RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 GTF3C2Q8WUA4 911 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-205ENST00000563283 NUDT16Q96DE0 195 aaKnown RBP7.42□□□□□ -1.22
CNOT1-205ENST00000563283 SIN3AQ96ST3 1273 aa7.42□□□□□ -1.22
CNOT1-205ENST00000563283 ABI2Q9NYB9 513 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-205ENST00000563283 AMOTL2Q9Y2J4 779 aa7.42□□□□□ -1.22
CNOT1-205ENST00000563283 PIK3R4Q99570 1358 aa7.42□□□□□ -1.22
CNOT1-205ENST00000563283 PIK3C2GO75747 1445 aa7.42□□□□□ -1.22
CNOT1-205ENST00000563283 KIF4AO95239 1232 aa7.41□□□□□ -1.22
CNOT1-205ENST00000563283 RPLP1P05386 114 aaKnown RBP7.41□□□□□ -1.22
CNOT1-205ENST00000563283 HYAL2Q12891 473 aa7.41□□□□□ -1.22
CNOT1-205ENST00000563283 RSPO4Q2I0M5 234 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-205ENST00000563283 NOM1Q5C9Z4 860 aaKnown RBP7.41□□□□□ -1.22
CNOT1-205ENST00000563283 COL13A1Q5TAT6 717 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-205ENST00000563283 TTC39BQ5VTQ0 682 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-205ENST00000563283 TXNRD3Q86VQ6 643 aa7.41□□□□□ -1.22
CNOT1-205ENST00000563283 NKTRP30414 1462 aaKnown RBP7.41□□□□□ -1.22
CNOT1-205ENST00000563283 MPSTP25325 297 aa7.4□□□□□ -1.22
CNOT1-205ENST00000563283 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
CNOT1-205ENST00000563283 TMEM132EQ6IEE7 984 aa7.4□□□□□ -1.22
CNOT1-205ENST00000563283 PHLDB3Q6NSJ2 640 aa7.4□□□□□ -1.22
CNOT1-205ENST00000563283 CACTIN-AS1Q8N1I8 211 aa7.4□□□□□ -1.22
CNOT1-205ENST00000563283 EDEM1Q92611 657 aa7.4□□□□□ -1.22
CNOT1-205ENST00000563283 C14orf93Q9H972 538 aaKnown RBP7.4□□□□□ -1.22
CNOT1-205ENST00000563283 ROBO2Q9HCK4 1378 aa7.4□□□□□ -1.22
CNOT1-205ENST00000563283 MYOM2P54296 1465 aa7.4□□□□□ -1.22
CNOT1-205ENST00000563283 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.4□□□□□ -1.23
CNOT1-205ENST00000563283 NALCNQ8IZF0 1738 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 PRAG1Q86YV5 1406 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 DEAF1O75398 565 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-205ENST00000563283 PDGFAP04085 211 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 ITGB7P26010 798 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 EIF1AXP47813 144 aaKnown RBP7.39□□□□□ -1.23
CNOT1-205ENST00000563283 GDF6Q6KF10 455 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-205ENST00000563283 XKR5Q6UX68 686 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 ERICH6Q7L0X2 663 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 ZNF438Q7Z4V0 828 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 IL22RA1Q8N6P7 574 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 ELP3Q9H9T3 547 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 SRA1Q9HD15 236 aaKnown RBP7.39□□□□□ -1.23
CNOT1-205ENST00000563283 TMEM63CQ9P1W3 806 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 TRIM33Q9UPN9 1127 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 MTMR7Q9Y216 660 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 USTQ9Y2C2 406 aa7.39□□□□□ -1.23
CNOT1-205ENST00000563283 ADGRB1O14514 1584 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 CARNS1A5YM72 827 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 DLL1O00548 723 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 CYP2E1P05181 493 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-205ENST00000563283 PCSK2P16519 638 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 NPR3P17342 541 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 MZF1P28698 734 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-205ENST00000563283 PIP4K2BP78356 416 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 ALKBH2Q6NS38 261 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 CCER1Q8TC90 406 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-205ENST00000563283 DCAF11Q8TEB1 546 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 SPACA7Q96KW9 195 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 SEMA6BQ9H3T3 888 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 USP21Q9UK80 565 aa7.38□□□□□ -1.23
CNOT1-205ENST00000563283 PLEKHH1Q9ULM0 1364 aa7.37□□□□□ -1.23
CNOT1-205ENST00000563283 HSPA1LP34931 641 aa7.37□□□□□ -1.23
CNOT1-205ENST00000563283 ATP11AP98196 1134 aa7.37□□□□□ -1.23
CNOT1-205ENST00000563283 DNM1Q05193 864 aaKnown RBP7.37□□□□□ -1.23
CNOT1-205ENST00000563283 MTMR3Q13615 1198 aa7.37□□□□□ -1.23
CNOT1-205ENST00000563283 IGF2-ASQ6U949 168 aa7.37□□□□□ -1.23
CNOT1-205ENST00000563283 WAPLQ7Z5K2 1190 aa7.37□□□□□ -1.23
CNOT1-205ENST00000563283 MAP4K3Q8IVH8 894 aa7.37□□□□□ -1.23
CNOT1-205ENST00000563283 SSBP4Q9BWG4 385 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-205ENST00000563283 NCOA3Q9Y6Q9 1424 aa7.36□□□□□ -1.23
CNOT1-205ENST00000563283 LRPPRCP42704 1394 aaKnown RBP7.36□□□□□ -1.23
CNOT1-205ENST00000563283 KNDC1Q76NI1 1749 aa7.36□□□□□ -1.23
CNOT1-205ENST00000563283 DYRK3O43781 588 aa7.36□□□□□ -1.23
CNOT1-205ENST00000563283 TOM1O60784 492 aa7.36□□□□□ -1.23
CNOT1-205ENST00000563283 SMNDC1O75940 238 aaKnown RBP eCLIP7.36□□□□□ -1.23
CNOT1-205ENST00000563283 SF3B2Q13435 895 aaKnown RBP7.36□□□□□ -1.23
CNOT1-205ENST00000563283 CEP120Q8N960 986 aa7.36□□□□□ -1.23
CNOT1-205ENST00000563283 MUC3BQ9H195 1237 aa7.36□□□□□ -1.23
CNOT1-205ENST00000563283 GGNBP2Q9H3C7 697 aa7.36□□□□□ -1.23
CNOT1-205ENST00000563283 C19orf44Q9H6X5 657 aa7.36□□□□□ -1.23
CNOT1-205ENST00000563283 CNTN3Q9P232 1028 aa7.36□□□□□ -1.23
CNOT1-205ENST00000563283 STK26Q9P289 416 aa7.36□□□□□ -1.23
CNOT1-205ENST00000563283 TECPR2O15040 1411 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 YTHDC2Q9H6S0 1430 aaKnown RBP7.35□□□□□ -1.23
CNOT1-205ENST00000563283 ABCC11Q96J66 1382 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 ROBO1Q9Y6N7 1651 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 FAM13AO94988 1023 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 H2AFB1P0C5Y9 115 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 H2AFB2P0C5Z0 115 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 SETDB1Q15047 1291 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 CEP135Q66GS9 1140 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 WFDC12Q8WWY7 111 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 RASSF4Q9H2L5 321 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 KANSL3Q9P2N6 904 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 PTCH1Q13635 1447 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 FAM135BQ49AJ0 1406 aa7.35□□□□□ -1.23
CNOT1-205ENST00000563283 LAMC1P11047 1609 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 NOS3P29474 1203 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 NBPF8Q3BBV2 869 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 C8orf34Q49A92 452 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 B4GALNT3Q6L9W6 998 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 NCAPG2Q86XI2 1143 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 C1orf127Q8N9H9 656 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms