RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 A0A0A0MRY4 1105 aa8.75□□□□□ -1.01
CHD9-205ENST00000562785 GNB5O14775 395 aa8.75□□□□□ -1.01
CHD9-205ENST00000562785 IGSF3O75054 1194 aa8.75□□□□□ -1.01
CHD9-205ENST00000562785 ADAM11O75078 769 aa8.75□□□□□ -1.01
CHD9-205ENST00000562785 LORP23490 312 aaPredicted RBP8.75□□□□□ -1.01
CHD9-205ENST00000562785 SEPT6Q14141 434 aa8.75□□□□□ -1.01
CHD9-205ENST00000562785 FOXD4L6Q3SYB3 417 aaPredicted RBP8.75□□□□□ -1.01
CHD9-205ENST00000562785 FOXD4L3Q6VB84 417 aaPredicted RBP8.75□□□□□ -1.01
CHD9-205ENST00000562785 FAM196AQ6ZSG2 479 aa8.75□□□□□ -1.01
CHD9-205ENST00000562785 FBXO11Q86XK2 927 aa8.75□□□□□ -1.01
CHD9-205ENST00000562785 FMR1NBQ8N0W7 255 aaPredicted RBP8.75□□□□□ -1.01
CHD9-205ENST00000562785 SPATA32Q96LK8 384 aa8.75□□□□□ -1.01
CHD9-205ENST00000562785 CORO1BQ9BR76 489 aa8.75□□□□□ -1.01
CHD9-205ENST00000562785 LRRC3Q9BY71 257 aa8.75□□□□□ -1.01
CHD9-205ENST00000562785 PIK3R2O00459 728 aa8.74□□□□□ -1.01
CHD9-205ENST00000562785 ECEL1O95672 775 aa8.74□□□□□ -1.01
CHD9-205ENST00000562785 F13A1P00488 732 aa8.74□□□□□ -1.01
CHD9-205ENST00000562785 MAOBP27338 520 aa8.74□□□□□ -1.01
CHD9-205ENST00000562785 CD68P34810 354 aaPredicted RBP8.74□□□□□ -1.01
CHD9-205ENST00000562785 BNC2Q6ZN30 1099 aaPredicted RBP8.74□□□□□ -1.01
CHD9-205ENST00000562785 GATAD2BQ8WXI9 593 aa8.74□□□□□ -1.01
CHD9-205ENST00000562785 DRC1Q96MC2 740 aa8.74□□□□□ -1.01
CHD9-205ENST00000562785 MKL2Q9ULH7 1088 aa8.74□□□□□ -1.01
CHD9-205ENST00000562785 ROBO2Q9HCK4 1378 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 LOC100289279A0A1B0GTE1 492 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 FAM221AA4D161 298 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 SPDYE3A6NKU9 549 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 DLL1O00548 723 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 CTSBP07858 339 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 NLRP12P59046 1061 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 RAC1P63000 192 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 ARID5AQ03989 594 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 MAP1SQ66K74 1059 aaPredicted RBP8.73□□□□□ -1.01
CHD9-205ENST00000562785 KCNB2Q92953 911 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 USP26Q9BXU7 913 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 UBP1Q9NZI7 540 aa8.73□□□□□ -1.01
CHD9-205ENST00000562785 CILPO75339 1184 aa8.72□□□□□ -1.01
CHD9-205ENST00000562785 ATF4P18848 351 aaPredicted RBP8.72□□□□□ -1.01
CHD9-205ENST00000562785 DNAJA1P31689 397 aaKnown RBP8.72□□□□□ -1.01
CHD9-205ENST00000562785 CRKP46108 304 aa8.72□□□□□ -1.01
CHD9-205ENST00000562785 PTPN11Q06124 597 aaPredicted RBP8.72□□□□□ -1.01
CHD9-205ENST00000562785 MPRIPQ6WCQ1 1025 aa8.72□□□□□ -1.01
CHD9-205ENST00000562785 VPS37DQ86XT2 251 aa8.72□□□□□ -1.01
CHD9-205ENST00000562785 PLVAPQ9BX97 442 aa8.72□□□□□ -1.01
CHD9-205ENST00000562785 TANGO6Q9C0B7 1094 aa8.72□□□□□ -1.01
CHD9-205ENST00000562785 CCDC86Q9H6F5 360 aaKnown RBP8.72□□□□□ -1.01
CHD9-205ENST00000562785 KCNK4Q9NYG8 393 aa8.72□□□□□ -1.01
CHD9-205ENST00000562785 USP35Q9P2H5 1018 aa8.72□□□□□ -1.01
CHD9-205ENST00000562785 PRKAG2Q9UGJ0 569 aa8.72□□□□□ -1.01
CHD9-205ENST00000562785 DDX3YO15523 660 aaKnown RBP8.71□□□□□ -1.02
CHD9-205ENST00000562785 FGRP09769 529 aa8.71□□□□□ -1.02
CHD9-205ENST00000562785 HNRNPUQ00839 825 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHD9-205ENST00000562785 APOBRQ0VD83 1088 aa8.71□□□□□ -1.02
CHD9-205ENST00000562785 COL9A2Q14055 689 aaPredicted RBP8.71□□□□□ -1.02
CHD9-205ENST00000562785 MPP2Q14168 576 aa8.71□□□□□ -1.02
CHD9-205ENST00000562785 HP1BP3Q5SSJ5 553 aaPredicted RBP8.71□□□□□ -1.02
CHD9-205ENST00000562785 SLITRK4Q8IW52 837 aa8.71□□□□□ -1.02
CHD9-205ENST00000562785 ZSCAN1Q8NBB4 408 aa8.71□□□□□ -1.02
CHD9-205ENST00000562785 GPBAR1Q8TDU6 330 aa8.71□□□□□ -1.02
CHD9-205ENST00000562785 JARID2Q92833 1246 aaPredicted RBP8.71□□□□□ -1.02
CHD9-205ENST00000562785 SEC16BQ96JE7 1060 aa8.71□□□□□ -1.02
CHD9-205ENST00000562785 ZC3H12CQ9C0D7 883 aaKnown RBP8.71□□□□□ -1.02
CHD9-205ENST00000562785 RSF1Q96T23 1441 aaPredicted RBP8.71□□□□□ -1.02
CHD9-205ENST00000562785 CECR2Q9BXF3 1484 aa8.7□□□□□ -1.02
CHD9-205ENST00000562785 DIEXFQ68CQ4 756 aaKnown RBP8.7□□□□□ -1.02
CHD9-205ENST00000562785 FBXO27Q8NI29 283 aa8.7□□□□□ -1.02
CHD9-205ENST00000562785 UBASH3BQ8TF42 649 aa8.7□□□□□ -1.02
CHD9-205ENST00000562785 MROH2BQ7Z745 1585 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 ZNF862O60290 1169 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 DLGAP3O95886 979 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 SELPP16109 830 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 SOX9P48436 509 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 PDE3AQ14432 1141 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 KIF4BQ2VIQ3 1234 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 MCF2L2Q86YR7 1114 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 NKD1Q969G9 470 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 ACSBG1Q96GR2 724 aa8.69□□□□□ -1.02
CHD9-205ENST00000562785 NOP53Q9NZM5 478 aaKnown RBP8.69□□□□□ -1.02
CHD9-205ENST00000562785 TLR3O15455 904 aaKnown RBP8.68□□□□□ -1.02
CHD9-205ENST00000562785 BPNT1O95861 308 aa8.68□□□□□ -1.02
CHD9-205ENST00000562785 ELNP15502 786 aa8.68□□□□□ -1.02
CHD9-205ENST00000562785 RPL6Q02878 288 aaKnown RBP8.68□□□□□ -1.02
CHD9-205ENST00000562785 TRIM28Q13263 835 aaKnown RBP8.68□□□□□ -1.02
CHD9-205ENST00000562785 CWF19L2Q2TBE0 894 aaKnown RBP8.68□□□□□ -1.02
CHD9-205ENST00000562785 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.68□□□□□ -1.02
CHD9-205ENST00000562785 REC114Q7Z4M0 266 aa8.68□□□□□ -1.02
CHD9-205ENST00000562785 PODNQ7Z5L7 613 aa8.68□□□□□ -1.02
CHD9-205ENST00000562785 UBXN4Q92575 508 aa8.68□□□□□ -1.02
CHD9-205ENST00000562785 GINM1Q9NU53 330 aa8.68□□□□□ -1.02
CHD9-205ENST00000562785 EFR3BQ9Y2G0 817 aa8.68□□□□□ -1.02
CHD9-205ENST00000562785 SYNGAP1Q96PV0 1343 aa8.68□□□□□ -1.02
CHD9-205ENST00000562785 WISP1O95388 367 aa8.67□□□□□ -1.02
CHD9-205ENST00000562785 DUOXA2Q1HG44 320 aa8.67□□□□□ -1.02
CHD9-205ENST00000562785 SEZ6Q53EL9 994 aa8.67□□□□□ -1.02
CHD9-205ENST00000562785 ARMC5Q96C12 935 aa8.67□□□□□ -1.02
CHD9-205ENST00000562785 WDR89Q96FK6 387 aaPredicted RBP8.67□□□□□ -1.02
CHD9-205ENST00000562785 WDR18Q9BV38 432 aa8.67□□□□□ -1.02
CHD9-205ENST00000562785 PCDHA4Q9UN74 947 aa8.67□□□□□ -1.02
CHD9-205ENST00000562785 PCDHGC5Q9Y5F6 944 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms