RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 MAOBP27338 520 aa7.55□□□□□ -1.2
CDH1-207ENST00000564745 SNRPNP63162 240 aaKnown RBP7.55□□□□□ -1.2
CDH1-207ENST00000564745 AP3B2Q13367 1082 aa7.55□□□□□ -1.2
CDH1-207ENST00000564745 MIR1-1HGQ9H1L0 117 aa7.55□□□□□ -1.2
CDH1-207ENST00000564745 CCDC86Q9H6F5 360 aaKnown RBP7.55□□□□□ -1.2
CDH1-207ENST00000564745 DLGAP3O95886 979 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 LMNB1P20700 586 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 GTF2F1P35269 517 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDH1-207ENST00000564745 NASPP49321 788 aaPredicted RBP7.54□□□□□ -1.2
CDH1-207ENST00000564745 ARL4DP49703 201 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 APOBRQ0VD83 1088 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 LRRC14Q15048 493 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 POU4F3Q15319 338 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 FOXD4L6Q3SYB3 417 aaPredicted RBP7.54□□□□□ -1.2
CDH1-207ENST00000564745 SEZ6Q53EL9 994 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 FOXD4L3Q6VB84 417 aaPredicted RBP7.54□□□□□ -1.2
CDH1-207ENST00000564745 SVOPQ8N4V2 548 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 ZSCAN1Q8NBB4 408 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 NEDD1Q8NHV4 660 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 DDX54Q8TDD1 881 aaKnown RBP7.54□□□□□ -1.2
CDH1-207ENST00000564745 GATAD2BQ8WXI9 593 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 WNT8BQ93098 351 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 TRIM11Q96F44 468 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 WDR89Q96FK6 387 aaPredicted RBP7.54□□□□□ -1.2
CDH1-207ENST00000564745 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDH1-207ENST00000564745 USP26Q9BXU7 913 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 EMILIN2Q9BXX0 1053 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 OSGEPQ9NPF4 335 aa7.54□□□□□ -1.2
CDH1-207ENST00000564745 ATP2B1P20020 1258 aa7.53□□□□□ -1.2
CDH1-207ENST00000564745 TRAPPC3LQ5T215 181 aa7.53□□□□□ -1.2
CDH1-207ENST00000564745 VPS37DQ86XT2 251 aa7.53□□□□□ -1.2
CDH1-207ENST00000564745 GPBAR1Q8TDU6 330 aa7.53□□□□□ -1.2
CDH1-207ENST00000564745 NKD1Q969G9 470 aa7.53□□□□□ -1.2
CDH1-207ENST00000564745 DNAJC2Q99543 621 aaKnown RBP7.53□□□□□ -1.2
CDH1-207ENST00000564745 CACNA2D2Q9NY47 1150 aa7.53□□□□□ -1.2
CDH1-207ENST00000564745 ZNF862O60290 1169 aa7.52□□□□□ -1.21
CDH1-207ENST00000564745 CILPO75339 1184 aa7.52□□□□□ -1.21
CDH1-207ENST00000564745 ARHGEF15O94989 841 aa7.52□□□□□ -1.21
CDH1-207ENST00000564745 CYP11A1P05108 521 aa7.52□□□□□ -1.21
CDH1-207ENST00000564745 SUZ12Q15022 739 aaKnown RBP7.52□□□□□ -1.21
CDH1-207ENST00000564745 LINC00114Q6XXX2 140 aa7.52□□□□□ -1.21
CDH1-207ENST00000564745 UBASH3BQ8TF42 649 aa7.52□□□□□ -1.21
CDH1-207ENST00000564745 UBXN4Q92575 508 aa7.52□□□□□ -1.21
CDH1-207ENST00000564745 CORO1BQ9BR76 489 aa7.52□□□□□ -1.21
CDH1-207ENST00000564745 LOC100289279A0A1B0GTE1 492 aa7.51□□□□□ -1.21
CDH1-207ENST00000564745 FAM229AH3BQW9 127 aa7.51□□□□□ -1.21
CDH1-207ENST00000564745 TRIM37O94972 964 aa7.51□□□□□ -1.21
CDH1-207ENST00000564745 LIG1P18858 919 aa7.51□□□□□ -1.21
CDH1-207ENST00000564745 CCDC84Q86UT8 332 aaPredicted RBP7.51□□□□□ -1.21
CDH1-207ENST00000564745 SLITRK4Q8IW52 837 aa7.51□□□□□ -1.21
CDH1-207ENST00000564745 KLHL23Q8NBE8 558 aa7.51□□□□□ -1.21
CDH1-207ENST00000564745 PPT2Q9UMR5 302 aa7.51□□□□□ -1.21
CDH1-207ENST00000564745 A0A0A0MRY4 1105 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 WISP1O95388 367 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
CDH1-207ENST00000564745 CD68P34810 354 aaPredicted RBP7.5□□□□□ -1.21
CDH1-207ENST00000564745 SOX9P48436 509 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 PDE3AQ14432 1141 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 INPP5AQ14642 412 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 CCDC81Q6ZN84 652 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 ACSBG1Q96GR2 724 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 SEC16BQ96JE7 1060 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 PLVAPQ9BX97 442 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 LRRC3Q9BY71 257 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 BRMS1Q9HCU9 246 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 PCDHA4Q9UN74 947 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 MRVI1Q9Y6F6 885 aa7.5□□□□□ -1.21
CDH1-207ENST00000564745 MPP2Q14168 576 aa7.49□□□□□ -1.21
CDH1-207ENST00000564745 REC114Q7Z4M0 266 aa7.49□□□□□ -1.21
CDH1-207ENST00000564745 FMR1NBQ8N0W7 255 aaPredicted RBP7.49□□□□□ -1.21
CDH1-207ENST00000564745 POLR3KQ9Y2Y1 108 aaPredicted RBP7.49□□□□□ -1.21
CDH1-207ENST00000564745 ROBO2Q9HCK4 1378 aa7.48□□□□□ -1.21
CDH1-207ENST00000564745 DLL1O00548 723 aa7.48□□□□□ -1.21
CDH1-207ENST00000564745 GRIN3BO60391 1043 aa7.48□□□□□ -1.21
CDH1-207ENST00000564745 MCM4P33991 863 aa7.48□□□□□ -1.21
CDH1-207ENST00000564745 RPL6Q02878 288 aaKnown RBP7.48□□□□□ -1.21
CDH1-207ENST00000564745 CLCQ05315 142 aa7.48□□□□□ -1.21
CDH1-207ENST00000564745 LRFN4Q6PJG9 635 aa7.48□□□□□ -1.21
CDH1-207ENST00000564745 FBXO11Q86XK2 927 aa7.48□□□□□ -1.21
CDH1-207ENST00000564745 PLPPR2Q96GM1 343 aa7.48□□□□□ -1.21
CDH1-207ENST00000564745 ZNF408Q9H9D4 720 aa7.48□□□□□ -1.21
CDH1-207ENST00000564745 DCDC2CA8MYV0 355 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 BPNT1O95861 308 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 SSBP05455 408 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDH1-207ENST00000564745 ETFBP38117 255 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 CWF19L2Q2TBE0 894 aaKnown RBP7.47□□□□□ -1.21
CDH1-207ENST00000564745 WIPI1Q5MNZ9 446 aaPredicted RBP7.47□□□□□ -1.21
CDH1-207ENST00000564745 GK5Q6ZS86 529 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 MAP4K3Q8IVH8 894 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 SPATA32Q96LK8 384 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 WDR18Q9BV38 432 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 ENAMQ9NRM1 1142 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 KRT82Q9NSB4 513 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 CORINQ9Y5Q5 1042 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 CSADQ9Y600 493 aa7.47□□□□□ -1.21
CDH1-207ENST00000564745 GFRA2O00451 464 aa7.46□□□□□ -1.22
CDH1-207ENST00000564745 DTWD1Q8N5C7 304 aa7.46□□□□□ -1.22
CDH1-207ENST00000564745 PMFBP1Q8TBY8 1022 aa7.46□□□□□ -1.22
CDH1-207ENST00000564745 PCDHGC5Q9Y5F6 944 aa7.46□□□□□ -1.22
CDH1-207ENST00000564745 AOC2O75106 756 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms