RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 P2RX7Q99572 595 aaKnown RBP8.53□□□□□ -1.04
TCF4-213ENST00000562543 BDP1A6H8Y1 2624 aa8.53□□□□□ -1.04
TCF4-213ENST00000562543 SRGNP10124 158 aa8.52□□□□□ -1.05
TCF4-213ENST00000562543 HIRAP54198 1017 aaPredicted RBP8.52□□□□□ -1.05
TCF4-213ENST00000562543 KDF1Q8NAX2 398 aaPredicted RBP8.52□□□□□ -1.05
TCF4-213ENST00000562543 JDP2Q8WYK2 163 aa8.52□□□□□ -1.05
TCF4-213ENST00000562543 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.52□□□□□ -1.05
TCF4-213ENST00000562543 R3HDMLQ9H3Y0 253 aa8.52□□□□□ -1.05
TCF4-213ENST00000562543 NARFQ9UHQ1 456 aa8.52□□□□□ -1.05
TCF4-213ENST00000562543 CDV3Q9UKY7 258 aaKnown RBP8.52□□□□□ -1.05
TCF4-213ENST00000562543 SOS1Q07889 1333 aaPredicted RBP8.52□□□□□ -1.05
TCF4-213ENST00000562543 CENPJQ9HC77 1338 aaPredicted RBP8.52□□□□□ -1.05
TCF4-213ENST00000562543 RTL1A6NKG5 1358 aa8.51□□□□□ -1.05
TCF4-213ENST00000562543 WTIPA6NIX2 430 aaPredicted RBP8.51□□□□□ -1.05
TCF4-213ENST00000562543 ERVH48-1M5A8F1 160 aa8.51□□□□□ -1.05
TCF4-213ENST00000562543 PRR5LQ6MZQ0 368 aa8.51□□□□□ -1.05
TCF4-213ENST00000562543 OLFM4Q6UX06 510 aa8.51□□□□□ -1.05
TCF4-213ENST00000562543 SV2AQ7L0J3 742 aa8.51□□□□□ -1.05
TCF4-213ENST00000562543 USP48Q86UV5 1035 aa8.51□□□□□ -1.05
TCF4-213ENST00000562543 RTKN2Q8IZC4 609 aa8.51□□□□□ -1.05
TCF4-213ENST00000562543 MASTLQ96GX5 879 aa8.51□□□□□ -1.05
TCF4-213ENST00000562543 CUEDC1Q9NWM3 386 aaPredicted RBP8.51□□□□□ -1.05
TCF4-213ENST00000562543 NR2E3Q9Y5X4 410 aa8.51□□□□□ -1.05
TCF4-213ENST00000562543 POLR2AP24928 1970 aaKnown RBP8.51□□□□□ -1.05
TCF4-213ENST00000562543 SCN7AQ01118 1682 aa8.5□□□□□ -1.05
TCF4-213ENST00000562543 LILRA1O75019 489 aa8.5□□□□□ -1.05
TCF4-213ENST00000562543 FOXD4L5Q5VV16 416 aaPredicted RBP8.5□□□□□ -1.05
TCF4-213ENST00000562543 INTS5Q6P9B9 1019 aaKnown RBP8.5□□□□□ -1.05
TCF4-213ENST00000562543 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
TCF4-213ENST00000562543 STAP2Q9UGK3 403 aa8.5□□□□□ -1.05
TCF4-213ENST00000562543 HCN4Q9Y3Q4 1203 aa8.5□□□□□ -1.05
TCF4-213ENST00000562543 COL15A1P39059 1388 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 NCAPD2Q15021 1401 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 SLURP2P0DP57 97 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 BMP8BP34820 402 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 IRS1P35568 1242 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 TM4SF4P48230 202 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 SH3D19Q5HYK7 790 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 PPP2R2DQ66LE6 453 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 UBE2Q1Q7Z7E8 422 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 TRPM4Q8TD43 1214 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 SHISA4Q96DD7 197 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 PSMD1Q99460 953 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 ZNF646O15015 1829 aaPredicted RBP8.49□□□□□ -1.05
TCF4-213ENST00000562543 CACNA1GO43497 2377 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 CDHR2Q9BYE9 1310 aa8.49□□□□□ -1.05
TCF4-213ENST00000562543 ARHGEF15O94989 841 aa8.48□□□□□ -1.05
TCF4-213ENST00000562543 SLC4A8Q2Y0W8 1093 aa8.48□□□□□ -1.05
TCF4-213ENST00000562543 DZIP3Q86Y13 1208 aaKnown RBP8.48□□□□□ -1.05
TCF4-213ENST00000562543 HTATIP2Q9BUP3 242 aa8.48□□□□□ -1.05
TCF4-213ENST00000562543 TONSLQ96HA7 1378 aa8.48□□□□□ -1.05
TCF4-213ENST00000562543 BAHCC1Q9P281 2608 aa8.47□□□□□ -1.05
TCF4-213ENST00000562543 ADH1AP07327 375 aa8.47□□□□□ -1.05
TCF4-213ENST00000562543 PTGIRP43119 386 aa8.47□□□□□ -1.05
TCF4-213ENST00000562543 AMPHP49418 695 aa8.47□□□□□ -1.05
TCF4-213ENST00000562543 LYPD4Q6UWN0 246 aa8.47□□□□□ -1.05
TCF4-213ENST00000562543 PRICKLE2Q7Z3G6 844 aa8.47□□□□□ -1.05
TCF4-213ENST00000562543 MAFAQ8NHW3 353 aaPredicted RBP8.47□□□□□ -1.05
TCF4-213ENST00000562543 GDF15Q99988 308 aa8.47□□□□□ -1.05
TCF4-213ENST00000562543 IRS2Q9Y4H2 1338 aa8.47□□□□□ -1.05
TCF4-213ENST00000562543 A0A1W2PP64 1363 aa8.47□□□□□ -1.05
TCF4-213ENST00000562543 ALPK3Q96L96 1907 aa8.46□□□□□ -1.05
TCF4-213ENST00000562543 USP17L8P0C7I0 530 aa8.46□□□□□ -1.06
TCF4-213ENST00000562543 RHOQP17081 205 aa8.46□□□□□ -1.06
TCF4-213ENST00000562543 NBPF20Q3BBV1 942 aa8.46□□□□□ -1.06
TCF4-213ENST00000562543 FAM109BQ6ICB4 259 aaPredicted RBP8.46□□□□□ -1.06
TCF4-213ENST00000562543 DCAF11Q8TEB1 546 aa8.46□□□□□ -1.06
TCF4-213ENST00000562543 MPHOSPH9Q99550 1183 aa8.46□□□□□ -1.06
TCF4-213ENST00000562543 CYLDQ9NQC7 956 aa8.46□□□□□ -1.06
TCF4-213ENST00000562543 GPSM3Q9Y4H4 160 aa8.46□□□□□ -1.06
TCF4-213ENST00000562543 ZFHX4Q86UP3 3567 aa8.46□□□□□ -1.06
TCF4-213ENST00000562543 ADM5C9JUS6 153 aa8.45□□□□□ -1.06
TCF4-213ENST00000562543 PHKG2P15735 406 aa8.45□□□□□ -1.06
TCF4-213ENST00000562543 GAS6Q14393 721 aa8.45□□□□□ -1.06
TCF4-213ENST00000562543 KRT26Q7Z3Y9 468 aa8.45□□□□□ -1.06
TCF4-213ENST00000562543 EVC2Q86UK5 1308 aa8.45□□□□□ -1.06
TCF4-213ENST00000562543 LAMB1P07942 1786 aa8.45□□□□□ -1.06
TCF4-213ENST00000562543 EDC4Q6P2E9 1401 aaKnown RBP8.45□□□□□ -1.06
TCF4-213ENST00000562543 SSC5DA1L4H1 1573 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 GMPSP49915 693 aaPredicted RBP8.44□□□□□ -1.06
TCF4-213ENST00000562543 MRE11P49959 708 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 CAP1Q01518 475 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 SLC9C1Q4G0N8 1177 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 GPAT2Q6NUI2 795 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 NBPF11Q86T75 865 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 CD99L2Q8TCZ2 262 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 COL26A1Q96A83 441 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 ERO1AQ96HE7 468 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 C1QTNF1Q9BXJ1 281 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 SPG7Q9UQ90 795 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 NPC1L1Q9UHC9 1359 aa8.44□□□□□ -1.06
TCF4-213ENST00000562543 COL2A1P02458 1487 aaPredicted RBP8.44□□□□□ -1.06
TCF4-213ENST00000562543 ESPNB1AK53 854 aa8.43□□□□□ -1.06
TCF4-213ENST00000562543 RNF225M0QZC1 329 aaPredicted RBP8.43□□□□□ -1.06
TCF4-213ENST00000562543 PTCD1O75127 700 aaKnown RBP8.43□□□□□ -1.06
TCF4-213ENST00000562543 FBLN1P23142 703 aa8.43□□□□□ -1.06
TCF4-213ENST00000562543 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
TCF4-213ENST00000562543 TBC1D9BQ66K14 1250 aa8.43□□□□□ -1.06
TCF4-213ENST00000562543 LYSMD3Q7Z3D4 306 aa8.43□□□□□ -1.06
TCF4-213ENST00000562543 IFNL2Q8IZJ0 200 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms