RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 CERS3Q8IU89 383 aa16.69■□□□□ 0.26
SPG7-206ENST00000562775 NOL10Q9BSC4 688 aaKnown RBP16.69■□□□□ 0.26
SPG7-206ENST00000562775 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
SPG7-206ENST00000562775 ALDH8A1Q9H2A2 487 aaPredicted RBP16.69■□□□□ 0.26
SPG7-206ENST00000562775 MYH2Q9UKX2 1941 aa16.69■□□□□ 0.26
SPG7-206ENST00000562775 TDO2P48775 406 aa16.68■□□□□ 0.26
SPG7-206ENST00000562775 CERS5Q8N5B7 392 aa16.68■□□□□ 0.26
SPG7-206ENST00000562775 SDR42E1Q8WUS8 393 aa16.68■□□□□ 0.26
SPG7-206ENST00000562775 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
SPG7-206ENST00000562775 GAKO14976 1311 aa16.68■□□□□ 0.26
SPG7-206ENST00000562775 AK2P54819 239 aa16.68■□□□□ 0.26
SPG7-206ENST00000562775 ATP8A2Q9NTI2 1148 aa16.68■□□□□ 0.26
SPG7-206ENST00000562775 GPR75-ASB3A0A0A6YYF3 556 aa16.67■□□□□ 0.26
SPG7-206ENST00000562775 USP17L3A6NCW0 530 aa16.67■□□□□ 0.26
SPG7-206ENST00000562775 USP17L4A6NCW7 530 aa16.67■□□□□ 0.26
SPG7-206ENST00000562775 DACT2Q5SW24 774 aa16.67■□□□□ 0.26
SPG7-206ENST00000562775 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
SPG7-206ENST00000562775 USP17L1Q7RTZ2 530 aa16.67■□□□□ 0.26
SPG7-206ENST00000562775 LARGE2Q8N3Y3 721 aa16.67■□□□□ 0.26
SPG7-206ENST00000562775 TMX3Q96JJ7 454 aa16.67■□□□□ 0.26
SPG7-206ENST00000562775 KCNQ5Q9NR82 932 aa16.67■□□□□ 0.26
SPG7-206ENST00000562775 SCN9AQ15858 1988 aa16.67■□□□□ 0.26
SPG7-206ENST00000562775 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
SPG7-206ENST00000562775 ANKRD1Q15327 319 aa16.66■□□□□ 0.26
SPG7-206ENST00000562775 NCOA7Q8NI08 942 aa16.66■□□□□ 0.26
SPG7-206ENST00000562775 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
SPG7-206ENST00000562775 TTF2Q9UNY4 1162 aaKnown RBP16.66■□□□□ 0.26
SPG7-206ENST00000562775 LIMCH1Q9UPQ0 1083 aa16.66■□□□□ 0.26
SPG7-206ENST00000562775 BCS1LQ9Y276 419 aa16.66■□□□□ 0.26
SPG7-206ENST00000562775 YDJCA8MPS7 323 aa16.65■□□□□ 0.26
SPG7-206ENST00000562775 HSP90AA1P07900 732 aaKnown RBP16.65■□□□□ 0.26
SPG7-206ENST00000562775 PLCG2P16885 1265 aa16.65■□□□□ 0.26
SPG7-206ENST00000562775 BTDP43251 543 aa16.65■□□□□ 0.26
SPG7-206ENST00000562775 FER1L6Q2WGJ9 1857 aa16.65■□□□□ 0.26
SPG7-206ENST00000562775 SPRYD3Q8NCJ5 442 aa16.65■□□□□ 0.26
SPG7-206ENST00000562775 MXD3Q9BW11 206 aa16.65■□□□□ 0.26
SPG7-206ENST00000562775 NBPF3Q9H094 633 aa16.65■□□□□ 0.26
SPG7-206ENST00000562775 TAOK3Q9H2K8 898 aa16.65■□□□□ 0.26
SPG7-206ENST00000562775 DCP1AQ9NPI6 582 aaPredicted RBP16.65■□□□□ 0.26
SPG7-206ENST00000562775 ZNF646O15015 1829 aaPredicted RBP16.64■□□□□ 0.26
SPG7-206ENST00000562775 F8W031 263 aaPredicted RBP16.64■□□□□ 0.25
SPG7-206ENST00000562775 IARSP41252 1262 aaKnown RBP16.64■□□□□ 0.25
SPG7-206ENST00000562775 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
SPG7-206ENST00000562775 TRDNQ13061 729 aa16.64■□□□□ 0.25
SPG7-206ENST00000562775 HHIPL2Q6UWX4 724 aa16.64■□□□□ 0.25
SPG7-206ENST00000562775 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
SPG7-206ENST00000562775 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
SPG7-206ENST00000562775 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
SPG7-206ENST00000562775 NLGN2Q8NFZ4 835 aa16.64■□□□□ 0.25
SPG7-206ENST00000562775 SH3RF3Q8TEJ3 882 aaPredicted RBP16.64■□□□□ 0.25
SPG7-206ENST00000562775 MRIQ9BWK5 157 aa16.64■□□□□ 0.25
SPG7-206ENST00000562775 ANAPC4Q9UJX5 808 aa16.64■□□□□ 0.25
SPG7-206ENST00000562775 DAGLAQ9Y4D2 1042 aa16.64■□□□□ 0.25
SPG7-206ENST00000562775 PPARAQ07869 468 aa16.64■□□□□ 0.25
SPG7-206ENST00000562775 CUL4AQ13619 759 aa16.64■□□□□ 0.25
SPG7-206ENST00000562775 ZSCAN31Q96LW9 406 aaPredicted RBP16.64■□□□□ 0.25
SPG7-206ENST00000562775 TCEANC2Q96MN5 208 aa16.64■□□□□ 0.25
SPG7-206ENST00000562775 SLKQ9H2G2 1235 aaPredicted RBP16.64■□□□□ 0.25
SPG7-206ENST00000562775 TIAM2Q8IVF5 1701 aa16.63■□□□□ 0.25
SPG7-206ENST00000562775 MCM5P33992 734 aa16.63■□□□□ 0.25
SPG7-206ENST00000562775 USP5P45974 858 aa16.63■□□□□ 0.25
SPG7-206ENST00000562775 HDLBPQ00341 1268 aaKnown RBP16.63■□□□□ 0.25
SPG7-206ENST00000562775 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
SPG7-206ENST00000562775 TOB2Q14106 344 aaPredicted RBP16.63■□□□□ 0.25
SPG7-206ENST00000562775 AKNAD1Q5T1N1 836 aa16.63■□□□□ 0.25
SPG7-206ENST00000562775 MB21D2Q8IYB1 491 aaPredicted RBP16.63■□□□□ 0.25
SPG7-206ENST00000562775 RNF41Q9H4P4 317 aaPredicted RBP16.63■□□□□ 0.25
SPG7-206ENST00000562775 PSME4Q14997 1843 aa16.63■□□□□ 0.25
SPG7-206ENST00000562775 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 LTBP3Q9NS15 1303 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 MINDY4BA8MYZ0 360 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 USP17L12C9JPN9 530 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 USP17L21D6R901 530 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 NFKBIEO00221 500 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 RHBDL3P58872 404 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 SBK1Q52WX2 424 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 CTR9Q6PD62 1173 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 MFSD6Q6ZSS7 791 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 Q6ZUG5 572 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 NIM1KQ8IY84 436 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 STAG1Q8WVM7 1258 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 TEKT1Q969V4 418 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 AGXT2Q9BYV1 514 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 CNNM2Q9H8M5 875 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 SH2B1Q9NRF2 756 aaPredicted RBP16.62■□□□□ 0.25
SPG7-206ENST00000562775 ARPP21Q9UBL0 812 aaPredicted RBP16.62■□□□□ 0.25
SPG7-206ENST00000562775 MKRN1Q9UHC7 482 aaKnown RBP16.62■□□□□ 0.25
SPG7-206ENST00000562775 ZNRF3Q9ULT6 936 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 BAZ2AQ9UIF9 1905 aaKnown RBP16.62■□□□□ 0.25
SPG7-206ENST00000562775 ARFGEF1Q9Y6D6 1849 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 MYO3BQ8WXR4 1341 aa16.62■□□□□ 0.25
SPG7-206ENST00000562775 COL4A5P29400 1685 aa16.61■□□□□ 0.25
SPG7-206ENST00000562775 SCNN1DP51172 638 aa16.61■□□□□ 0.25
SPG7-206ENST00000562775 KIAA0825Q8IV33 1275 aa16.61■□□□□ 0.25
SPG7-206ENST00000562775 FBXL16Q8N461 479 aa16.61■□□□□ 0.25
SPG7-206ENST00000562775 INTS4Q96HW7 963 aaKnown RBP16.61■□□□□ 0.25
SPG7-206ENST00000562775 VIL1P09327 827 aaKnown RBP16.6■□□□□ 0.25
SPG7-206ENST00000562775 CRKP46108 304 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 FGD1P98174 961 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 TEX11Q8IYF3 940 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms