RBP13.32□□□□□ -0.28
SNX29-204ENST00000564791 CERS3Q8IU89 383 aa13.32□□□□□ -0.28
SNX29-204ENST00000564791 KIAA0825Q8IV33 1275 aa13.32□□□□□ -0.28
SNX29-204ENST00000564791 GOLGB1Q14789 3259 aaKnown RBP13.32□□□□□ -0.28
SNX29-204ENST00000564791 SMIM22K7EJ46 135 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 PLCG2P16885 1265 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 USP5P45974 858 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 ANTXR2P58335 489 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 RHBDL3P58872 404 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 CUL4AQ13619 759 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 AKNAD1Q5T1N1 836 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 CTR9Q6PD62 1173 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 Q6ZUG5 572 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 CHST3Q7LGC8 479 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 NIM1KQ8IY84 436 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 TEX11Q8IYF3 940 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 NKX2-3Q8TAU0 364 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 TGFBRAP1Q8WUH2 860 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 INCENPQ9NQS7 918 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 MKRN1Q9UHC7 482 aaKnown RBP13.31□□□□□ -0.28
SNX29-204ENST00000564791 ANAPC4Q9UJX5 808 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 USP17L21D6R901 530 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 PRC1O43663 620 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms