RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 SMC5Q8IY18 1101 aa21.11■□□□□ 0.97
USB1-209ENST00000564387 IDI2Q9BXS1 227 aa21.11■□□□□ 0.97
USB1-209ENST00000564387 ANTXR1Q9H6X2 564 aa21.11■□□□□ 0.97
USB1-209ENST00000564387 RAI14Q9P0K7 980 aa21.11■□□□□ 0.97
USB1-209ENST00000564387 MKRN1Q9UHC7 482 aaKnown RBP21.11■□□□□ 0.97
USB1-209ENST00000564387 RPAP1Q9BWH6 1393 aaPredicted RBP21.1■□□□□ 0.97
USB1-209ENST00000564387 TCP10L2B9ZVM9 353 aa21.1■□□□□ 0.97
USB1-209ENST00000564387 NF2P35240 595 aa21.1■□□□□ 0.97
USB1-209ENST00000564387 RHBDL3P58872 404 aa21.1■□□□□ 0.97
USB1-209ENST00000564387 MAP3K11Q16584 847 aa21.1■□□□□ 0.97
USB1-209ENST00000564387 SUPT20HL1Q3ZLR7 823 aa21.1■□□□□ 0.97
USB1-209ENST00000564387 RWDD1Q9H446 243 aaPredicted RBP21.1■□□□□ 0.97
USB1-209ENST00000564387 USP40Q9NVE5 1235 aa21.1■□□□□ 0.97
USB1-209ENST00000564387 TMOD2Q9NZR1 351 aa21.1■□□□□ 0.97
USB1-209ENST00000564387 NDUFB9Q9Y6M9 179 aa21.1■□□□□ 0.97
USB1-209ENST00000564387 PCNTO95613 3336 aa21.1■□□□□ 0.97
USB1-209ENST00000564387 NPM3O75607 178 aaKnown RBP21.09■□□□□ 0.97
USB1-209ENST00000564387 VEGFBP49765 207 aa21.09■□□□□ 0.97
USB1-209ENST00000564387 CACNB3P54284 484 aa21.09■□□□□ 0.97
USB1-209ENST00000564387 HUNKP57058 714 aa21.09■□□□□ 0.97
USB1-209ENST00000564387 PPP4CP60510 307 aa21.09■□□□□ 0.97
USB1-209ENST00000564387 TTF1Q15361 905 aaPredicted RBP21.09■□□□□ 0.97
USB1-209ENST00000564387 NBPF12Q5TAG4 269 aaPredicted RBP21.09■□□□□ 0.97
USB1-209ENST00000564387 HAUS7Q99871 368 aa21.09■□□□□ 0.97
USB1-209ENST00000564387 ECHDC1Q9NTX5 307 aa21.09■□□□□ 0.97
USB1-209ENST00000564387 FAM198AQ9UFP1 575 aa21.09■□□□□ 0.97
USB1-209ENST00000564387 SALL3Q9BXA9 1300 aa21.08■□□□□ 0.97
USB1-209ENST00000564387 IGHDP01880 384 aa21.08■□□□□ 0.97
USB1-209ENST00000564387 BTDP43251 543 aa21.08■□□□□ 0.97
USB1-209ENST00000564387 NFIAQ12857 509 aa21.08■□□□□ 0.97
USB1-209ENST00000564387 NAA16Q6N069 864 aaPredicted RBP21.08■□□□□ 0.97
USB1-209ENST00000564387 FAM151AQ8WW52 585 aa21.08■□□□□ 0.97
USB1-209ENST00000564387 TMEM39BQ9GZU3 492 aa21.08■□□□□ 0.97
USB1-209ENST00000564387 THSD7BQ9C0I4 1608 aa21.07■□□□□ 0.96
USB1-209ENST00000564387 UNCXA6NJT0 531 aa21.07■□□□□ 0.96
USB1-209ENST00000564387 ENTPD3O75355 529 aa21.07■□□□□ 0.96
USB1-209ENST00000564387 WDHD1O75717 1129 aaPredicted RBP21.07■□□□□ 0.96
USB1-209ENST00000564387 LDLRAD1Q5T700 205 aa21.07■□□□□ 0.96
USB1-209ENST00000564387 ADGRA1Q86SQ6 560 aa21.07■□□□□ 0.96
USB1-209ENST00000564387 CDAN1Q8IWY9 1227 aa21.07■□□□□ 0.96
USB1-209ENST00000564387 WDR33Q9C0J8 1336 aaKnown RBP21.06■□□□□ 0.96
USB1-209ENST00000564387 ECE1P42892 770 aa21.06■□□□□ 0.96
USB1-209ENST00000564387 MAP3K12Q12852 859 aa21.06■□□□□ 0.96
USB1-209ENST00000564387 RGMBQ6NW40 437 aa21.06■□□□□ 0.96
USB1-209ENST00000564387 MOB2Q70IA6 237 aa21.06■□□□□ 0.96
USB1-209ENST00000564387 CAPNS2Q96L46 248 aa21.06■□□□□ 0.96
USB1-209ENST00000564387 BOLA2Q9H3K6 86 aa21.06■□□□□ 0.96
USB1-209ENST00000564387 TTC41PQ6P2S7 1318 aa21.05■□□□□ 0.96
USB1-209ENST00000564387 IDH1O75874 414 aaKnown RBP21.05■□□□□ 0.96
USB1-209ENST00000564387 IRX6P78412 446 aaPredicted RBP21.05■□□□□ 0.96
USB1-209ENST00000564387 ANKRD45Q5TZF3 282 aa21.05■□□□□ 0.96
USB1-209ENST00000564387 CYP4F22Q6NT55 531 aa21.05■□□□□ 0.96
USB1-209ENST00000564387 PAG1Q9NWQ8 432 aa21.05■□□□□ 0.96
USB1-209ENST00000564387 FAM155AB1AL88 458 aaPredicted RBP21.04■□□□□ 0.96
USB1-209ENST00000564387 UBE2Q2LH0YL09 131 aa21.04■□□□□ 0.96
USB1-209ENST00000564387 GOLIM4O00461 696 aa21.04■□□□□ 0.96
USB1-209ENST00000564387 PPP1R12BO60237 982 aaPredicted RBP21.04■□□□□ 0.96
USB1-209ENST00000564387 USP2O75604 605 aaPredicted RBP21.04■□□□□ 0.96
USB1-209ENST00000564387 ARMC9Q7Z3E5 817 aa21.04■□□□□ 0.96
USB1-209ENST00000564387 GPATCH3Q96I76 525 aa21.04■□□□□ 0.96
USB1-209ENST00000564387 DNAJC2Q99543 621 aaKnown RBP21.04■□□□□ 0.96
USB1-209ENST00000564387 BAG3O95817 575 aa21.03■□□□□ 0.96
USB1-209ENST00000564387 CYP7A1P22680 504 aa21.03■□□□□ 0.96
USB1-209ENST00000564387 MAP2K2P36507 400 aa21.03■□□□□ 0.96
USB1-209ENST00000564387 RGS3P49796 1198 aa21.03■□□□□ 0.96
USB1-209ENST00000564387 ZFPM1Q8IX07 1006 aa21.03■□□□□ 0.96
USB1-209ENST00000564387 PI4K2BQ8TCG2 481 aa21.03■□□□□ 0.96
USB1-209ENST00000564387 OTUD7AQ8TE49 926 aaPredicted RBP21.03■□□□□ 0.96
USB1-209ENST00000564387 CCDC102AQ96A19 550 aa21.03■□□□□ 0.96
USB1-209ENST00000564387 EDC3Q96F86 508 aaKnown RBP21.03■□□□□ 0.96
USB1-209ENST00000564387 BCL11AQ9H165 835 aa21.03■□□□□ 0.96
USB1-209ENST00000564387 DDX4Q9NQI0 724 aaKnown RBP21.03■□□□□ 0.96
USB1-209ENST00000564387 COL2A1P02458 1487 aaPredicted RBP21.02■□□□□ 0.96
USB1-209ENST00000564387 TCRBV5S4A2TA0A5A2 114 aa21.02■□□□□ 0.96
USB1-209ENST00000564387 PLCG2P16885 1265 aa21.02■□□□□ 0.96
USB1-209ENST00000564387 MAP3K10Q02779 954 aa21.02■□□□□ 0.96
USB1-209ENST00000564387 CERS3Q8IU89 383 aa21.02■□□□□ 0.96
USB1-209ENST00000564387 MAGEB6Q8N7X4 407 aa21.02■□□□□ 0.96
USB1-209ENST00000564387 HOOK2Q96ED9 719 aa21.02■□□□□ 0.96
USB1-209ENST00000564387 STAP2Q9UGK3 403 aa21.02■□□□□ 0.96
USB1-209ENST00000564387 ANGEL1Q9UNK9 670 aaKnown RBP21.02■□□□□ 0.96
USB1-209ENST00000564387 ATRNL1Q5VV63 1379 aa21.01■□□□□ 0.95
USB1-209ENST00000564387 SLC10A3P09131 477 aa21.01■□□□□ 0.95
USB1-209ENST00000564387 PDE6AP16499 860 aa21.01■□□□□ 0.95
USB1-209ENST00000564387 NUCB1Q02818 461 aa21.01■□□□□ 0.95
USB1-209ENST00000564387 TCP10Q12799 353 aa21.01■□□□□ 0.95
USB1-209ENST00000564387 SH3BP5LQ7L8J4 393 aa21.01■□□□□ 0.95
USB1-209ENST00000564387 AATFQ9NY61 560 aaKnown RBP eCLIP21.01■□□□□ 0.95
USB1-209ENST00000564387 FZD1Q9UP38 647 aa21.01■□□□□ 0.95
USB1-209ENST00000564387 MX1P20591 662 aa21■□□□□ 0.95
USB1-209ENST00000564387 ZNF157P51786 506 aaPredicted RBP21■□□□□ 0.95
USB1-209ENST00000564387 NOGQ13253 232 aa21■□□□□ 0.95
USB1-209ENST00000564387 TTLL12Q14166 644 aaPredicted RBP21■□□□□ 0.95
USB1-209ENST00000564387 SLC9C2Q5TAH2 1124 aa21■□□□□ 0.95
USB1-209ENST00000564387 SH3RF3Q8TEJ3 882 aaPredicted RBP21■□□□□ 0.95
USB1-209ENST00000564387 NOL10Q9BSC4 688 aaKnown RBP21■□□□□ 0.95
USB1-209ENST00000564387 GLRX3O76003 335 aaKnown RBP20.99■□□□□ 0.95
USB1-209ENST00000564387 IREB2P48200 963 aaKnown RBP20.99■□□□□ 0.95
USB1-209ENST00000564387 PRKG1Q13976 671 aa20.99■□□□□ 0.95
USB1-209ENST00000564387 TSHZ3Q63HK5 1081 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms