RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 GAKO14976 1311 aa19.38■□□□□ 0.69
RAB40C-208ENST00000564703 CYP7A1P22680 504 aa19.38■□□□□ 0.69
RAB40C-208ENST00000564703 BTDP43251 543 aa19.38■□□□□ 0.69
RAB40C-208ENST00000564703 FMR1Q06787 632 aaKnown RBP eCLIP19.38■□□□□ 0.69
RAB40C-208ENST00000564703 SUPT20HL1Q3ZLR7 823 aa19.38■□□□□ 0.69
RAB40C-208ENST00000564703 SLC9C2Q5TAH2 1124 aa19.38■□□□□ 0.69
RAB40C-208ENST00000564703 CDC42EP5Q6NZY7 148 aa19.38■□□□□ 0.69
RAB40C-208ENST00000564703 C2orf69Q8N8R5 385 aa19.38■□□□□ 0.69
RAB40C-208ENST00000564703 CDCA5Q96FF9 252 aa19.38■□□□□ 0.69
RAB40C-208ENST00000564703 MAP4K4O95819 1239 aaPredicted RBP19.37■□□□□ 0.69
RAB40C-208ENST00000564703 PLCG2P16885 1265 aa19.37■□□□□ 0.69
RAB40C-208ENST00000564703 RASA3Q14644 834 aa19.37■□□□□ 0.69
RAB40C-208ENST00000564703 FKBP1CQ5VVH2 108 aa19.37■□□□□ 0.69
RAB40C-208ENST00000564703 PRAMEF18Q5VWM3 479 aa19.37■□□□□ 0.69
RAB40C-208ENST00000564703 ZSCAN25Q6NSZ9 544 aa19.37■□□□□ 0.69
RAB40C-208ENST00000564703 MAGEB6Q8N7X4 407 aa19.37■□□□□ 0.69
RAB40C-208ENST00000564703 OTUD7AQ8TE49 926 aaPredicted RBP19.37■□□□□ 0.69
RAB40C-208ENST00000564703 CREBZFQ9NS37 354 aa19.37■□□□□ 0.69
RAB40C-208ENST00000564703 CACNB3P54284 484 aa19.36■□□□□ 0.69
RAB40C-208ENST00000564703 LRRFIP1Q32MZ4 808 aaKnown RBP19.36■□□□□ 0.69
RAB40C-208ENST00000564703 CST9Q5W186 159 aa19.36■□□□□ 0.69
RAB40C-208ENST00000564703 TSHZ3Q63HK5 1081 aa19.36■□□□□ 0.69
RAB40C-208ENST00000564703 DLK2Q6UY11 383 aa19.36■□□□□ 0.69
RAB40C-208ENST00000564703 EDC3Q96F86 508 aaKnown RBP19.36■□□□□ 0.69
RAB40C-208ENST00000564703 CCDC136Q96JN2 1154 aa19.36■□□□□ 0.69
RAB40C-208ENST00000564703 ABT1Q9ULW3 272 aaKnown RBP19.36■□□□□ 0.69
RAB40C-208ENST00000564703 AOX1Q06278 1338 aa19.35■□□□□ 0.69
RAB40C-208ENST00000564703 PDE1AP54750 535 aa19.35■□□□□ 0.69
RAB40C-208ENST00000564703 TTLL12Q14166 644 aaPredicted RBP19.35■□□□□ 0.69
RAB40C-208ENST00000564703 FAM83AQ86UY5 434 aa19.35■□□□□ 0.69
RAB40C-208ENST00000564703 CERS3Q8IU89 383 aa19.35■□□□□ 0.69
RAB40C-208ENST00000564703 ZNF384Q8TF68 577 aa19.35■□□□□ 0.69
RAB40C-208ENST00000564703 STAP2Q9UGK3 403 aa19.35■□□□□ 0.69
RAB40C-208ENST00000564703 HOOK2Q96ED9 719 aa19.34■□□□□ 0.69
RAB40C-208ENST00000564703 GBA2Q9HCG7 927 aaPredicted RBP19.34■□□□□ 0.69
RAB40C-208ENST00000564703 AATFQ9NY61 560 aaKnown RBP eCLIP19.34■□□□□ 0.69
RAB40C-208ENST00000564703 ECM29Q5VYK3 1845 aa19.34■□□□□ 0.69
RAB40C-208ENST00000564703 TRPM7Q96QT4 1865 aa19.33■□□□□ 0.69
RAB40C-208ENST00000564703 PPP1R12BO60237 982 aaPredicted RBP19.33■□□□□ 0.68
RAB40C-208ENST00000564703 PPP4CP60510 307 aa19.33■□□□□ 0.68
RAB40C-208ENST00000564703 TCP10Q12799 353 aa19.33■□□□□ 0.68
RAB40C-208ENST00000564703 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.68
RAB40C-208ENST00000564703 FAM151AQ8WW52 585 aa19.33■□□□□ 0.68
RAB40C-208ENST00000564703 PDE6AP16499 860 aa19.32■□□□□ 0.68
RAB40C-208ENST00000564703 FKBP1BP68106 108 aa19.32■□□□□ 0.68
RAB40C-208ENST00000564703 CENPQQ7L2Z9 268 aaPredicted RBP19.32■□□□□ 0.68
RAB40C-208ENST00000564703 ARMC9Q7Z3E5 817 aa19.32■□□□□ 0.68
RAB40C-208ENST00000564703 ZSCAN29Q8IWY8 852 aaPredicted RBP19.32■□□□□ 0.68
RAB40C-208ENST00000564703 TEX11Q8IYF3 940 aa19.32■□□□□ 0.68
RAB40C-208ENST00000564703 PI4K2BQ8TCG2 481 aa19.32■□□□□ 0.68
RAB40C-208ENST00000564703 IDI2Q9BXS1 227 aa19.32■□□□□ 0.68
RAB40C-208ENST00000564703 TMEM39BQ9GZU3 492 aa19.32■□□□□ 0.68
RAB40C-208ENST00000564703 SALL3Q9BXA9 1300 aa19.31■□□□□ 0.68
RAB40C-208ENST00000564703 ZNF532Q9HCE3 1301 aa19.31■□□□□ 0.68
RAB40C-208ENST00000564703 MYO5AQ9Y4I1 1855 aaKnown RBP19.31■□□□□ 0.68
RAB40C-208ENST00000564703 MAGEB6P1A0A0J9YX57 407 aa19.31■□□□□ 0.68
RAB40C-208ENST00000564703 ENTPD3O75355 529 aa19.31■□□□□ 0.68
RAB40C-208ENST00000564703 PICALMQ13492 652 aa19.31■□□□□ 0.68
RAB40C-208ENST00000564703 DEFB115Q30KQ5 88 aa19.31■□□□□ 0.68
RAB40C-208ENST00000564703 NBPF12Q5TAG4 269 aaPredicted RBP19.31■□□□□ 0.68
RAB40C-208ENST00000564703 PLEKHM2Q8IWE5 1019 aa19.31■□□□□ 0.68
RAB40C-208ENST00000564703 KBTBD3Q8NAB2 608 aa19.31■□□□□ 0.68
RAB40C-208ENST00000564703 MIGA1Q8NAN2 632 aa19.31■□□□□ 0.68
RAB40C-208ENST00000564703 AK9Q5TCS8 1911 aa19.3■□□□□ 0.68
RAB40C-208ENST00000564703 ZFYP08048 801 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-208ENST00000564703 ADD2P35612 726 aa19.3■□□□□ 0.68
RAB40C-208ENST00000564703 RGS3P49796 1198 aa19.3■□□□□ 0.68
RAB40C-208ENST00000564703 RHBDL3P58872 404 aa19.3■□□□□ 0.68
RAB40C-208ENST00000564703 HTRA3P83110 453 aa19.3■□□□□ 0.68
RAB40C-208ENST00000564703 PRKG1Q13976 671 aa19.3■□□□□ 0.68
RAB40C-208ENST00000564703 PAXIP1Q6ZW49 1069 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-208ENST00000564703 ADGRA1Q86SQ6 560 aa19.3■□□□□ 0.68
RAB40C-208ENST00000564703 SH3RF3Q8TEJ3 882 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-208ENST00000564703 EVI5LQ96CN4 794 aa19.3■□□□□ 0.68
RAB40C-208ENST00000564703 FSD1Q9BTV5 496 aa19.3■□□□□ 0.68
RAB40C-208ENST00000564703 TRIM6-TRIM34B2RNG4 842 aa19.29■□□□□ 0.68
RAB40C-208ENST00000564703 HUNKP57058 714 aa19.29■□□□□ 0.68
RAB40C-208ENST00000564703 NFIAQ12857 509 aa19.29■□□□□ 0.68
RAB40C-208ENST00000564703 UBE3CQ15386 1083 aa19.29■□□□□ 0.68
RAB40C-208ENST00000564703 OSBPL3Q9H4L5 887 aa19.29■□□□□ 0.68
RAB40C-208ENST00000564703 FAM198AQ9UFP1 575 aa19.29■□□□□ 0.68
RAB40C-208ENST00000564703 TLL2Q9Y6L7 1015 aa19.29■□□□□ 0.68
RAB40C-208ENST00000564703 NPM3O75607 178 aaKnown RBP19.28■□□□□ 0.68
RAB40C-208ENST00000564703 WDHD1O75717 1129 aaPredicted RBP19.28■□□□□ 0.68
RAB40C-208ENST00000564703 USP5P45974 858 aa19.28■□□□□ 0.68
RAB40C-208ENST00000564703 DYNLL1P63167 89 aaKnown RBP19.28■□□□□ 0.68
RAB40C-208ENST00000564703 SAPCD2Q86UD0 394 aa19.28■□□□□ 0.68
RAB40C-208ENST00000564703 TGFBRAP1Q8WUH2 860 aa19.28■□□□□ 0.68
RAB40C-208ENST00000564703 RILPL2Q969X0 211 aa19.28■□□□□ 0.68
RAB40C-208ENST00000564703 ANGEL1Q9UNK9 670 aaKnown RBP19.28■□□□□ 0.68
RAB40C-208ENST00000564703 UBE2Q2LH0YL09 131 aa19.27■□□□□ 0.68
RAB40C-208ENST00000564703 RNF113AO15541 343 aaKnown RBP19.27■□□□□ 0.68
RAB40C-208ENST00000564703 IREB2P48200 963 aaKnown RBP19.27■□□□□ 0.68
RAB40C-208ENST00000564703 DCAF15Q66K64 600 aa19.27■□□□□ 0.68
RAB40C-208ENST00000564703 TEPSINQ96N21 525 aa19.27■□□□□ 0.68
RAB40C-208ENST00000564703 CRNKL1Q9BZJ0 848 aaKnown RBP19.27■□□□□ 0.68
RAB40C-208ENST00000564703 PPP4R2Q9NY27 417 aa19.27■□□□□ 0.68
RAB40C-208ENST00000564703 MKRN1Q9UHC7 482 aaKnown RBP19.27■□□□□ 0.68
RAB40C-208ENST00000564703 CNTNAP1P78357 1384 aa19.27■□□□□ 0.68
RAB40C-208ENST00000564703 TCRBV5S4A2TA0A5A2 114 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms